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The map label for this gene is hybA [H]

Identifier: 78355704

GI number: 78355704

Start: 674798

End: 675868

Strand: Reverse

Name: hybA [H]

Synonym: Dde_0657

Alternate gene names: 78355704

Gene position: 675868-674798 (Counterclockwise)

Preceding gene: 78355708

Following gene: 78355703

Centisome position: 18.12

GC content: 60.69

Gene sequence:

>1071_bases
ATGAAGCAACACGACAATACATTATCCCGCGCTCCTTCCGCACGCGGCGCGGTAAACCGCAGAACATTTCTGACCGGCGT
GTGTGCCGCCGGCATGGCTGCCTGCGCATCCGCACTGCCTTCCTCTGCGGATGCGGCGCAGACAGACTCCGCCCCCGCTG
CCGGTACAGCACAGCCCATGGCAACGTTGTTCGATCTGTCCCGCTGCGAAGGCTGCGGCGCCTGCGTCGACGCATGCACG
GAACGCAACGCCCGCAACTACCCGCAGCCACGGCATCCTTTTCCTGCCATGTTTCCCGCCCGTGTCCGGGCGGAGGACTG
GTCGGACAAAAAAGAGGTGACGGACAGACTGACACCCTACAACTGGCTCACAATACAACATGTATCTGTAACATATAAAG
AAAAGACGTACGAACTGCACATTCCACGCCGCTGCATGCACTGCGACAACCCGCTGTGCGCCAATCTGTGCCCGTGGGGG
GCCGCCTACAAAGAAAACTCGGGGACGGTCCGCATTGATGACGATATCTGTCTGGGCGGGGCCAAATGCCGTCAGGTCTG
CCCGTGGGACATTCCCCAGCGCCAGACCGGCGTGGGGCTGTACCTTGACCTGCTGCCGCGATTTGCCGGAAACGGTGTCA
TGTACAAATGCGACCGCTGCCACGACAGCGTAAAACAGGGAGCGCTGCCCGCCTGTGTGGAAGCCTGTCCGCTGGGAGTG
CAGGAATACGGCCCGCGTGACGCAATTATCAGCAAAGCGCGCAAGCTGGCGCAGGCAACTGACGGCTATCTGTACGGACT
GGATGAAGCGGGCGGCACCAGCACCATCTATGTTTCTCCCGTCCCCTTTGAACTGCTGAACACTTCGCTGACCCGCAGTG
CCGGACACCCTGATTTTCCGCCGGTGCAACCCGTACTGCAACCCCAGAAGCACCTTGCGGGAGCCCTGATGGTTGCTCCG
CTGGCGGGCATGGCCGCAGGAGCGTTAAAAATACTCGGGACACTGCGGAAAGATCGTGACTCCGGTCATGCTCCGGCAGC
CGCGCACAATAAGGAACAGGACCATGAATAA

Upstream 100 bases:

>100_bases
AAACAACACATTAGATTACCGGCACGGTTTGTGCTGATGTACCGGCATATCATGCGGCCTGCCGTTGTGCCCGGGCCGTT
CACCCGAACCCCTTATTACC

Downstream 100 bases:

>100_bases
CCCCGCGCCGCAGCACCGGTTCATACGTGTTGTCTGGCCGGCCGCAGTCACGCTGCTGGCTGTGACAGGCATAGCTCAGA
TGCCTGTTTTTAAACGGTAC

Product: Iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKQHDNTLSRAPSARGAVNRRTFLTGVCAAGMAACASALPSSADAAQTDSAPAAGTAQPMATLFDLSRCEGCGACVDACT
ERNARNYPQPRHPFPAMFPARVRAEDWSDKKEVTDRLTPYNWLTIQHVSVTYKEKTYELHIPRRCMHCDNPLCANLCPWG
AAYKENSGTVRIDDDICLGGAKCRQVCPWDIPQRQTGVGLYLDLLPRFAGNGVMYKCDRCHDSVKQGALPACVEACPLGV
QEYGPRDAIISKARKLAQATDGYLYGLDEAGGTSTIYVSPVPFELLNTSLTRSAGHPDFPPVQPVLQPQKHLAGALMVAP
LAGMAAGALKILGTLRKDRDSGHAPAAAHNKEQDHE

Sequences:

>Translated_356_residues
MKQHDNTLSRAPSARGAVNRRTFLTGVCAAGMAACASALPSSADAAQTDSAPAAGTAQPMATLFDLSRCEGCGACVDACT
ERNARNYPQPRHPFPAMFPARVRAEDWSDKKEVTDRLTPYNWLTIQHVSVTYKEKTYELHIPRRCMHCDNPLCANLCPWG
AAYKENSGTVRIDDDICLGGAKCRQVCPWDIPQRQTGVGLYLDLLPRFAGNGVMYKCDRCHDSVKQGALPACVEACPLGV
QEYGPRDAIISKARKLAQATDGYLYGLDEAGGTSTIYVSPVPFELLNTSLTRSAGHPDFPPVQPVLQPQKHLAGALMVAP
LAGMAAGALKILGTLRKDRDSGHAPAAAHNKEQDHE
>Mature_356_residues
MKQHDNTLSRAPSARGAVNRRTFLTGVCAAGMAACASALPSSADAAQTDSAPAAGTAQPMATLFDLSRCEGCGACVDACT
ERNARNYPQPRHPFPAMFPARVRAEDWSDKKEVTDRLTPYNWLTIQHVSVTYKEKTYELHIPRRCMHCDNPLCANLCPWG
AAYKENSGTVRIDDDICLGGAKCRQVCPWDIPQRQTGVGLYLDLLPRFAGNGVMYKCDRCHDSVKQGALPACVEACPLGV
QEYGPRDAIISKARKLAQATDGYLYGLDEAGGTSTIYVSPVPFELLNTSLTRSAGHPDFPPVQPVLQPQKHLAGALMVAP
LAGMAAGALKILGTLRKDRDSGHAPAAAHNKEQDHE

Specific function: Participates in the periplasmic electron-transferring activity of hydrogenase 2 during its catalytic turnover [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1789370, Length=380, Percent_Identity=27.8947368421053, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787872, Length=195, Percent_Identity=29.7435897435897, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787122, Length=195, Percent_Identity=29.2307692307692, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790326, Length=244, Percent_Identity=29.5081967213115, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787749, Length=227, Percent_Identity=29.0748898678414, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI2367345, Length=267, Percent_Identity=27.3408239700375, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI226510944, Length=213, Percent_Identity=27.6995305164319, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787478, Length=154, Percent_Identity=33.1168831168831, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787740, Length=126, Percent_Identity=31.7460317460317, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38388; Mature: 38388

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHDNTLSRAPSARGAVNRRTFLTGVCAAGMAACASALPSSADAAQTDSAPAAGTAQPM
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
ATLFDLSRCEGCGACVDACTERNARNYPQPRHPFPAMFPARVRAEDWSDKKEVTDRLTPY
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCCC
NWLTIQHVSVTYKEKTYELHIPRRCMHCDNPLCANLCPWGAAYKENSGTVRIDDDICLGG
EEEEEEEEEEEEECCEEEEECCHHHHCCCCCHHHCCCCCCCCEECCCCEEEECCCEEECC
AKCRQVCPWDIPQRQTGVGLYLDLLPRFAGNGVMYKCDRCHDSVKQGALPACVEACPLGV
HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCHHHHHHCCCCH
QEYGPRDAIISKARKLAQATDGYLYGLDEAGGTSTIYVSPVPFELLNTSLTRSAGHPDFP
HHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCC
PVQPVLQPQKHLAGALMVAPLAGMAAGALKILGTLRKDRDSGHAPAAAHNKEQDHE
CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQHDNTLSRAPSARGAVNRRTFLTGVCAAGMAACASALPSSADAAQTDSAPAAGTAQPM
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
ATLFDLSRCEGCGACVDACTERNARNYPQPRHPFPAMFPARVRAEDWSDKKEVTDRLTPY
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCCC
NWLTIQHVSVTYKEKTYELHIPRRCMHCDNPLCANLCPWGAAYKENSGTVRIDDDICLGG
EEEEEEEEEEEEECCEEEEECCHHHHCCCCCHHHCCCCCCCCEECCCCEEEECCCEEECC
AKCRQVCPWDIPQRQTGVGLYLDLLPRFAGNGVMYKCDRCHDSVKQGALPACVEACPLGV
HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCHHHHHHCCCCH
QEYGPRDAIISKARKLAQATDGYLYGLDEAGGTSTIYVSPVPFELLNTSLTRSAGHPDFP
HHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCC
PVQPVLQPQKHLAGALMVAPLAGMAAGALKILGTLRKDRDSGHAPAAAHNKEQDHE
CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]