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The map label for this gene is rrf2 [H]

Identifier: 78355694

GI number: 78355694

Start: 666161

End: 666601

Strand: Reverse

Name: rrf2 [H]

Synonym: Dde_0647

Alternate gene names: 78355694

Gene position: 666601-666161 (Counterclockwise)

Preceding gene: 78355695

Following gene: 78355689

Centisome position: 17.87

GC content: 57.14

Gene sequence:

>441_bases
ATGAAGCTTACCACACGAAGCCGTTACGGTACGCGCATGCTGCTCGACATCGCCATGCATACCCATGGTGACGATCAGCC
GGTTTCCATCAAGGAAATCGCTGACCGGCAGGGCATATCCATGAAGTACCTTGAAAAGCTTATCAGGGTATTGAAGGGTG
CCGGCTACATCTCCAGCAGACTGGGATCCAAGGGCGGCTACATGCTGGCCAGGCCGCCGGAATCCATCCTGCTGGGCGAT
GTCGTTTTCGCTCTGGAGGAAACGGTTCCCACCTTTGAATGTGTGGACCCCGAACCGTGCTGCCCCCGCATGGACTACTG
CCTGACCAGAACCATCTGGAACGAAGCGGCCAAGGCCATGTATGAAAAGCTGAATTCGTTCACGCTGGCAGACCTGATCA
ACGACGCGGAGCTGTGCCCCAAACAGGGGCAGGCCTGCTGA

Upstream 100 bases:

>100_bases
CCGCAGACGACGAATAACAACAACAGGGGCGGAAGCAGACGCTTCCGCCCCGTTTCGCTCCCCGTGATGCCCCGTGCATC
CGCATCCACGCAGGATACCC

Downstream 100 bases:

>100_bases
ACGCGTCCGCAACGCACATACCGCAATAAAAGCGGTCTGCCATCAGGCAGACCGCTTTTTCAGTACCGGCACAATCCCCC
CGGATGCCCCGGCCGACGCT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKLTTRSRYGTRMLLDIAMHTHGDDQPVSIKEIADRQGISMKYLEKLIRVLKGAGYISSRLGSKGGYMLARPPESILLGD
VVFALEETVPTFECVDPEPCCPRMDYCLTRTIWNEAAKAMYEKLNSFTLADLINDAELCPKQGQAC

Sequences:

>Translated_146_residues
MKLTTRSRYGTRMLLDIAMHTHGDDQPVSIKEIADRQGISMKYLEKLIRVLKGAGYISSRLGSKGGYMLARPPESILLGD
VVFALEETVPTFECVDPEPCCPRMDYCLTRTIWNEAAKAMYEKLNSFTLADLINDAELCPKQGQAC
>Mature_146_residues
MKLTTRSRYGTRMLLDIAMHTHGDDQPVSIKEIADRQGISMKYLEKLIRVLKGAGYISSRLGSKGGYMLARPPESILLGD
VVFALEETVPTFECVDPEPCCPRMDYCLTRTIWNEAAKAMYEKLNSFTLADLINDAELCPKQGQAC

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=144, Percent_Identity=35.4166666666667, Blast_Score=93, Evalue=6e-21,
Organism=Escherichia coli, GI1790621, Length=137, Percent_Identity=31.3868613138686, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16337; Mature: 16337

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTTRSRYGTRMLLDIAMHTHGDDQPVSIKEIADRQGISMKYLEKLIRVLKGAGYISSR
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
LGSKGGYMLARPPESILLGDVVFALEETVPTFECVDPEPCCPRMDYCLTRTIWNEAAKAM
CCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH
YEKLNSFTLADLINDAELCPKQGQAC
HHHHHCHHHHHHHCHHHHCCCCCCCC
>Mature Secondary Structure
MKLTTRSRYGTRMLLDIAMHTHGDDQPVSIKEIADRQGISMKYLEKLIRVLKGAGYISSR
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
LGSKGGYMLARPPESILLGDVVFALEETVPTFECVDPEPCCPRMDYCLTRTIWNEAAKAM
CCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH
YEKLNSFTLADLINDAELCPKQGQAC
HHHHHCHHHHHHHCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]