Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78355462

Identifier: 78355462

GI number: 78355462

Start: 412015

End: 414006

Strand: Reverse

Name: 78355462

Synonym: Dde_0415

Alternate gene names: NA

Gene position: 414006-412015 (Counterclockwise)

Preceding gene: 78355463

Following gene: 78355459

Centisome position: 11.1

GC content: 61.7

Gene sequence:

>1992_bases
ATGAACGTCTACATTTTTTTCCACATGAATCTCATGTTCTCTTCCGTACCCGAATCCATGCGTACGGAGCTGGTCAGGCG
ATGCTATACGCCGCTGCTTGATCTGGCGGAAGAGGGCTGCTTTCCGCTGGGCATCGAAGCTTCCGGGCTGACCCTTGAAC
TGCTGCACGACTGCTGCCCCCGATGGGTCAGCCGGCTGGCGGGGCTGGTCCGCGACGGCGCGTGCGAATTCATCGGCTCC
GGCTATGCCCAGATCATCGGCCCCCTTAATCCGGCCAGTGTCAACATGCACAACCTGCGTCTGGGCAACAGCGTCTACAG
CTCGCTGCTGGGCGTAACGCCGCGGCTGGCGCTGGTCAACGAACAGGCCTTTTCTCCGGGCCTTGTGCCTTTGTACCGTG
CTGCCGGCTACACGGGCATCATCATGGAATGGGAAAACGCACGGCAGGCGCACCCGCACTGGGAGCACCATCTGCAGGCC
GCCCCCCAGCGGGTTGCGGGCACGCGGGGTGAAAGCATGGATCTGCTGTGGAATCATTCACTGCCCTTTCAGCAGTTTCA
GCGCGCCGTGCACGACGAAGTCACGCCGGAAGAATATCTGGAGGGCCTGCGAAACCGGACCGGTACGGACGCCGCCTTGT
GTCTGTACGGCAATGATGCGGAAATTTTCGACTTCCGTCCGGGAAGGTTCTGCACCGAACCCGAACTGACCGGACGCAGC
GAATGGCAGACCATCCGGGACCTGCTGTGCGCCGTGCGCGCCCTGCCGGGCGTCCGGCCCGTGCTGCCCTCGCAGGCGCT
GAAAAACACCATGCCGCAGCGTCCGGCACTGCTGCATCTGGAAAGCCCCGCACAACCCGTCCCTGTAAAAAAGCAGGCCA
AATACAACATCACCCGCTGGGGTGTGACCGGCGTGGACGACACCGGAGCAAACACGCTGTGCAGACGCCTTGCACGGCAT
TTCGCCGCCTGCGAAGGCAAAAACGCATCAGACCGGCCGGACAGCCCTGCACAAAGCGGGCATGACAGCCTCTGGAAAGA
GCTTGTCTACCTGTGCTCAAGCGACTTCCGCACGCACATCGTACCGGAACGGTGGCAGGCATTCCGCCAGCGGCTGCTGG
CATTTTATGAGACCCACATGCCGCATATGCCCGCCGGAGACGCGCTGCCCGCCACCTGTACCGTGCCCCCCCAGCGCGTG
CCCGCCGCCAACCGCCTGCTGAAACTGGAAACACCCCATACAGCCATCACGCTCAACCGCAACCGCGGGCTGGCCGTACA
GGCGCTGCGGTTCGGCGGCGTAAATACACTGCCCGTAGCGGGCACGCTGGCACTGGGCACATATGACGACATGGCGCTGG
GGGCTGATTTCTATTCGGGACATGTGACATTTGAAATGCCCGGCGAACCCAAAGCCACTGATCTTGTGCCCGTGGTGCCC
CGCATAACTGAAACAGCGCGGACAATCCGCGTGGAAACGCAGATCAGCCGCGCTCCGCTGCTCCTGCATAAAAGCATCAC
GCTGTATAAAGACACCCCCCGTGCGGACATACGCTACCGCTTCGGCGCTCCCCTGCCTGCGGGCAGCCTGCGGCTGGGGT
ACATCACCCTTACGCCGCAGTCCTATGACCGGCGCACGCTGCGTTATGCCACCCACAACGGCGGAACCGAACCGGAAGAA
CATCTTTTGTACGGCAGCAGCACAGACCACGGCAGAGCTGTATCGTTTCTGGTTTCGGCGTCATGCGCCGCCGGTATGAC
AGAAGGTACGGCGGAATTCGGCGACGCCCGCCACGGACTGCGCATCACACTGACCGGAGATTCGGCCGCTGCGCTGTGCA
TGGTGACCTACCGCGAAGCTTCTCCGTCTTTTTTTGCCAGAATCATGTTCTCGCTGCAGGAAGTGGATGACACGTCACGT
TTCGGCAACGGTGTGCGCAAGGTCATACCAGCTCCCTGTTTTTCATTCAGCATAACCCCTTACAACCGCTGA

Upstream 100 bases:

>100_bases
GCCTGTATTATCTGTGGGTGCTGTGCGGTACGCAGCGGTGCAGCATCATTGCCGACGACCCCGCCCACGCCTGGATACAC
GGGCTGACCTGATCGCCGCC

Downstream 100 bases:

>100_bases
ACAACACAGGCCCACCGCTGCGCCGCAAAAAAACAGGCCTCAACAGCGCCCGCAGCACACCGGAAAGCAGGTCGGCAGTC
ACACGAGGATCACACGAAAT

Product: alpha amylase domain-containing protein

Products: NA

Alternate protein names: Alpha Amylase Domain-Containing Protein; Glycoside Hydrolase Family; Alpha Amylase Domain Protein

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MNVYIFFHMNLMFSSVPESMRTELVRRCYTPLLDLAEEGCFPLGIEASGLTLELLHDCCPRWVSRLAGLVRDGACEFIGS
GYAQIIGPLNPASVNMHNLRLGNSVYSSLLGVTPRLALVNEQAFSPGLVPLYRAAGYTGIIMEWENARQAHPHWEHHLQA
APQRVAGTRGESMDLLWNHSLPFQQFQRAVHDEVTPEEYLEGLRNRTGTDAALCLYGNDAEIFDFRPGRFCTEPELTGRS
EWQTIRDLLCAVRALPGVRPVLPSQALKNTMPQRPALLHLESPAQPVPVKKQAKYNITRWGVTGVDDTGANTLCRRLARH
FAACEGKNASDRPDSPAQSGHDSLWKELVYLCSSDFRTHIVPERWQAFRQRLLAFYETHMPHMPAGDALPATCTVPPQRV
PAANRLLKLETPHTAITLNRNRGLAVQALRFGGVNTLPVAGTLALGTYDDMALGADFYSGHVTFEMPGEPKATDLVPVVP
RITETARTIRVETQISRAPLLLHKSITLYKDTPRADIRYRFGAPLPAGSLRLGYITLTPQSYDRRTLRYATHNGGTEPEE
HLLYGSSTDHGRAVSFLVSASCAAGMTEGTAEFGDARHGLRITLTGDSAAALCMVTYREASPSFFARIMFSLQEVDDTSR
FGNGVRKVIPAPCFSFSITPYNR

Sequences:

>Translated_663_residues
MNVYIFFHMNLMFSSVPESMRTELVRRCYTPLLDLAEEGCFPLGIEASGLTLELLHDCCPRWVSRLAGLVRDGACEFIGS
GYAQIIGPLNPASVNMHNLRLGNSVYSSLLGVTPRLALVNEQAFSPGLVPLYRAAGYTGIIMEWENARQAHPHWEHHLQA
APQRVAGTRGESMDLLWNHSLPFQQFQRAVHDEVTPEEYLEGLRNRTGTDAALCLYGNDAEIFDFRPGRFCTEPELTGRS
EWQTIRDLLCAVRALPGVRPVLPSQALKNTMPQRPALLHLESPAQPVPVKKQAKYNITRWGVTGVDDTGANTLCRRLARH
FAACEGKNASDRPDSPAQSGHDSLWKELVYLCSSDFRTHIVPERWQAFRQRLLAFYETHMPHMPAGDALPATCTVPPQRV
PAANRLLKLETPHTAITLNRNRGLAVQALRFGGVNTLPVAGTLALGTYDDMALGADFYSGHVTFEMPGEPKATDLVPVVP
RITETARTIRVETQISRAPLLLHKSITLYKDTPRADIRYRFGAPLPAGSLRLGYITLTPQSYDRRTLRYATHNGGTEPEE
HLLYGSSTDHGRAVSFLVSASCAAGMTEGTAEFGDARHGLRITLTGDSAAALCMVTYREASPSFFARIMFSLQEVDDTSR
FGNGVRKVIPAPCFSFSITPYNR
>Mature_663_residues
MNVYIFFHMNLMFSSVPESMRTELVRRCYTPLLDLAEEGCFPLGIEASGLTLELLHDCCPRWVSRLAGLVRDGACEFIGS
GYAQIIGPLNPASVNMHNLRLGNSVYSSLLGVTPRLALVNEQAFSPGLVPLYRAAGYTGIIMEWENARQAHPHWEHHLQA
APQRVAGTRGESMDLLWNHSLPFQQFQRAVHDEVTPEEYLEGLRNRTGTDAALCLYGNDAEIFDFRPGRFCTEPELTGRS
EWQTIRDLLCAVRALPGVRPVLPSQALKNTMPQRPALLHLESPAQPVPVKKQAKYNITRWGVTGVDDTGANTLCRRLARH
FAACEGKNASDRPDSPAQSGHDSLWKELVYLCSSDFRTHIVPERWQAFRQRLLAFYETHMPHMPAGDALPATCTVPPQRV
PAANRLLKLETPHTAITLNRNRGLAVQALRFGGVNTLPVAGTLALGTYDDMALGADFYSGHVTFEMPGEPKATDLVPVVP
RITETARTIRVETQISRAPLLLHKSITLYKDTPRADIRYRFGAPLPAGSLRLGYITLTPQSYDRRTLRYATHNGGTEPEE
HLLYGSSTDHGRAVSFLVSASCAAGMTEGTAEFGDARHGLRITLTGDSAAALCMVTYREASPSFFARIMFSLQEVDDTSR
FGNGVRKVIPAPCFSFSITPYNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73415; Mature: 73415

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVYIFFHMNLMFSSVPESMRTELVRRCYTPLLDLAEEGCFPLGIEASGLTLELLHDCCP
CEEEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
RWVSRLAGLVRDGACEFIGSGYAQIIGPLNPASVNMHNLRLGNSVYSSLLGVTPRLALVN
HHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEC
EQAFSPGLVPLYRAAGYTGIIMEWENARQAHPHWEHHLQAAPQRVAGTRGESMDLLWNHS
CCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCHHHHCCCCCCCEEEEECCC
LPFQQFQRAVHDEVTPEEYLEGLRNRTGTDAALCLYGNDAEIFDFRPGRFCTEPELTGRS
CCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCH
EWQTIRDLLCAVRALPGVRPVLPSQALKNTMPQRPALLHLESPAQPVPVKKQAKYNITRW
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEC
GVTGVDDTGANTLCRRLARHFAACEGKNASDRPDSPAQSGHDSLWKELVYLCSSDFRTHI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
VPERWQAFRQRLLAFYETHMPHMPAGDALPATCTVPPQRVPAANRLLKLETPHTAITLNR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCEEEEEEC
NRGLAVQALRFGGVNTLPVAGTLALGTYDDMALGADFYSGHVTFEMPGEPKATDLVPVVP
CCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHCCCEECCEEEEECCCCCCCCCCCCCCH
RITETARTIRVETQISRAPLLLHKSITLYKDTPRADIRYRFGAPLPAGSLRLGYITLTPQ
HHHHHHHEEEEEEHHCCCCEEEECCEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCC
SYDRRTLRYATHNGGTEPEEHLLYGSSTDHGRAVSFLVSASCAAGMTEGTAEFGDARHGL
CCCCCEEEEEECCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCE
RITLTGDSAAALCMVTYREASPSFFARIMFSLQEVDDTSRFGNGVRKVIPAPCFSFSITP
EEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCC
YNR
CCC
>Mature Secondary Structure
MNVYIFFHMNLMFSSVPESMRTELVRRCYTPLLDLAEEGCFPLGIEASGLTLELLHDCCP
CEEEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
RWVSRLAGLVRDGACEFIGSGYAQIIGPLNPASVNMHNLRLGNSVYSSLLGVTPRLALVN
HHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEC
EQAFSPGLVPLYRAAGYTGIIMEWENARQAHPHWEHHLQAAPQRVAGTRGESMDLLWNHS
CCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCHHHHCCCCCCCEEEEECCC
LPFQQFQRAVHDEVTPEEYLEGLRNRTGTDAALCLYGNDAEIFDFRPGRFCTEPELTGRS
CCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCH
EWQTIRDLLCAVRALPGVRPVLPSQALKNTMPQRPALLHLESPAQPVPVKKQAKYNITRW
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEC
GVTGVDDTGANTLCRRLARHFAACEGKNASDRPDSPAQSGHDSLWKELVYLCSSDFRTHI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
VPERWQAFRQRLLAFYETHMPHMPAGDALPATCTVPPQRVPAANRLLKLETPHTAITLNR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCEEEEEEC
NRGLAVQALRFGGVNTLPVAGTLALGTYDDMALGADFYSGHVTFEMPGEPKATDLVPVVP
CCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHCCCEECCEEEEECCCCCCCCCCCCCCH
RITETARTIRVETQISRAPLLLHKSITLYKDTPRADIRYRFGAPLPAGSLRLGYITLTPQ
HHHHHHHEEEEEEHHCCCCEEEECCEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCC
SYDRRTLRYATHNGGTEPEEHLLYGSSTDHGRAVSFLVSASCAAGMTEGTAEFGDARHGL
CCCCCEEEEEECCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCE
RITLTGDSAAALCMVTYREASPSFFARIMFSLQEVDDTSRFGNGVRKVIPAPCFSFSITP
EEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCC
YNR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA