| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355387
Identifier: 78355387
GI number: 78355387
Start: 330058
End: 330540
Strand: Reverse
Name: 78355387
Synonym: Dde_0340
Alternate gene names: NA
Gene position: 330540-330058 (Counterclockwise)
Preceding gene: 78355388
Following gene: 78355385
Centisome position: 8.86
GC content: 54.45
Gene sequence:
>483_bases ATGACCCAAGAACTTCACAGGCCGGCACCCGTTGCCTATTCCAGTGACGAGGTGATCCGCAACTTTACCGCTGTGCTCGG TTCGTATTCCTTTATACAGGAAATGCGGACCCTGCGCGTGGGCAGACTGCAGTTCCGCCGCCGAAAAAAAGTGCTGCGCG AATTCACAGCGCTGTTTATCGCGCTGTGGAATCTTGCGCTGCACAAGTCCTTTCCCGACGATGCAGAGCTGATCTTTGAC GAGTTCATCAGCAGGCTTGCCAACCATTGCAGCCAGTCCAGCAAAAACACAAAGCTGCTCTGGCAGCAGATACAGGTGTA CCAGACGCTGCTCGAAGCAAGAAAAGACAGTGACTTCACCGAGATTGCCGCTTTTATCACCGGTCAGCTGGAAACAGACA GCACCGAACAGCTGCGGACAAAACACCGCCTTGCGCTGCTGATCCGAGGCGCCTACAGCATCATCTTCGACAGGCTGATC TGA
Upstream 100 bases:
>100_bases ACAGGCGGCAGCCGGTAATGAACAGCAGGACAGCGATCCGCGGCCCAAAAGACGCAGAAGACGCAGGAAGCCCGCCAGCT CTGAATAAAACGACTACGCC
Downstream 100 bases:
>100_bases CAGGCACCCGCATCTGAAAATGCACAGGCCGGAAGGGATACTACTTCCGGCCTGTTTTTTTCACCCGCAGTCACACATCC GCTGCGGCGCCCGCCATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTQELHRPAPVAYSSDEVIRNFTAVLGSYSFIQEMRTLRVGRLQFRRRKKVLREFTALFIALWNLALHKSFPDDAELIFD EFISRLANHCSQSSKNTKLLWQQIQVYQTLLEARKDSDFTEIAAFITGQLETDSTEQLRTKHRLALLIRGAYSIIFDRLI
Sequences:
>Translated_160_residues MTQELHRPAPVAYSSDEVIRNFTAVLGSYSFIQEMRTLRVGRLQFRRRKKVLREFTALFIALWNLALHKSFPDDAELIFD EFISRLANHCSQSSKNTKLLWQQIQVYQTLLEARKDSDFTEIAAFITGQLETDSTEQLRTKHRLALLIRGAYSIIFDRLI >Mature_159_residues TQELHRPAPVAYSSDEVIRNFTAVLGSYSFIQEMRTLRVGRLQFRRRKKVLREFTALFIALWNLALHKSFPDDAELIFDE FISRLANHCSQSSKNTKLLWQQIQVYQTLLEARKDSDFTEIAAFITGQLETDSTEQLRTKHRLALLIRGAYSIIFDRLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18696; Mature: 18565
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQELHRPAPVAYSSDEVIRNFTAVLGSYSFIQEMRTLRVGRLQFRRRKKVLREFTALFI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALWNLALHKSFPDDAELIFDEFISRLANHCSQSSKNTKLLWQQIQVYQTLLEARKDSDFT HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHH EIAAFITGQLETDSTEQLRTKHRLALLIRGAYSIIFDRLI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TQELHRPAPVAYSSDEVIRNFTAVLGSYSFIQEMRTLRVGRLQFRRRKKVLREFTALFI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALWNLALHKSFPDDAELIFDEFISRLANHCSQSSKNTKLLWQQIQVYQTLLEARKDSDFT HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHH EIAAFITGQLETDSTEQLRTKHRLALLIRGAYSIIFDRLI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA