| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78355194
Identifier: 78355194
GI number: 78355194
Start: 135982
End: 136710
Strand: Reverse
Name: 78355194
Synonym: Dde_0147
Alternate gene names: NA
Gene position: 136710-135982 (Counterclockwise)
Preceding gene: 78355200
Following gene: 78355189
Centisome position: 3.66
GC content: 52.67
Gene sequence:
>729_bases ATGATCCGCAAAGCTATACTATTTACGCTGCTTTCGTTTTTATGCGCTGTATCGGCACCTCAGGCGCAAATCATCACTTT TGACGATCCGGACCTGTCTGCCTGGCGCGTTGACCGTGGTGCAACTCTCGACATGCAGGTCGTCAGTTTTGACGGAGACA ACAGGCTGCAGATCAACATCGGCCCTCCTAAGCCGGAAGAATCATTTTACACCTATCAAGGCTACGCGCATCAGGTTGAC GGCAAGTTCCCCACAAGCTCCATTTACGGCGATCTTTACCTTGATTCCCAATGGGATCATGCCAATGTCGGCATATGGGG AGTTGTCCGCAAGCCTCAGGAAAGCACGCTGGCCTATCCCCTGCTGGCCTGGCAGACAGGCCCGGACACTGAAGCGGGCT TTTACACATGGAACACCTTTGAGGACCGCTGGGATCTCGTTTCTCAGGCCGATTATGCTCTGGACGCATGGCACACCATA CGCATGACACATACCGATGACACCATGTCATACTATGTGGACGAGAACCTCATCTACACACAGGATCTGTACGACTATGC AGGCTGGGAACTCCAAAGCATCATTTTGAACTCGAGAAACTACGGCAACTCATATACCGCCATGTGGGACAACGTCGGGA CAGCACCAACGCCCACACCGGAACCGTCCACAATGGCCCTCATGACGCTCGGATTTGCAGGGGTATTTTTCTGGAAACGC AGAAGGTAA
Upstream 100 bases:
>100_bases CACACATTCCATAACATTTGACAATACCATACAAGAACATCTCCGGCATAATTTTTTCATATCTCCTTGAGCGTTACCTA CAGACAACCAAGGAGTTGGC
Downstream 100 bases:
>100_bases CAGAGCCGCAGGCGCCCCCTTCCGCAAACGGGACACAATGACTCTTCACTACAAAAGCCCGGCAGCATGCTGCCGGGCTT CATCGTTTTCATAGTGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MIRKAILFTLLSFLCAVSAPQAQIITFDDPDLSAWRVDRGATLDMQVVSFDGDNRLQINIGPPKPEESFYTYQGYAHQVD GKFPTSSIYGDLYLDSQWDHANVGIWGVVRKPQESTLAYPLLAWQTGPDTEAGFYTWNTFEDRWDLVSQADYALDAWHTI RMTHTDDTMSYYVDENLIYTQDLYDYAGWELQSIILNSRNYGNSYTAMWDNVGTAPTPTPEPSTMALMTLGFAGVFFWKR RR
Sequences:
>Translated_242_residues MIRKAILFTLLSFLCAVSAPQAQIITFDDPDLSAWRVDRGATLDMQVVSFDGDNRLQINIGPPKPEESFYTYQGYAHQVD GKFPTSSIYGDLYLDSQWDHANVGIWGVVRKPQESTLAYPLLAWQTGPDTEAGFYTWNTFEDRWDLVSQADYALDAWHTI RMTHTDDTMSYYVDENLIYTQDLYDYAGWELQSIILNSRNYGNSYTAMWDNVGTAPTPTPEPSTMALMTLGFAGVFFWKR RR >Mature_242_residues MIRKAILFTLLSFLCAVSAPQAQIITFDDPDLSAWRVDRGATLDMQVVSFDGDNRLQINIGPPKPEESFYTYQGYAHQVD GKFPTSSIYGDLYLDSQWDHANVGIWGVVRKPQESTLAYPLLAWQTGPDTEAGFYTWNTFEDRWDLVSQADYALDAWHTI RMTHTDDTMSYYVDENLIYTQDLYDYAGWELQSIILNSRNYGNSYTAMWDNVGTAPTPTPEPSTMALMTLGFAGVFFWKR RR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27714; Mature: 27714
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKAILFTLLSFLCAVSAPQAQIITFDDPDLSAWRVDRGATLDMQVVSFDGDNRLQINI CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCEEEEEEEEECCCCEEEEEE GPPKPEESFYTYQGYAHQVDGKFPTSSIYGDLYLDSQWDHANVGIWGVVRKPQESTLAYP CCCCCCCCEEEECCEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEE LLAWQTGPDTEAGFYTWNTFEDRWDLVSQADYALDAWHTIRMTHTDDTMSYYVDENLIYT EEEECCCCCCCCCEEEECCCHHHHHHHHHCCCEEECEEEEEEEECCCCEEEEECCCEEEE QDLYDYAGWELQSIILNSRNYGNSYTAMWDNVGTAPTPTPEPSTMALMTLGFAGVFFWKR HHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHEEEEEC RR CC >Mature Secondary Structure MIRKAILFTLLSFLCAVSAPQAQIITFDDPDLSAWRVDRGATLDMQVVSFDGDNRLQINI CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCEEEEEEEEECCCCEEEEEE GPPKPEESFYTYQGYAHQVDGKFPTSSIYGDLYLDSQWDHANVGIWGVVRKPQESTLAYP CCCCCCCCEEEECCEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEE LLAWQTGPDTEAGFYTWNTFEDRWDLVSQADYALDAWHTIRMTHTDDTMSYYVDENLIYT EEEECCCCCCCCCEEEECCCHHHHHHHHHCCCEEECEEEEEEEECCCCEEEEECCCEEEE QDLYDYAGWELQSIILNSRNYGNSYTAMWDNVGTAPTPTPEPSTMALMTLGFAGVFFWKR HHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHEEEEEC RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA