| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355188
Identifier: 78355188
GI number: 78355188
Start: 132132
End: 133226
Strand: Reverse
Name: 78355188
Synonym: Dde_0141
Alternate gene names: NA
Gene position: 133226-132132 (Counterclockwise)
Preceding gene: 78355189
Following gene: 78355187
Centisome position: 3.57
GC content: 60.0
Gene sequence:
>1095_bases ATGACCAAACGTATTTGCTCTTTTCTGGCAGCCGTGGCGCTGCTGTTGTGTGCCGCCATGCCCGCCATGGCCGAAGGTAA ACTACGGGTAGCCTTCGCTCTTTTGGGCACCATTGACGACCGCGGCTGGAACACCGCCCATTACAAAGGCATTCAGCAGC TCAAGGAAGCTCTGGGCGACAAGATTGAAATCGCCTACACTGAAAACGTGGGCCCCCAGAATGCCGAACGCGTGCTGCGC AATTATGCACAGCAGGGCTACGACCTCATCTTCGGCACCAGCTTTCCGCACATGGATGCCATCGAGCGTGTTGCAAAAGA CTTCCCTGACATCAAGTTCGAACACTGCTCCGGCTACAAGATGGGCCCGAACCTGAGCAACTATTTCGCACGCATGTATC AGGCCGAATATCTGGCCGGATACACCGCAGGGCTCATGGGGTTCACCCGTGTGGGCACCGTGGGCACGCACCCCATCCCC GAACCCATCCGCGGTATCAACTCCTTTACGCTGGGCCTCATCCGCGGGCTTGAAGAAGCCGGCATCGCCTATGACAAATC CACCCTGAACACCGTGGTCTGGATGAAATCATGGGCCGATCCCATCAAGGAAACCACGCTGGCCGAAACACTGGCCGACC GTGACCACGACCTTATCCGCCAGATGGCCGACACCCCCGAAAGCTCGCTGGCCGCATGCGCCCGCGACCTGCCCGCGGTG GGCTACGGCAGCCCCGCAGAAGAATACGGCGCGGACTGTGTTCTTACCTCCACCGTATTCAACTGGGGCAACTACTACGT GCAGACCGTGCAGTCGGCTCTCGACGGCACATGGCAGGCCCGCTCCTACTGGCGCGGCTTTGACGACGATGCCATCCGCC TGACGGCATTCGGCAGCCATGTTCCCGCCGACGTGCGGGCCAAGGTGGAAGCGCTGCGCGATGAGCTTGCCAAAGGCAAC GACCGCATATTCGCAGGCCCTGTCAAAGACCAGTCCGGCAAGGTCATCATTGCCGAAGGACAGCAGGCTTCGGACGCCGA CCTGCTGGGCATGATGGTTTTCGTTGACGGAGTAAGCGGCAATCTGCCGCAGTAA
Upstream 100 bases:
>100_bases GCAGATTGACAACGGTCAGTTACGGTGCTTTCATATTTTGTTGCGCCCGCTTTCGGGCGATTCCATTTTCTACAGTACGG TCCCGTGAGGAGAAACACTG
Downstream 100 bases:
>100_bases CTCCGCGTCGAAACAGCCATAACGGTTTTCCGGCTCCGGGTCGCATTGCGGCCCGGAGTCTCCTGTTTCCGTACCTTTCA CAGCGTGCCAGACGGGGATG
Product: Bmp family membrane protein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; Basic Membrane Protein Family Protein; ABC Transporter Periplasmic/Surface Lipoprotein; ABC Transporter; ABC Transporter Periplasmic Protein Surface Lipoprotein; Membrane Lipoprotein; Basic Membrane Lipoprotein Family; Transcriptional Activator Of ComK Gene; Tat Pathway Signal Sequence/Basic Membrane Protein; Twin-Arginine Translocation Pathway Signal; Basic Membrane Lipoprotein Family Protein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; Outer Membrane Lipoprotein; ABC-Type Transport Periplasmic Component; Lipoprotein Periplasmic Protein
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTKRICSFLAAVALLLCAAMPAMAEGKLRVAFALLGTIDDRGWNTAHYKGIQQLKEALGDKIEIAYTENVGPQNAERVLR NYAQQGYDLIFGTSFPHMDAIERVAKDFPDIKFEHCSGYKMGPNLSNYFARMYQAEYLAGYTAGLMGFTRVGTVGTHPIP EPIRGINSFTLGLIRGLEEAGIAYDKSTLNTVVWMKSWADPIKETTLAETLADRDHDLIRQMADTPESSLAACARDLPAV GYGSPAEEYGADCVLTSTVFNWGNYYVQTVQSALDGTWQARSYWRGFDDDAIRLTAFGSHVPADVRAKVEALRDELAKGN DRIFAGPVKDQSGKVIIAEGQQASDADLLGMMVFVDGVSGNLPQ
Sequences:
>Translated_364_residues MTKRICSFLAAVALLLCAAMPAMAEGKLRVAFALLGTIDDRGWNTAHYKGIQQLKEALGDKIEIAYTENVGPQNAERVLR NYAQQGYDLIFGTSFPHMDAIERVAKDFPDIKFEHCSGYKMGPNLSNYFARMYQAEYLAGYTAGLMGFTRVGTVGTHPIP EPIRGINSFTLGLIRGLEEAGIAYDKSTLNTVVWMKSWADPIKETTLAETLADRDHDLIRQMADTPESSLAACARDLPAV GYGSPAEEYGADCVLTSTVFNWGNYYVQTVQSALDGTWQARSYWRGFDDDAIRLTAFGSHVPADVRAKVEALRDELAKGN DRIFAGPVKDQSGKVIIAEGQQASDADLLGMMVFVDGVSGNLPQ >Mature_363_residues TKRICSFLAAVALLLCAAMPAMAEGKLRVAFALLGTIDDRGWNTAHYKGIQQLKEALGDKIEIAYTENVGPQNAERVLRN YAQQGYDLIFGTSFPHMDAIERVAKDFPDIKFEHCSGYKMGPNLSNYFARMYQAEYLAGYTAGLMGFTRVGTVGTHPIPE PIRGINSFTLGLIRGLEEAGIAYDKSTLNTVVWMKSWADPIKETTLAETLADRDHDLIRQMADTPESSLAACARDLPAVG YGSPAEEYGADCVLTSTVFNWGNYYVQTVQSALDGTWQARSYWRGFDDDAIRLTAFGSHVPADVRAKVEALRDELAKGND RIFAGPVKDQSGKVIIAEGQQASDADLLGMMVFVDGVSGNLPQ
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39834; Mature: 39702
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRICSFLAAVALLLCAAMPAMAEGKLRVAFALLGTIDDRGWNTAHYKGIQQLKEALGD CCHHHHHHHHHHHHHHHHHCCHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCC KIEIAYTENVGPQNAERVLRNYAQQGYDLIFGTSFPHMDAIERVAKDFPDIKFEHCSGYK CEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCC MGPNLSNYFARMYQAEYLAGYTAGLMGFTRVGTVGTHPIPEPIRGINSFTLGLIRGLEEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GIAYDKSTLNTVVWMKSWADPIKETTLAETLADRDHDLIRQMADTPESSLAACARDLPAV CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCC GYGSPAEEYGADCVLTSTVFNWGNYYVQTVQSALDGTWQARSYWRGFDDDAIRLTAFGSH CCCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECCC VPADVRAKVEALRDELAKGNDRIFAGPVKDQSGKVIIAEGQQASDADLLGMMVFVDGVSG CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHEEECCCC NLPQ CCCC >Mature Secondary Structure TKRICSFLAAVALLLCAAMPAMAEGKLRVAFALLGTIDDRGWNTAHYKGIQQLKEALGD CHHHHHHHHHHHHHHHHHCCHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCC KIEIAYTENVGPQNAERVLRNYAQQGYDLIFGTSFPHMDAIERVAKDFPDIKFEHCSGYK CEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCC MGPNLSNYFARMYQAEYLAGYTAGLMGFTRVGTVGTHPIPEPIRGINSFTLGLIRGLEEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GIAYDKSTLNTVVWMKSWADPIKETTLAETLADRDHDLIRQMADTPESSLAACARDLPAV CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCC GYGSPAEEYGADCVLTSTVFNWGNYYVQTVQSALDGTWQARSYWRGFDDDAIRLTAFGSH CCCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECCC VPADVRAKVEALRDELAKGNDRIFAGPVKDQSGKVIIAEGQQASDADLLGMMVFVDGVSG CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHEEECCCC NLPQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA