Click here to switch to the map view.

The map label for this gene is yufQ [H]

Identifier: 78355184

GI number: 78355184

Start: 127738

End: 128667

Strand: Reverse

Name: yufQ [H]

Synonym: Dde_0137

Alternate gene names: 78355184

Gene position: 128667-127738 (Counterclockwise)

Preceding gene: 78355185

Following gene: 78355183

Centisome position: 3.45

GC content: 59.25

Gene sequence:

>930_bases
ATGATTGAAGATATTGTATTCATCTCAAAAATAGCCATGAAGTCTTCGGTGGCGGTGCTGTTTGCCGCGCTGGGAGAAAT
TTATGCCGAGCGTTCCGGAGTGCTCAATCTGGGAGTTGAAGGCATGATGCTGGTGGGCGCACTATGCGGCGTGGCCGCCG
GACTGGCCACGGGAAACGTGTGGCTGGGCGTGGCCGGCGGCATGCTGGCTGCCGGACTTTTTTCGCTGATACACGCTTTT
TTTTCCATCACGCTGCGCGTCAACCAGACGCTTTCCGGTCTGGCGCTCACCATTCTGGGAGCCGGTCTGGCCAGCTTTCT
GGGACGGGCATACATAGGCAAGGCCGCCCTGCGCATGAAGGTGTGGAACGTTCCCTATCTGCACGACATCCCCGTCGTCG
GAAAAATATTTTTCACGCACACGCCGCTGGTGTATGTAGCCTATGTGCTGCTGCCGCTGGCAGCGTGGGTGCTGCTGCGC
ACCCGCACCGGCCTAAAAATACGCGCCGCGGGCGAAGATGCAGGCTCCGCAGATGCCATGGGTGTCAACGTGGTGCTGCT
GCGCTATCTCTGCACATTTTTCGGCGGCTGCATGGCCGGGCTGGGGGGCGCATATCTTTCCATCGCCTACACCCCCGGCT
GGAAGGAAAACATGACCATGGGACAGGGCTGGGTAGCCATCGCCATGGTCATCTTTGCCACGTGGTACCCGTTCCGCGCG
TTTCTGGGCGCGCTGCTGTTCGGCGGACTCACGGCTCTGCAATTTTATTTTCAGGCGACGGGCATAGAAGTCATTCCCGT
CAATCTGCTGCGCATGTTCCCGTACCTGATAACCATACTGGTGCTTATCGTGGTCATGCGGCTGGACAAAACCAGAGGCA
GAGGCGGCGCACCGGCTTCGCTGGGCGTACCCTTCAGCCGGGAAGGCTAG

Upstream 100 bases:

>100_bases
TTACACCCGCAGCTGCCGCCGGAAATACCGATGCATGACGGCATGCTGTTTCCGGATACGGCAAAAGAGGCAGGCACGAC
TGTCCTGTGCAGGAACAACC

Downstream 100 bases:

>100_bases
CGGCCCCGCGCCGCGTAACAGACACCGCCGCATACAGCGGCTGCCGGAGGACAAACAGACATGAAAAACAATACCATGAA
CACACTTATCGGCGCGGCGC

Product: putative simple sugar transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MIEDIVFISKIAMKSSVAVLFAALGEIYAERSGVLNLGVEGMMLVGALCGVAAGLATGNVWLGVAGGMLAAGLFSLIHAF
FSITLRVNQTLSGLALTILGAGLASFLGRAYIGKAALRMKVWNVPYLHDIPVVGKIFFTHTPLVYVAYVLLPLAAWVLLR
TRTGLKIRAAGEDAGSADAMGVNVVLLRYLCTFFGGCMAGLGGAYLSIAYTPGWKENMTMGQGWVAIAMVIFATWYPFRA
FLGALLFGGLTALQFYFQATGIEVIPVNLLRMFPYLITILVLIVVMRLDKTRGRGGAPASLGVPFSREG

Sequences:

>Translated_309_residues
MIEDIVFISKIAMKSSVAVLFAALGEIYAERSGVLNLGVEGMMLVGALCGVAAGLATGNVWLGVAGGMLAAGLFSLIHAF
FSITLRVNQTLSGLALTILGAGLASFLGRAYIGKAALRMKVWNVPYLHDIPVVGKIFFTHTPLVYVAYVLLPLAAWVLLR
TRTGLKIRAAGEDAGSADAMGVNVVLLRYLCTFFGGCMAGLGGAYLSIAYTPGWKENMTMGQGWVAIAMVIFATWYPFRA
FLGALLFGGLTALQFYFQATGIEVIPVNLLRMFPYLITILVLIVVMRLDKTRGRGGAPASLGVPFSREG
>Mature_309_residues
MIEDIVFISKIAMKSSVAVLFAALGEIYAERSGVLNLGVEGMMLVGALCGVAAGLATGNVWLGVAGGMLAAGLFSLIHAF
FSITLRVNQTLSGLALTILGAGLASFLGRAYIGKAALRMKVWNVPYLHDIPVVGKIFFTHTPLVYVAYVLLPLAAWVLLR
TRTGLKIRAAGEDAGSADAMGVNVVLLRYLCTFFGGCMAGLGGAYLSIAYTPGWKENMTMGQGWVAIAMVIFATWYPFRA
FLGALLFGGLTALQFYFQATGIEVIPVNLLRMFPYLITILVLIVVMRLDKTRGRGGAPASLGVPFSREG

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32886; Mature: 32886

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEDIVFISKIAMKSSVAVLFAALGEIYAERSGVLNLGVEGMMLVGALCGVAAGLATGNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCCCCC
WLGVAGGMLAAGLFSLIHAFFSITLRVNQTLSGLALTILGAGLASFLGRAYIGKAALRMK
CEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VWNVPYLHDIPVVGKIFFTHTPLVYVAYVLLPLAAWVLLRTRTGLKIRAAGEDAGSADAM
ECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
GVNVVLLRYLCTFFGGCMAGLGGAYLSIAYTPGWKENMTMGQGWVAIAMVIFATWYPFRA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FLGALLFGGLTALQFYFQATGIEVIPVNLLRMFPYLITILVLIVVMRLDKTRGRGGAPAS
HHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LGVPFSREG
CCCCCCCCC
>Mature Secondary Structure
MIEDIVFISKIAMKSSVAVLFAALGEIYAERSGVLNLGVEGMMLVGALCGVAAGLATGNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCCCCC
WLGVAGGMLAAGLFSLIHAFFSITLRVNQTLSGLALTILGAGLASFLGRAYIGKAALRMK
CEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VWNVPYLHDIPVVGKIFFTHTPLVYVAYVLLPLAAWVLLRTRTGLKIRAAGEDAGSADAM
ECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
GVNVVLLRYLCTFFGGCMAGLGGAYLSIAYTPGWKENMTMGQGWVAIAMVIFATWYPFRA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FLGALLFGGLTALQFYFQATGIEVIPVNLLRMFPYLITILVLIVVMRLDKTRGRGGAPAS
HHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LGVPFSREG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]