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The map label for this gene is ygbK [C]

Identifier: 78355175

GI number: 78355175

Start: 119627

End: 120910

Strand: Reverse

Name: ygbK [C]

Synonym: Dde_0128

Alternate gene names: 78355175

Gene position: 120910-119627 (Counterclockwise)

Preceding gene: 78355176

Following gene: 78355174

Centisome position: 3.24

GC content: 64.72

Gene sequence:

>1284_bases
ATGACCAGATACGCAGTTATCGCCGACGACCTGACAGGCGCAGGTGACACCGGCGTGCAGTTTGCCAAAGCCGGACTGCG
TACGCGCATTCTGACGCACAACTGGTCGGCGGAAGACCTGAACGGTGTGGACGTGGCCGTGGTGCAGACAGAAAGCCGCG
CCATGCCCCCACAGGAGGCATATGCGGCCGTGAAACAGGCTGCACAGCGGCTGCAGGCGGCCGGAGTACAACCGCTGTAT
AAAAAGGTGGACTCCACTCTGCGCGGGCAGATAGGGCCTGAAATTGATGCGGTCATGGACGTATGGGGGCTGGAACTGGC
CCTCCTGTGTCCGGCATTTCCGGAAAACGGAAGAACTCTCATCGGCGGTTATCTGCTGGCCGGAGGCGAGCCGGTATCAC
GCACCTCCATCGGAGCGGACCCTGTATCGCCCGTACGGCAGAGCCATATCCCCAGCCTGCTTGCCGCTCAGTCCTCGCGT
CCTGCCATAGGGCTTTCGCTGGCAGAAATGACCAGAGGCGACAGTTATCTGGAGAGCATATTCACAGAAGCGCGGCGCAG
GAGCGCCATCATTGTGGCCGATGCAGCAGACCCGCAGGATATTGCCCTGCTGGAAAGCCTTGTGGCCCGCTTTGCCCCGC
GGGCGCTGTTTGTGGGCTCCGCCGGACTTGCCGCTCCGGTGGCGGCCCGTCTGGCACAATCGTCAGCAGGCAGGCGCCCC
GTTGTCACGGTGGTGGGTTCGGTCAACCCCGTATCACGCGGACAGCTGAAGCAGCTGCAGCACGAAGGAACGGGACTGCT
GCTGGTTACCGCCGACGAGCTGCTGCTTGACGACAGGCACTGGCAGACGGCACTGCGCGCCAAGGCCGAGACGCTGGCGG
CCATGCTGCGCCGGGGCGAAGACGTGGCGGTGGCCACACCGGGCAACCGGGAAGAAGTACAGGACCTGCTGGAAAGAGGT
GCCGGCATCGGGCTGGAGCGCCGCCCCCTTACCGCGCGTGTGGCCGCGCGCACCACTCAGGTGGTGCACGAGGCGCTGGC
CTTGCTGCAGGACGGAGAAAAACCGTCCGGCCTTGTGCTCACAGGGGGCGACATGGCCCACGCCATGCTGGCCCACCTGA
ACACGGCAGGCATGGACCTTATTGCCGAAGTCAGCCCCGGCATACCTGTGGGCAGACTCAGCGGAGGACATGCGGACGGC
GTCAAAGTGGTCACCAAAGCAGGCGGCTTCGGCACGCAGGGCGCTCTGGTGCAGGCCGTGCGCACCCTGCGTGAACTGGA
CTGA

Upstream 100 bases:

>100_bases
TTGCAGCGGCGGTGCTGGTAACAGCCATACTGTGCCCGCTGATGACGCACTATATGTGCAAGCGCTATGATGCTGCACAT
CCCCCGCAGGAGCAGCGCGC

Downstream 100 bases:

>100_bases
CAATACAGCCGGGCAGCCCGCCGCTGACGGGGCTGCCCGCCATACCATACAGAACCAAGGAGCAGAGAGTGAAACTGCCT
GTTTTAGCGCTGACCATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MTRYAVIADDLTGAGDTGVQFAKAGLRTRILTHNWSAEDLNGVDVAVVQTESRAMPPQEAYAAVKQAAQRLQAAGVQPLY
KKVDSTLRGQIGPEIDAVMDVWGLELALLCPAFPENGRTLIGGYLLAGGEPVSRTSIGADPVSPVRQSHIPSLLAAQSSR
PAIGLSLAEMTRGDSYLESIFTEARRRSAIIVADAADPQDIALLESLVARFAPRALFVGSAGLAAPVAARLAQSSAGRRP
VVTVVGSVNPVSRGQLKQLQHEGTGLLLVTADELLLDDRHWQTALRAKAETLAAMLRRGEDVAVATPGNREEVQDLLERG
AGIGLERRPLTARVAARTTQVVHEALALLQDGEKPSGLVLTGGDMAHAMLAHLNTAGMDLIAEVSPGIPVGRLSGGHADG
VKVVTKAGGFGTQGALVQAVRTLRELD

Sequences:

>Translated_427_residues
MTRYAVIADDLTGAGDTGVQFAKAGLRTRILTHNWSAEDLNGVDVAVVQTESRAMPPQEAYAAVKQAAQRLQAAGVQPLY
KKVDSTLRGQIGPEIDAVMDVWGLELALLCPAFPENGRTLIGGYLLAGGEPVSRTSIGADPVSPVRQSHIPSLLAAQSSR
PAIGLSLAEMTRGDSYLESIFTEARRRSAIIVADAADPQDIALLESLVARFAPRALFVGSAGLAAPVAARLAQSSAGRRP
VVTVVGSVNPVSRGQLKQLQHEGTGLLLVTADELLLDDRHWQTALRAKAETLAAMLRRGEDVAVATPGNREEVQDLLERG
AGIGLERRPLTARVAARTTQVVHEALALLQDGEKPSGLVLTGGDMAHAMLAHLNTAGMDLIAEVSPGIPVGRLSGGHADG
VKVVTKAGGFGTQGALVQAVRTLRELD
>Mature_426_residues
TRYAVIADDLTGAGDTGVQFAKAGLRTRILTHNWSAEDLNGVDVAVVQTESRAMPPQEAYAAVKQAAQRLQAAGVQPLYK
KVDSTLRGQIGPEIDAVMDVWGLELALLCPAFPENGRTLIGGYLLAGGEPVSRTSIGADPVSPVRQSHIPSLLAAQSSRP
AIGLSLAEMTRGDSYLESIFTEARRRSAIIVADAADPQDIALLESLVARFAPRALFVGSAGLAAPVAARLAQSSAGRRPV
VTVVGSVNPVSRGQLKQLQHEGTGLLLVTADELLLDDRHWQTALRAKAETLAAMLRRGEDVAVATPGNREEVQDLLERGA
GIGLERRPLTARVAARTTQVVHEALALLQDGEKPSGLVLTGGDMAHAMLAHLNTAGMDLIAEVSPGIPVGRLSGGHADGV
KVVTKAGGFGTQGALVQAVRTLRELD

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=163, Percent_Identity=33.7423312883436, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 44775; Mature: 44644

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYAVIADDLTGAGDTGVQFAKAGLRTRILTHNWSAEDLNGVDVAVVQTESRAMPPQEA
CCCEEEEECCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCCCCCHHHH
YAAVKQAAQRLQAAGVQPLYKKVDSTLRGQIGPEIDAVMDVWGLELALLCPAFPENGRTL
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
IGGYLLAGGEPVSRTSIGADPVSPVRQSHIPSLLAAQSSRPAIGLSLAEMTRGDSYLESI
EEEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCCCEEEHHHHHCCHHHHHHH
FTEARRRSAIIVADAADPQDIALLESLVARFAPRALFVGSAGLAAPVAARLAQSSAGRRP
HHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCC
VVTVVGSVNPVSRGQLKQLQHEGTGLLLVTADELLLDDRHWQTALRAKAETLAAMLRRGE
EEEEEECCCCCCHHHHHHHHHCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
DVAVATPGNREEVQDLLERGAGIGLERRPLTARVAARTTQVVHEALALLQDGEKPSGLVL
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
TGGDMAHAMLAHLNTAGMDLIAEVSPGIPVGRLSGGHADGVKVVTKAGGFGTQGALVQAV
ECCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
RTLRELD
HHHHHCC
>Mature Secondary Structure 
TRYAVIADDLTGAGDTGVQFAKAGLRTRILTHNWSAEDLNGVDVAVVQTESRAMPPQEA
CCEEEEECCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCCCCCHHHH
YAAVKQAAQRLQAAGVQPLYKKVDSTLRGQIGPEIDAVMDVWGLELALLCPAFPENGRTL
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
IGGYLLAGGEPVSRTSIGADPVSPVRQSHIPSLLAAQSSRPAIGLSLAEMTRGDSYLESI
EEEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCCCEEEHHHHHCCHHHHHHH
FTEARRRSAIIVADAADPQDIALLESLVARFAPRALFVGSAGLAAPVAARLAQSSAGRRP
HHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCC
VVTVVGSVNPVSRGQLKQLQHEGTGLLLVTADELLLDDRHWQTALRAKAETLAAMLRRGE
EEEEEECCCCCCHHHHHHHHHCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
DVAVATPGNREEVQDLLERGAGIGLERRPLTARVAARTTQVVHEALALLQDGEKPSGLVL
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
TGGDMAHAMLAHLNTAGMDLIAEVSPGIPVGRLSGGHADGVKVVTKAGGFGTQGALVQAV
ECCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
RTLRELD
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]