| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355132
Identifier: 78355132
GI number: 78355132
Start: 78289
End: 79518
Strand: Reverse
Name: 78355132
Synonym: Dde_0085
Alternate gene names: NA
Gene position: 79518-78289 (Counterclockwise)
Preceding gene: 78355134
Following gene: 78355130
Centisome position: 2.13
GC content: 59.02
Gene sequence:
>1230_bases ATGTATAGCCGCACATTCTCCCGCCGCGGAATTCTACCCCACTTGCCGCATTGCGCCCGGATGTGTATCCACAACGCACC GGCCCGTTTTCATTTCAGCCGAGGAGTAACCACCATGCCGCTGTCCAAGCCACGCCGCGCCGCTTCCCCGGGCAGGCTTG ACGCTCTTGATGCACTGCGCGCCGTTGCCATTGTCATGGTGGTCTGTATTCATGTGCTGGGCTACTGCCTGCCGCTGCCG CCTGCACAGTATGCCGTGATTTCATTTGTGGTGCAGACCGCCGGTGTCGCCACTTTTTACCTGACAGACGGCTATCTGCT GGCATTCGGCAGGGCTCATAAGGAGCACCACCACCGGCAGTTCATGCAAAAAAGCGCCCGCAGGCTGCTGGTTCCGTGGA TTGCTTTCACGGTGCTGTACACTGCGGCTCGCTATGCCTTCGAGCTTGCCGGGCTGATGGACAATTACGCAATCGCAGGG CGCTCTCCGGCCGAAGTGGCAACCGCGGCATACAGCTCTGTGTACGCTCCGCAGCTGTATTTTCTGGCGTCGCTGTTTCT CATCAGAGCCGTATGCCCCGTTACAGCGGCCCTTATGCTTAAAATGCCTGTGTATGCGGCAGGCGCACTGCTGGCTGCAG GAGTTTGGGCTTTGAACAGCTACGGCATCAGCGGCCTGTTTCCCTTCTCTCTGCTGGCCGGTTTCCCGGGGCAGGAACCG GTTCTCCACGCCGTCCACGGGCTGCAGTTTCATGCCTGCGGCATGCTGCTGTGGCGCCTGCACAACCGTTACGGTCTGCG ACCTCTGGTTCTGACCACCTTTCCCGTTCTGGGCCTCTGCCTGCTTGGTCTCCTTGCAGGCAATCTGCACCTGCCAAGGA TAACGCAATACGCCTATCTGCTTTCACTCTTTTTATTTTTTGCCGCTACCGGCTTCCACCCCGCGCCGTTGCTTTGGCTG GGCAGAAACACCATGGGAATCTACCTGCTCCATACTCCGATAATTCTCAAAGCCGTATCCATGGCTGTGAACCGACTGGT CACCATACCTCTGCTTTCTTTCACACTCATCACATGCGGTGTTGTACTGGCAAGCGTGACGGCAATCCCGCTGTTGCGCC GGTTACCGGCGGGACACCTGCTGCTGGGCGAATATCCACCGGCAAAAAAGCAGGCCGGCCCCCCGACGCCGCGTTCCCGC AGAGAGCCGCAAAGCAACCGGTCCGTTTAA
Upstream 100 bases:
>100_bases CCTGCGATGGTCTGCGGTTCCTGAAGTTACGATGTAATAATGGCCGGTCATGCGCCTGAAGTAAAATTACTATTTACAGC CGCTTTAATTAATCTTGCTA
Downstream 100 bases:
>100_bases ACATGAACAACGCCCCACCAAAAGCGCAGCCCTGACGCCACGGGTAACACCGGCGGGGCCCCGCACAGAGTTCCGTAGAG GACATACCGCCTGCAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MYSRTFSRRGILPHLPHCARMCIHNAPARFHFSRGVTTMPLSKPRRAASPGRLDALDALRAVAIVMVVCIHVLGYCLPLP PAQYAVISFVVQTAGVATFYLTDGYLLAFGRAHKEHHHRQFMQKSARRLLVPWIAFTVLYTAARYAFELAGLMDNYAIAG RSPAEVATAAYSSVYAPQLYFLASLFLIRAVCPVTAALMLKMPVYAAGALLAAGVWALNSYGISGLFPFSLLAGFPGQEP VLHAVHGLQFHACGMLLWRLHNRYGLRPLVLTTFPVLGLCLLGLLAGNLHLPRITQYAYLLSLFLFFAATGFHPAPLLWL GRNTMGIYLLHTPIILKAVSMAVNRLVTIPLLSFTLITCGVVLASVTAIPLLRRLPAGHLLLGEYPPAKKQAGPPTPRSR REPQSNRSV
Sequences:
>Translated_409_residues MYSRTFSRRGILPHLPHCARMCIHNAPARFHFSRGVTTMPLSKPRRAASPGRLDALDALRAVAIVMVVCIHVLGYCLPLP PAQYAVISFVVQTAGVATFYLTDGYLLAFGRAHKEHHHRQFMQKSARRLLVPWIAFTVLYTAARYAFELAGLMDNYAIAG RSPAEVATAAYSSVYAPQLYFLASLFLIRAVCPVTAALMLKMPVYAAGALLAAGVWALNSYGISGLFPFSLLAGFPGQEP VLHAVHGLQFHACGMLLWRLHNRYGLRPLVLTTFPVLGLCLLGLLAGNLHLPRITQYAYLLSLFLFFAATGFHPAPLLWL GRNTMGIYLLHTPIILKAVSMAVNRLVTIPLLSFTLITCGVVLASVTAIPLLRRLPAGHLLLGEYPPAKKQAGPPTPRSR REPQSNRSV >Mature_409_residues MYSRTFSRRGILPHLPHCARMCIHNAPARFHFSRGVTTMPLSKPRRAASPGRLDALDALRAVAIVMVVCIHVLGYCLPLP PAQYAVISFVVQTAGVATFYLTDGYLLAFGRAHKEHHHRQFMQKSARRLLVPWIAFTVLYTAARYAFELAGLMDNYAIAG RSPAEVATAAYSSVYAPQLYFLASLFLIRAVCPVTAALMLKMPVYAAGALLAAGVWALNSYGISGLFPFSLLAGFPGQEP VLHAVHGLQFHACGMLLWRLHNRYGLRPLVLTTFPVLGLCLLGLLAGNLHLPRITQYAYLLSLFLFFAATGFHPAPLLWL GRNTMGIYLLHTPIILKAVSMAVNRLVTIPLLSFTLITCGVVLASVTAIPLLRRLPAGHLLLGEYPPAKKQAGPPTPRSR REPQSNRSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44825; Mature: 44825
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSRTFSRRGILPHLPHCARMCIHNAPARFHFSRGVTTMPLSKPRRAASPGRLDALDALR CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCCCCHHHHHHHH AVAIVMVVCIHVLGYCLPLPPAQYAVISFVVQTAGVATFYLTDGYLLAFGRAHKEHHHRQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHH FMQKSARRLLVPWIAFTVLYTAARYAFELAGLMDNYAIAGRSPAEVATAAYSSVYAPQLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FLASLFLIRAVCPVTAALMLKMPVYAAGALLAAGVWALNSYGISGLFPFSLLAGFPGQEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCH VLHAVHGLQFHACGMLLWRLHNRYGLRPLVLTTFPVLGLCLLGLLAGNLHLPRITQYAYL HHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LSLFLFFAATGFHPAPLLWLGRNTMGIYLLHTPIILKAVSMAVNRLVTIPLLSFTLITCG HHHHHHHHHCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLASVTAIPLLRRLPAGHLLLGEYPPAKKQAGPPTPRSRREPQSNRSV HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYSRTFSRRGILPHLPHCARMCIHNAPARFHFSRGVTTMPLSKPRRAASPGRLDALDALR CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCCCCHHHHHHHH AVAIVMVVCIHVLGYCLPLPPAQYAVISFVVQTAGVATFYLTDGYLLAFGRAHKEHHHRQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHH FMQKSARRLLVPWIAFTVLYTAARYAFELAGLMDNYAIAGRSPAEVATAAYSSVYAPQLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FLASLFLIRAVCPVTAALMLKMPVYAAGALLAAGVWALNSYGISGLFPFSLLAGFPGQEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCH VLHAVHGLQFHACGMLLWRLHNRYGLRPLVLTTFPVLGLCLLGLLAGNLHLPRITQYAYL HHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LSLFLFFAATGFHPAPLLWLGRNTMGIYLLHTPIILKAVSMAVNRLVTIPLLSFTLITCG HHHHHHHHHCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLASVTAIPLLRRLPAGHLLLGEYPPAKKQAGPPTPRSRREPQSNRSV HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA