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The map label for this gene is 78224738

Identifier: 78224738

GI number: 78224738

Start: 3989154

End: 3989501

Strand: Reverse

Name: 78224738

Synonym: Gmet_3555

Alternate gene names: NA

Gene position: 3989501-3989154 (Counterclockwise)

Preceding gene: 78224739

Following gene: 78224737

Centisome position: 99.8

GC content: 59.2

Gene sequence:

>348_bases
ATGCTCGGAATTATCCTTAAATTGATTGTCAACGCAGTGGCCCTCTTTGCCGTGGTCCGCCTGGTTCCCGGCATCAGCAT
CGCCGGTAGCGGTACTCTTTTCCTTGCGGCCCTTGTGCTGGGCTTCCTCAACGCGGTACTCAGGCCCATCATCTCCTTTT
TCACCCTGCCGATCACGGTGCTCACCCTCGGCCTCTTCACCCTCGTGGTGAACGGCGCCGTCTTTGCCCTGGCCGCCTGG
ATCGTCCCGGGATTCAACATCGCCGGCATCGGGAGCGCCATTCTAGGCGCACTCGTCTTCAGCGTCGTCAGTTTCGTGCT
CAATATAATCGTTCGGCCGGTCGAGTGA

Upstream 100 bases:

>100_bases
CGGCCTGGGATGAAGCCCCGCCGGCTTCCCGAGCAACTCATCGGGGCGCTCAGATCTACGAATGGGGCCGGCTAAAAGAC
CGGTAGGGAGACATCACACA

Downstream 100 bases:

>100_bases
AGTCCTGGCCCTGAGGAACCTCATCCGCACCTTGCCATTGGCGGCGCCATCTGCTAGAGTCGACGTCTACCCGCTGCGGA
ATAGCGCGCCGATCACCGAA

Product: membrane hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLGIILKLIVNAVALFAVVRLVPGISIAGSGTLFLAALVLGFLNAVLRPIISFFTLPITVLTLGLFTLVVNGAVFALAAW
IVPGFNIAGIGSAILGALVFSVVSFVLNIIVRPVE

Sequences:

>Translated_115_residues
MLGIILKLIVNAVALFAVVRLVPGISIAGSGTLFLAALVLGFLNAVLRPIISFFTLPITVLTLGLFTLVVNGAVFALAAW
IVPGFNIAGIGSAILGALVFSVVSFVLNIIVRPVE
>Mature_115_residues
MLGIILKLIVNAVALFAVVRLVPGISIAGSGTLFLAALVLGFLNAVLRPIISFFTLPITVLTLGLFTLVVNGAVFALAAW
IVPGFNIAGIGSAILGALVFSVVSFVLNIIVRPVE

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 11872; Mature: 11872

Theoretical pI: Translated: 12.22; Mature: 12.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGIILKLIVNAVALFAVVRLVPGISIAGSGTLFLAALVLGFLNAVLRPIISFFTLPITV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLGLFTLVVNGAVFALAAWIVPGFNIAGIGSAILGALVFSVVSFVLNIIVRPVE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGIILKLIVNAVALFAVVRLVPGISIAGSGTLFLAALVLGFLNAVLRPIISFFTLPITV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLGLFTLVVNGAVFALAAWIVPGFNIAGIGSAILGALVFSVVSFVLNIIVRPVE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8550407; 12000953 [H]