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The map label for this gene is 78224708

Identifier: 78224708

GI number: 78224708

Start: 3957563

End: 3958753

Strand: Reverse

Name: 78224708

Synonym: Gmet_3525

Alternate gene names: NA

Gene position: 3958753-3957563 (Counterclockwise)

Preceding gene: 78224709

Following gene: 78224707

Centisome position: 99.03

GC content: 57.01

Gene sequence:

>1191_bases
ATGAATGTGGCCGAAATGGTACGAAACCTGCTAGTCTTATGCCTTGACGAGTTGTTCATAGCTACTGTTCTCTTGATGGA
GTCATACGTGAAATCACATATCCCCTACATGCGGCGCCGGGTTGTAGCCGTTGCGGCGTGCGGCGTTCTCTTCCTGCTGT
CCGTTCTGCCAGGATGCAAGTTCAACAAGGCACAACAGGAGAGCAGTCGTTCCGTTGAGACGTTGGAGTCAACGGCGATT
GCTGGAAAGAAGACGGTTGCTCCTCCTCCCCAACCAGAAGAGCCACGCTTTAAACCTGTTTCCAGTTCGAGGGTTGCCAC
GCCGAAGAACCGGTACCGGACCGGCGAGAACCCCGAGGTGGCCGCGCAGGCCGGATGGCCCGTGAAGAGCCCCAACCCGT
TGCCGGGGGCGATCCTTCCCGGGAGGCGCATCGTTGCCTATTACGGGAATCCGCTTTCAAAGAAGATGGGGGCGCTGGGC
GAACATCCGAAGGATGACATGCTGCGGCGCTTGAAGGAAGAGGTGTCCCGCTGGGAAAAGGCGGACCCCTCGAAGCCGGT
GCAACCGGCCCTTCATCTTATTGCAGTGGTAGCCCAGGGTGACCCTGGCAAGAGTGGCAAATACCGGATGGTCATGCCGG
ATGACGTGGTGAATCAGGTGCATGAATGGGCACGGGAGGCCAATGCCCTCATGTTTATCGATATCCAGACGGGGCACGAG
AACATCAGGACGCTTCTGCCGCGCTTCGAGTGGCTCCTGAAAAATCCCGACGTTCATCTGGGCATCGATCCTGAATTTAA
CCTTGTCAAAAGCGGGGCGAAGCCGGGGACGAAAATCGGCACCTACGATGCTGCCGATATCAACTACGTCACCGAGTATC
TCAGCCGCCTGGTAAAGACCAATAACCTCCCTCCCAAGGTGCTGACGGTACATCGCTTTACCCGCAACGGCGTCACCAAT
GCACGCAAAATCACCCTCCGGCCCGAAGTGCAGATCGTCATGCACATGGACGGCTGGGGCGCACCTTCGCTGAAGCGCGA
TTCCTATGCCGACTATATCGTGGCAGAGCCGGTCCAGTATACGGGGTTCAAGCTTTTCTACCACAATGACACCAAGAAGG
GAGACCCGATGATGACCCCTCGCGAGGTGCTCATGCTGGATCCGAAGCCCCTGTACGTTCAGTATCAATAA

Upstream 100 bases:

>100_bases
TTCGAGCGCGCCATTTTTACAAGAGGGGTTACGGCAAGAGCCGTAACCCCTCTTCTTTTCAGGCGTGGGGCGCCCACCTG
ACAGCGTGACCGGTTGAGCG

Downstream 100 bases:

>100_bases
CCGACGGAGAGGAACCGGATCGGATGGTTCGCCGTAAAGCCGAGGGAGTGCGGGACGACAGCTACTGGATGGGGAAGGCC
CTGCGAGAAGCGGAAAAGGC

Product: putative lipoprotein

Products: NA

Alternate protein names: SH3 Type 3 Domain Protein; LigA Protein

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNVAEMVRNLLVLCLDELFIATVLLMESYVKSHIPYMRRRVVAVAACGVLFLLSVLPGCKFNKAQQESSRSVETLESTAI
AGKKTVAPPPQPEEPRFKPVSSSRVATPKNRYRTGENPEVAAQAGWPVKSPNPLPGAILPGRRIVAYYGNPLSKKMGALG
EHPKDDMLRRLKEEVSRWEKADPSKPVQPALHLIAVVAQGDPGKSGKYRMVMPDDVVNQVHEWAREANALMFIDIQTGHE
NIRTLLPRFEWLLKNPDVHLGIDPEFNLVKSGAKPGTKIGTYDAADINYVTEYLSRLVKTNNLPPKVLTVHRFTRNGVTN
ARKITLRPEVQIVMHMDGWGAPSLKRDSYADYIVAEPVQYTGFKLFYHNDTKKGDPMMTPREVLMLDPKPLYVQYQ

Sequences:

>Translated_396_residues
MNVAEMVRNLLVLCLDELFIATVLLMESYVKSHIPYMRRRVVAVAACGVLFLLSVLPGCKFNKAQQESSRSVETLESTAI
AGKKTVAPPPQPEEPRFKPVSSSRVATPKNRYRTGENPEVAAQAGWPVKSPNPLPGAILPGRRIVAYYGNPLSKKMGALG
EHPKDDMLRRLKEEVSRWEKADPSKPVQPALHLIAVVAQGDPGKSGKYRMVMPDDVVNQVHEWAREANALMFIDIQTGHE
NIRTLLPRFEWLLKNPDVHLGIDPEFNLVKSGAKPGTKIGTYDAADINYVTEYLSRLVKTNNLPPKVLTVHRFTRNGVTN
ARKITLRPEVQIVMHMDGWGAPSLKRDSYADYIVAEPVQYTGFKLFYHNDTKKGDPMMTPREVLMLDPKPLYVQYQ
>Mature_396_residues
MNVAEMVRNLLVLCLDELFIATVLLMESYVKSHIPYMRRRVVAVAACGVLFLLSVLPGCKFNKAQQESSRSVETLESTAI
AGKKTVAPPPQPEEPRFKPVSSSRVATPKNRYRTGENPEVAAQAGWPVKSPNPLPGAILPGRRIVAYYGNPLSKKMGALG
EHPKDDMLRRLKEEVSRWEKADPSKPVQPALHLIAVVAQGDPGKSGKYRMVMPDDVVNQVHEWAREANALMFIDIQTGHE
NIRTLLPRFEWLLKNPDVHLGIDPEFNLVKSGAKPGTKIGTYDAADINYVTEYLSRLVKTNNLPPKVLTVHRFTRNGVTN
ARKITLRPEVQIVMHMDGWGAPSLKRDSYADYIVAEPVQYTGFKLFYHNDTKKGDPMMTPREVLMLDPKPLYVQYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44446; Mature: 44446

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVAEMVRNLLVLCLDELFIATVLLMESYVKSHIPYMRRRVVAVAACGVLFLLSVLPGCK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC
FNKAQQESSRSVETLESTAIAGKKTVAPPPQPEEPRFKPVSSSRVATPKNRYRTGENPEV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE
AAQAGWPVKSPNPLPGAILPGRRIVAYYGNPLSKKMGALGEHPKDDMLRRLKEEVSRWEK
EECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ADPSKPVQPALHLIAVVAQGDPGKSGKYRMVMPDDVVNQVHEWAREANALMFIDIQTGHE
CCCCCCHHHHHHHHEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCHH
NIRTLLPRFEWLLKNPDVHLGIDPEFNLVKSGAKPGTKIGTYDAADINYVTEYLSRLVKT
HHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
NNLPPKVLTVHRFTRNGVTNARKITLRPEVQIVMHMDGWGAPSLKRDSYADYIVAEPVQY
CCCCCCEEEEEHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCC
TGFKLFYHNDTKKGDPMMTPREVLMLDPKPLYVQYQ
CCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEC
>Mature Secondary Structure
MNVAEMVRNLLVLCLDELFIATVLLMESYVKSHIPYMRRRVVAVAACGVLFLLSVLPGCK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC
FNKAQQESSRSVETLESTAIAGKKTVAPPPQPEEPRFKPVSSSRVATPKNRYRTGENPEV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE
AAQAGWPVKSPNPLPGAILPGRRIVAYYGNPLSKKMGALGEHPKDDMLRRLKEEVSRWEK
EECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ADPSKPVQPALHLIAVVAQGDPGKSGKYRMVMPDDVVNQVHEWAREANALMFIDIQTGHE
CCCCCCHHHHHHHHEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCHH
NIRTLLPRFEWLLKNPDVHLGIDPEFNLVKSGAKPGTKIGTYDAADINYVTEYLSRLVKT
HHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
NNLPPKVLTVHRFTRNGVTNARKITLRPEVQIVMHMDGWGAPSLKRDSYADYIVAEPVQY
CCCCCCEEEEEHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCC
TGFKLFYHNDTKKGDPMMTPREVLMLDPKPLYVQYQ
CCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA