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The map label for this gene is aspC [H]

Identifier: 78224623

GI number: 78224623

Start: 3854628

End: 3855803

Strand: Reverse

Name: aspC [H]

Synonym: Gmet_3433

Alternate gene names: 78224623

Gene position: 3855803-3854628 (Counterclockwise)

Preceding gene: 78224624

Following gene: 78224613

Centisome position: 96.46

GC content: 68.62

Gene sequence:

>1176_bases
ATGAAATTCGCCATTTCCGACCAGATCCGCTCGGTCCACGCACCCCCCATCACCGAGGTGAAGGGGTGGCTCGCCAGCCG
GGAGCCCGATCCAGGGCGTCACCTCATTGATCTCTGCCAGGCGGTGCCCGACTACGCCCCGGCCCGGCAGTTGACCGACT
ACCTGGCGACATGCCTCGACGATCCGGCCATGGCGAAGTATTCCCCCGACGAGGGGCTTCTTGAAGTGCGGGAGGGGGTC
TGTGCCCGCTACGGTCGGGTTTACGGCGCGGCCCCCGCGCCGGAGGGGGTCTGCCTCACCATCGGCGCCAGCCAGGCCTT
CTGGCTCGCCATGGTGACCCTCTGCCGGGCCGGGGACGAGGTGATCGTGCCGCTCCCCGCCTACTTCGACCACCCCATGG
CCCTGGAGATGCTAGGGCTGAGGCCGGTCTGGCTCCCCTTCGACGAGAAGCGGGGGGGCGTCGTGGACCCGGCGGCGGTG
GAGCGGCTCATCACCCCCCGGACCCGGGCGATCCTGCTGGTGACCCCCTCGAACCCCACCGGTGTCGTCACCCCGCCCGA
TGTGATCCACGAACTCTACTCCCTGGCCCGGCGCCGGGGAACCGCCTTGGTCATCGACGAGACCTACGCTGACTTCATCC
CGGGCGGCGCGGCCCCCCACGACCTCTTCGCCGACCCCCACTGGGGGGATCACCTGGTCCAGATCATGTCCTTCGGCAAG
ACCTACGCCCTTACCGGCTACCGTGCCGGGTGCCTCGTGGCGTCCGACGCGTTCATCTCCCATGCCCTCAAGGCCCAAGA
CACCATGGCGGTCTGCCAGCCCCGCATCACCCAGCACGCGGTCCTCTACGGCGTGCGTCACCTCGACGACTGGGTCGCCG
AAAATCGCCTCATGATGGAGCGGCGCCACGATCTTTTCCGGTCAGTGTTCACACGGCCGGGGAACCCCTTCGAGCTGGCG
GCCAGCGGCACCTTCTTCGCCTGGGTCCGGCACCCTTTCCCGGGAAAGACCGGCCGGGAGGCGGCCCGCCGGCTTGCCGT
TGAGGCTGGAGTCATCTGTCTGCCCGGCGAGGTGTTTGGACCGGGGCTCGAACCGTACCTGCGGCTTGCCTTTGGCAATA
TCCGCGAGGAGGCGATACCCGAGGCCGTGGAGCGGTTCAGGGGGCTGGCCGTTTGA

Upstream 100 bases:

>100_bases
CAGTGTGTTTCGTGTGCCCCGGAGTTCTTCTTCTCCCACCGCCGCGACAGCGGGGAGACGGGACGGCAGATGGGCTTCAT
CATGTTGAAGGGGTAAACCG

Downstream 100 bases:

>100_bases
TGGCGAAGCAGAGGGAGAACGTGTTGCCTTTCTCCTGAATTCTGACTCCTTGAATTCATTCAGTTACCCCTCAGCAAGGG
TAAAGAAGAAGGTTGCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MKFAISDQIRSVHAPPITEVKGWLASREPDPGRHLIDLCQAVPDYAPARQLTDYLATCLDDPAMAKYSPDEGLLEVREGV
CARYGRVYGAAPAPEGVCLTIGASQAFWLAMVTLCRAGDEVIVPLPAYFDHPMALEMLGLRPVWLPFDEKRGGVVDPAAV
ERLITPRTRAILLVTPSNPTGVVTPPDVIHELYSLARRRGTALVIDETYADFIPGGAAPHDLFADPHWGDHLVQIMSFGK
TYALTGYRAGCLVASDAFISHALKAQDTMAVCQPRITQHAVLYGVRHLDDWVAENRLMMERRHDLFRSVFTRPGNPFELA
ASGTFFAWVRHPFPGKTGREAARRLAVEAGVICLPGEVFGPGLEPYLRLAFGNIREEAIPEAVERFRGLAV

Sequences:

>Translated_391_residues
MKFAISDQIRSVHAPPITEVKGWLASREPDPGRHLIDLCQAVPDYAPARQLTDYLATCLDDPAMAKYSPDEGLLEVREGV
CARYGRVYGAAPAPEGVCLTIGASQAFWLAMVTLCRAGDEVIVPLPAYFDHPMALEMLGLRPVWLPFDEKRGGVVDPAAV
ERLITPRTRAILLVTPSNPTGVVTPPDVIHELYSLARRRGTALVIDETYADFIPGGAAPHDLFADPHWGDHLVQIMSFGK
TYALTGYRAGCLVASDAFISHALKAQDTMAVCQPRITQHAVLYGVRHLDDWVAENRLMMERRHDLFRSVFTRPGNPFELA
ASGTFFAWVRHPFPGKTGREAARRLAVEAGVICLPGEVFGPGLEPYLRLAFGNIREEAIPEAVERFRGLAV
>Mature_391_residues
MKFAISDQIRSVHAPPITEVKGWLASREPDPGRHLIDLCQAVPDYAPARQLTDYLATCLDDPAMAKYSPDEGLLEVREGV
CARYGRVYGAAPAPEGVCLTIGASQAFWLAMVTLCRAGDEVIVPLPAYFDHPMALEMLGLRPVWLPFDEKRGGVVDPAAV
ERLITPRTRAILLVTPSNPTGVVTPPDVIHELYSLARRRGTALVIDETYADFIPGGAAPHDLFADPHWGDHLVQIMSFGK
TYALTGYRAGCLVASDAFISHALKAQDTMAVCQPRITQHAVLYGVRHLDDWVAENRLMMERRHDLFRSVFTRPGNPFELA
ASGTFFAWVRHPFPGKTGREAARRLAVEAGVICLPGEVFGPGLEPYLRLAFGNIREEAIPEAVERFRGLAV

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713256, Length=275, Percent_Identity=23.6363636363636, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI56713254, Length=275, Percent_Identity=23.6363636363636, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI95147551, Length=395, Percent_Identity=23.0379746835443, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI169881279, Length=395, Percent_Identity=23.0379746835443, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI4507369, Length=190, Percent_Identity=25.7894736842105, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1788722, Length=366, Percent_Identity=25.6830601092896, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786816, Length=363, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788627, Length=279, Percent_Identity=25.8064516129032, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787710, Length=352, Percent_Identity=24.4318181818182, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17567369, Length=271, Percent_Identity=24.7232472324723, Blast_Score=68, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6322401, Length=392, Percent_Identity=26.530612244898, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323118, Length=170, Percent_Identity=27.6470588235294, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573069, Length=251, Percent_Identity=26.2948207171315, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24646114, Length=251, Percent_Identity=26.2948207171315, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28573067, Length=251, Percent_Identity=26.2948207171315, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28573065, Length=251, Percent_Identity=26.2948207171315, Blast_Score=78, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42988; Mature: 42988

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAISDQIRSVHAPPITEVKGWLASREPDPGRHLIDLCQAVPDYAPARQLTDYLATCLD
CCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
DPAMAKYSPDEGLLEVREGVCARYGRVYGAAPAPEGVCLTIGASQAFWLAMVTLCRAGDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC
VIVPLPAYFDHPMALEMLGLRPVWLPFDEKRGGVVDPAAVERLITPRTRAILLVTPSNPT
EEEECHHHHCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCC
GVVTPPDVIHELYSLARRRGTALVIDETYADFIPGGAAPHDLFADPHWGDHLVQIMSFGK
CCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHCCC
TYALTGYRAGCLVASDAFISHALKAQDTMAVCQPRITQHAVLYGVRHLDDWVAENRLMME
EEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHDLFRSVFTRPGNPFELAASGTFFAWVRHPFPGKTGREAARRLAVEAGVICLPGEVFG
HHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCHHCC
PGLEPYLRLAFGNIREEAIPEAVERFRGLAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFAISDQIRSVHAPPITEVKGWLASREPDPGRHLIDLCQAVPDYAPARQLTDYLATCLD
CCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
DPAMAKYSPDEGLLEVREGVCARYGRVYGAAPAPEGVCLTIGASQAFWLAMVTLCRAGDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC
VIVPLPAYFDHPMALEMLGLRPVWLPFDEKRGGVVDPAAVERLITPRTRAILLVTPSNPT
EEEECHHHHCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCC
GVVTPPDVIHELYSLARRRGTALVIDETYADFIPGGAAPHDLFADPHWGDHLVQIMSFGK
CCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHCCC
TYALTGYRAGCLVASDAFISHALKAQDTMAVCQPRITQHAVLYGVRHLDDWVAENRLMME
EEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHDLFRSVFTRPGNPFELAASGTFFAWVRHPFPGKTGREAARRLAVEAGVICLPGEVFG
HHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCHHCC
PGLEPYLRLAFGNIREEAIPEAVERFRGLAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA