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The map label for this gene is ubiA

Identifier: 78224583

GI number: 78224583

Start: 3806792

End: 3807688

Strand: Reverse

Name: ubiA

Synonym: Gmet_3393

Alternate gene names: 78224583

Gene position: 3807688-3806792 (Counterclockwise)

Preceding gene: 78224584

Following gene: 78224582

Centisome position: 95.25

GC content: 65.11

Gene sequence:

>897_bases
ATGGTAAGTGAGGAAAGGATGGCCATGGGGATGTTCGGGAAGATTAAGGTGTTTCTGGAGATGATCAAGTTCTCCCACAC
GGTCTTTGCCCTCCCCTTCGCCTTTACGGGAGCGGTGCTGGCCGCCCGGGGAGTGCCGACGGCGTACCAGGTGTTCTGGA
TCCTCATGGCAATGGTGGGGGCCCGGACGGCCGCAATGGGGATGAATCGGGTCATCGACGCGGAGATTGATGCCCGCAAC
CCCCGCACCGCCGGCCGCGCCATCCCGGCGGGACTCATCGGCAAGGGAACCGCCGTCGCCTTCATCGTTATTTCGATCCT
CCTCATGCTCTACGCGGCTTACCGGCTGAACCCCCTCTGCCTCTACCTGTCGCCAGTGGCCCTCTTTTTCCTGGTCCTCT
ACTCCTACTGCAAACGCTTCACGGCACTGGCCCACGTGGTTCTCGGCATCTGTCTGGCCGCTGCCCCCCTGGGGGCCTGG
ATCGCCATCCGGGGGACGGTGGAGCTCCCTGCGGTGCTCCTGGGGCTTGCGGTCCTCTTCTGGGTGGCCGGCTTCGACAT
CCTCTACGCCCTCCAGGACCTGGAGTTCGACAAGGGGGCAGGGCTCCACTCGATTCCGTCCCGGCTCGGGGTGAACGGGT
CCCTCTGGACTGCCCGCCTCTTCCACGTGGCCATGGCGGCGCTCCTGGCGGGGCTGTACGTCAGCGCCGGACTCGGCGTC
TGGTACCTGGCGGGGCTCGGGCTCTGCGTCACCATGCTCCTCTACGAGCACTGGCTCCTCCGGGGTGGGGACCTCTCCCG
TCTGGACGCCGCCTTTTTCGCCATGAACGGCTACATCAGCATTACCCTCTTCGTGGCCACCTTCGTGGATGTCCTGGCGC
GAAAGGGGGGGGCATGA

Upstream 100 bases:

>100_bases
TACGACCACTACCCCAGCATGTTCGACCTTTCCACGGTAAACGTCGAGATGGGCCGCATGAGGAGATATCTGGAGAGTAC
CCTCGGGGAAGGGGGAGCAA

Downstream 100 bases:

>100_bases
GCGGTACGGTTCTCGTGGGGATCACCGGGGCCTCCGGCTCCGTCTACGGGCTGCGACTCTGCGAGGAGCTCCTCAAGGCG
GGAAAGCGGGTGGTGGTCAC

Product: prenyltransferase

Products: NA

Alternate protein names: 4-HB polyprenyltransferase [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MVSEERMAMGMFGKIKVFLEMIKFSHTVFALPFAFTGAVLAARGVPTAYQVFWILMAMVGARTAAMGMNRVIDAEIDARN
PRTAGRAIPAGLIGKGTAVAFIVISILLMLYAAYRLNPLCLYLSPVALFFLVLYSYCKRFTALAHVVLGICLAAAPLGAW
IAIRGTVELPAVLLGLAVLFWVAGFDILYALQDLEFDKGAGLHSIPSRLGVNGSLWTARLFHVAMAALLAGLYVSAGLGV
WYLAGLGLCVTMLLYEHWLLRGGDLSRLDAAFFAMNGYISITLFVATFVDVLARKGGA

Sequences:

>Translated_298_residues
MVSEERMAMGMFGKIKVFLEMIKFSHTVFALPFAFTGAVLAARGVPTAYQVFWILMAMVGARTAAMGMNRVIDAEIDARN
PRTAGRAIPAGLIGKGTAVAFIVISILLMLYAAYRLNPLCLYLSPVALFFLVLYSYCKRFTALAHVVLGICLAAAPLGAW
IAIRGTVELPAVLLGLAVLFWVAGFDILYALQDLEFDKGAGLHSIPSRLGVNGSLWTARLFHVAMAALLAGLYVSAGLGV
WYLAGLGLCVTMLLYEHWLLRGGDLSRLDAAFFAMNGYISITLFVATFVDVLARKGGA
>Mature_298_residues
MVSEERMAMGMFGKIKVFLEMIKFSHTVFALPFAFTGAVLAARGVPTAYQVFWILMAMVGARTAAMGMNRVIDAEIDARN
PRTAGRAIPAGLIGKGTAVAFIVISILLMLYAAYRLNPLCLYLSPVALFFLVLYSYCKRFTALAHVVLGICLAAAPLGAW
IAIRGTVELPAVLLGLAVLFWVAGFDILYALQDLEFDKGAGLHSIPSRLGVNGSLWTARLFHVAMAALLAGLYVSAGLGV
WYLAGLGLCVTMLLYEHWLLRGGDLSRLDAAFFAMNGYISITLFVATFVDVLARKGGA

Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI260656052, Length=235, Percent_Identity=28.936170212766, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1790473, Length=250, Percent_Identity=28, Blast_Score=72, Evalue=6e-14,
Organism=Drosophila melanogaster, GI21355567, Length=225, Percent_Identity=29.3333333333333, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006370
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 32098; Mature: 32098

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSEERMAMGMFGKIKVFLEMIKFSHTVFALPFAFTGAVLAARGVPTAYQVFWILMAMVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ARTAAMGMNRVIDAEIDARNPRTAGRAIPAGLIGKGTAVAFIVISILLMLYAAYRLNPLC
HHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
LYLSPVALFFLVLYSYCKRFTALAHVVLGICLAAAPLGAWIAIRGTVELPAVLLGLAVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH
WVAGFDILYALQDLEFDKGAGLHSIPSRLGVNGSLWTARLFHVAMAALLAGLYVSAGLGV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WYLAGLGLCVTMLLYEHWLLRGGDLSRLDAAFFAMNGYISITLFVATFVDVLARKGGA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSEERMAMGMFGKIKVFLEMIKFSHTVFALPFAFTGAVLAARGVPTAYQVFWILMAMVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ARTAAMGMNRVIDAEIDARNPRTAGRAIPAGLIGKGTAVAFIVISILLMLYAAYRLNPLC
HHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
LYLSPVALFFLVLYSYCKRFTALAHVVLGICLAAAPLGAWIAIRGTVELPAVLLGLAVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH
WVAGFDILYALQDLEFDKGAGLHSIPSRLGVNGSLWTARLFHVAMAALLAGLYVSAGLGV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WYLAGLGLCVTMLLYEHWLLRGGDLSRLDAAFFAMNGYISITLFVATFVDVLARKGGA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA