Click here to switch to the map view.

The map label for this gene is 78224562

Identifier: 78224562

GI number: 78224562

Start: 3787502

End: 3788785

Strand: Direct

Name: 78224562

Synonym: Gmet_3372

Alternate gene names: NA

Gene position: 3787502-3788785 (Clockwise)

Preceding gene: 78224561

Following gene: 78224563

Centisome position: 94.75

GC content: 67.37

Gene sequence:

>1284_bases
ATGATCTACCTGATTCTCGAATGGACCGGCGCCGAGCTGGTTGCAAGCCGGTTCCTGCAGCGCCGGGGCGAGCTCCTTTT
CCAGGGCGCCGACAGCCGTCCTGCAGCAACCGAAGCCGAACTGGCCGATGCCCTGCGGGAACTGCCTCCTGCCGGCAACG
ACTCCCGGATCGCCCTTTCCCTCCCCCTGGCCCGCCTTTTCATGCGGGAGATGGGTCTCCCCATCCGGGACCGGAAGAAA
CTGCGGGAGGTACTCCCCCTGGAACTCAGGGGAGAAACGGCCCTGGAGACCGACGAACTGGCCTTTGCCGGACTCCCCCT
TGCGGGGGGAGCGGTCCTCGCCCTCTGGGGGAGGAAACGGGAGCTTGCCGCCTGCATCTCGGCCACGGCAGCGGCCGGTG
TCGAACCGGAGGTTCTCTCCGCGGCTCCTCTCCACTGGGGGGAACTCCTCCCGTCGCAAGATCATGGGACCGTGGCCCTC
ACCGACGGGTCGGCCCTGGCCCTCTTCCGGGACAGGGAACCTCTCTTTTTCCGGGCCTTGACCGAGGGGGAGGATTGCGC
CCGCACCCTGGCGCTCCTGGAAATAAGCAAGGGGATCACCGTGGACCGGACCTGCCGCCTCGGCGCACCTGCCACGGCGG
AGGGCACCCCCCTTCCGGTTGAGGGGAGCCTTGCCGCAGCCTTTGGCGGCGACGAGGGAGCGGCCCGCCGCTATGGTTCC
GCCTGGGCTCTGGCCACGGCCATGGCCCAGGGGGATGCGGTGGATTTCCGCGCCGGGGATCTGGCCTGGACAAAGGGGAA
GGAAAAGGCGCTGCGCCGCCTCCGCCTCCCCCTCGCCCTGGCGGCACTCCTCCTTTTCCTCCTGGGGGCCGACGCCAGCA
TCCGCTATCTCCTCGTGAAGCGCGATCTGGCATCCCTTGACGCCTCCATTGGCACCATCTATCGCGAGGTCTTCCCCGGA
CGAAAAAAGGGGGTGGACGAGGCAGCGGAGATGCGGGCCGAACTCCGCAAGCTGGGCTCATCCGGCGGGAAAAGCCAGGT
GCTGGAAACCCTGAACCGCCTCGCCATGGCCAAGGGTGATGACATCCTCGGCCTCTACGAGGTGGAGATCGACAGCGGCC
AGGTGCGACTCAAGGGTGACGCCCGCTCGACCCAGGCGGTCAACGACTTCAAGAACCGCCTGGCAGCCATGCTCTCTCCC
GCTGAGGTGGGCCAGATAACCTCGAAGCCGGACGGCACCGTCACGTTCACCCTCCGGGGCACCATGAAGGAGGGGAGCCA
ATGA

Upstream 100 bases:

>100_bases
TCGTCTCGCGGGCCACGGTGGGCGAGGCGGTCCGGATCGTCGAAGCGGTGGTGGGCCTCGAAGGAATGCAGCCGCAGTAT
CTCTACTGGAGAGAGTATTG

Downstream 100 bases:

>100_bases
CCGTATTCGACCGCATCCGCGACGCCTATGGGGCCATGGACAGCCAGACCCGCCTCCGCTGGGGATATGCCCTCATTGCG
CTGCTGGCCCTGGCCGTGGC

Product: general secretion pathway protein L

Products: NA

Alternate protein names: Type II Secretion System Protein GspL

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MIYLILEWTGAELVASRFLQRRGELLFQGADSRPAATEAELADALRELPPAGNDSRIALSLPLARLFMREMGLPIRDRKK
LREVLPLELRGETALETDELAFAGLPLAGGAVLALWGRKRELAACISATAAAGVEPEVLSAAPLHWGELLPSQDHGTVAL
TDGSALALFRDREPLFFRALTEGEDCARTLALLEISKGITVDRTCRLGAPATAEGTPLPVEGSLAAAFGGDEGAARRYGS
AWALATAMAQGDAVDFRAGDLAWTKGKEKALRRLRLPLALAALLLFLLGADASIRYLLVKRDLASLDASIGTIYREVFPG
RKKGVDEAAEMRAELRKLGSSGGKSQVLETLNRLAMAKGDDILGLYEVEIDSGQVRLKGDARSTQAVNDFKNRLAAMLSP
AEVGQITSKPDGTVTFTLRGTMKEGSQ

Sequences:

>Translated_427_residues
MIYLILEWTGAELVASRFLQRRGELLFQGADSRPAATEAELADALRELPPAGNDSRIALSLPLARLFMREMGLPIRDRKK
LREVLPLELRGETALETDELAFAGLPLAGGAVLALWGRKRELAACISATAAAGVEPEVLSAAPLHWGELLPSQDHGTVAL
TDGSALALFRDREPLFFRALTEGEDCARTLALLEISKGITVDRTCRLGAPATAEGTPLPVEGSLAAAFGGDEGAARRYGS
AWALATAMAQGDAVDFRAGDLAWTKGKEKALRRLRLPLALAALLLFLLGADASIRYLLVKRDLASLDASIGTIYREVFPG
RKKGVDEAAEMRAELRKLGSSGGKSQVLETLNRLAMAKGDDILGLYEVEIDSGQVRLKGDARSTQAVNDFKNRLAAMLSP
AEVGQITSKPDGTVTFTLRGTMKEGSQ
>Mature_427_residues
MIYLILEWTGAELVASRFLQRRGELLFQGADSRPAATEAELADALRELPPAGNDSRIALSLPLARLFMREMGLPIRDRKK
LREVLPLELRGETALETDELAFAGLPLAGGAVLALWGRKRELAACISATAAAGVEPEVLSAAPLHWGELLPSQDHGTVAL
TDGSALALFRDREPLFFRALTEGEDCARTLALLEISKGITVDRTCRLGAPATAEGTPLPVEGSLAAAFGGDEGAARRYGS
AWALATAMAQGDAVDFRAGDLAWTKGKEKALRRLRLPLALAALLLFLLGADASIRYLLVKRDLASLDASIGTIYREVFPG
RKKGVDEAAEMRAELRKLGSSGGKSQVLETLNRLAMAKGDDILGLYEVEIDSGQVRLKGDARSTQAVNDFKNRLAAMLSP
AEVGQITSKPDGTVTFTLRGTMKEGSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45688; Mature: 45688

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYLILEWTGAELVASRFLQRRGELLFQGADSRPAATEAELADALRELPPAGNDSRIALS
CEEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
LPLARLFMREMGLPIRDRKKLREVLPLELRGETALETDELAFAGLPLAGGAVLALWGRKR
CHHHHHHHHHCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHEECCCCCCCEEEEEECCCH
ELAACISATAAAGVEPEVLSAAPLHWGELLPSQDHGTVALTDGSALALFRDREPLFFRAL
HHHHHHHHHHHCCCCHHHHHCCCCCHHHCCCCCCCCEEEEECCCEEEEEECCCCEEEEEE
TEGEDCARTLALLEISKGITVDRTCRLGAPATAEGTPLPVEGSLAAAFGGDEGAARRYGS
CCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHCCC
AWALATAMAQGDAVDFRAGDLAWTKGKEKALRRLRLPLALAALLLFLLGADASIRYLLVK
HHHHHHHHHCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
RDLASLDASIGTIYREVFPGRKKGVDEAAEMRAELRKLGSSGGKSQVLETLNRLAMAKGD
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
DILGLYEVEIDSGQVRLKGDARSTQAVNDFKNRLAAMLSPAEVGQITSKPDGTVTFTLRG
CEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEEEEE
TMKEGSQ
CCCCCCC
>Mature Secondary Structure
MIYLILEWTGAELVASRFLQRRGELLFQGADSRPAATEAELADALRELPPAGNDSRIALS
CEEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
LPLARLFMREMGLPIRDRKKLREVLPLELRGETALETDELAFAGLPLAGGAVLALWGRKR
CHHHHHHHHHCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHEECCCCCCCEEEEEECCCH
ELAACISATAAAGVEPEVLSAAPLHWGELLPSQDHGTVALTDGSALALFRDREPLFFRAL
HHHHHHHHHHHCCCCHHHHHCCCCCHHHCCCCCCCCEEEEECCCEEEEEECCCCEEEEEE
TEGEDCARTLALLEISKGITVDRTCRLGAPATAEGTPLPVEGSLAAAFGGDEGAARRYGS
CCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHCCC
AWALATAMAQGDAVDFRAGDLAWTKGKEKALRRLRLPLALAALLLFLLGADASIRYLLVK
HHHHHHHHHCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
RDLASLDASIGTIYREVFPGRKKGVDEAAEMRAELRKLGSSGGKSQVLETLNRLAMAKGD
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
DILGLYEVEIDSGQVRLKGDARSTQAVNDFKNRLAAMLSPAEVGQITSKPDGTVTFTLRG
CEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEEEEE
TMKEGSQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA