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The map label for this gene is 78224553

Identifier: 78224553

GI number: 78224553

Start: 3779067

End: 3779939

Strand: Direct

Name: 78224553

Synonym: Gmet_3363

Alternate gene names: NA

Gene position: 3779067-3779939 (Clockwise)

Preceding gene: 78224550

Following gene: 78224554

Centisome position: 94.54

GC content: 60.02

Gene sequence:

>873_bases
ATGAAAAAGATTTATTTCATAACCGCTCTTCTCCTCATTCTGAACTCTCTGGCACTCGCTCGGATTGCGGCGGCCCTGGT
GGGCTATCGCCTGTCCCATACCCTTCAGAGCACCGTCAATCGTACCCACAACGCCGTGAAACCGGCCCAATCAGAGGCGC
TGTCAGCGTATGCGCCCATTGTCGAAAAGGGGCTCTTCGGGCGTGCGGCACAGGGGAAGTTGACACTCCTCACAGCAACA
GCACCAGTTGCCAAGGGAAGCAACCCGCCATCCGCTCAAGGGGACCTTGTCCTCGTCGGCACGGTACGGGGCTCATTCCG
GGAGACCTTTGCCCTGATCAGGCGAACCACGCCGCCCGAGGAGCGGGTTTTCAGGCTCGGCGACCAGGTTTTCGAACGGG
GCCCCCTCGTGAGCGTCCAAAAGGAGAGTGTCGAAATTCTGTCCGGCGGAAAGCGGGTCAAATTGCTGACACCTCAGGCG
ACACCGTCTGAATCACCGGCATCTCCTTCCCCCCAGGGACCTGCCGTGACAGGCGGGGCAACCCAAACCGGATCGGGGAC
CTTCGTCGTCGACCAACGGCTCCTGAATGCGGCCCTCGACAACATCGGCCAGGCCATGACCGACGCCCGGCTCCTCCCCA
GCGTCAAGGACGGCAAAGTGGAGGGGTTCCGCGTTTCGGAGGTGAAACCGTCAGGGGTCTTTGCCATGGTAGGCATCAAA
AACGGCGATGTGCTGCACAAAATAAACGATCTCCCCGTTGACTCCCCTGAACGGGCTATCCAGTCCCTTGCCTCCCTCAA
GGGGCAGAACCGGATCAAGCTCGATCTGGTACGGGACGGGCAACCGTCAACGTTCAGTTACGACATACGCTAA

Upstream 100 bases:

>100_bases
GGGGCCTCCCGTTGATAGCGCTCTGGTGGTGTTTTCTCTTGCCAGCCCTGAACATCTTGATTAGTATGAACCTCACTTTC
GGCAGCGCTAAGTAGGCATT

Downstream 100 bases:

>100_bases
TCCAGGTCCGGGCCATCCCGAACCAGCAGACGCTTCACCCGGAGGCATTCGTGATCATACGCTTCTCAGCAGGGCTCGCC
TCGGCGGCACTTCTCCTCTC

Product: PDZ/DHR/GLGF

Products: NA

Alternate protein names: Type II Secretory Pathway Component PulC-Like Protein; Type II Secretion System Protein GspC Serine Protease; Pdz/Dhr/Glgf; PDZ/DHR/GLGF Domain-Containing Protein

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKKIYFITALLLILNSLALARIAAALVGYRLSHTLQSTVNRTHNAVKPAQSEALSAYAPIVEKGLFGRAAQGKLTLLTAT
APVAKGSNPPSAQGDLVLVGTVRGSFRETFALIRRTTPPEERVFRLGDQVFERGPLVSVQKESVEILSGGKRVKLLTPQA
TPSESPASPSPQGPAVTGGATQTGSGTFVVDQRLLNAALDNIGQAMTDARLLPSVKDGKVEGFRVSEVKPSGVFAMVGIK
NGDVLHKINDLPVDSPERAIQSLASLKGQNRIKLDLVRDGQPSTFSYDIR

Sequences:

>Translated_290_residues
MKKIYFITALLLILNSLALARIAAALVGYRLSHTLQSTVNRTHNAVKPAQSEALSAYAPIVEKGLFGRAAQGKLTLLTAT
APVAKGSNPPSAQGDLVLVGTVRGSFRETFALIRRTTPPEERVFRLGDQVFERGPLVSVQKESVEILSGGKRVKLLTPQA
TPSESPASPSPQGPAVTGGATQTGSGTFVVDQRLLNAALDNIGQAMTDARLLPSVKDGKVEGFRVSEVKPSGVFAMVGIK
NGDVLHKINDLPVDSPERAIQSLASLKGQNRIKLDLVRDGQPSTFSYDIR
>Mature_290_residues
MKKIYFITALLLILNSLALARIAAALVGYRLSHTLQSTVNRTHNAVKPAQSEALSAYAPIVEKGLFGRAAQGKLTLLTAT
APVAKGSNPPSAQGDLVLVGTVRGSFRETFALIRRTTPPEERVFRLGDQVFERGPLVSVQKESVEILSGGKRVKLLTPQA
TPSESPASPSPQGPAVTGGATQTGSGTFVVDQRLLNAALDNIGQAMTDARLLPSVKDGKVEGFRVSEVKPSGVFAMVGIK
NGDVLHKINDLPVDSPERAIQSLASLKGQNRIKLDLVRDGQPSTFSYDIR

Specific function: Unknown

COG id: COG3031

COG function: function code U; Type II secretory pathway, component PulC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30844; Mature: 30844

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIYFITALLLILNSLALARIAAALVGYRLSHTLQSTVNRTHNAVKPAQSEALSAYAPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VEKGLFGRAAQGKLTLLTATAPVAKGSNPPSAQGDLVLVGTVRGSFRETFALIRRTTPPE
HHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHH
ERVFRLGDQVFERGPLVSVQKESVEILSGGKRVKLLTPQATPSESPASPSPQGPAVTGGA
HHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCC
TQTGSGTFVVDQRLLNAALDNIGQAMTDARLLPSVKDGKVEGFRVSEVKPSGVFAMVGIK
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEEEC
NGDVLHKINDLPVDSPERAIQSLASLKGQNRIKLDLVRDGQPSTFSYDIR
CCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCC
>Mature Secondary Structure
MKKIYFITALLLILNSLALARIAAALVGYRLSHTLQSTVNRTHNAVKPAQSEALSAYAPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VEKGLFGRAAQGKLTLLTATAPVAKGSNPPSAQGDLVLVGTVRGSFRETFALIRRTTPPE
HHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHH
ERVFRLGDQVFERGPLVSVQKESVEILSGGKRVKLLTPQATPSESPASPSPQGPAVTGGA
HHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCC
TQTGSGTFVVDQRLLNAALDNIGQAMTDARLLPSVKDGKVEGFRVSEVKPSGVFAMVGIK
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEEEC
NGDVLHKINDLPVDSPERAIQSLASLKGQNRIKLDLVRDGQPSTFSYDIR
CCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA