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The map label for this gene is 78224502

Identifier: 78224502

GI number: 78224502

Start: 3725908

End: 3727299

Strand: Direct

Name: 78224502

Synonym: Gmet_3311

Alternate gene names: NA

Gene position: 3725908-3727299 (Clockwise)

Preceding gene: 78224501

Following gene: 78224503

Centisome position: 93.21

GC content: 67.53

Gene sequence:

>1392_bases
ATGACCGCCCACCCCCCAGTCCACTGGCACCAGGGGCTCTTTCTCCAGCCCCAGCATTTCCAGCTTCTTGACCTGTCAAT
CCAGGGGCGCCTCGCCCCCCTCTTCAGCTATCTCCACCCCCATTTCTGGGGGGCCGGGGAGTTGGAGATCGAGGAGAGCG
CCCTCGGCACCGGGATCTTCAGCATCCTCTCGGGAGAATTTCTCTTCCCCGACGGCACCTGGGCGGTCCTGGGCGAAAAC
GCCCTATGCGAGCCCCGCTCCTTCGACAGTGCCTGGCTTGAGGGGGATAAACCCCTCATGGTCTCCGTCGGTATCCGCAA
ATGGCAGGAAGCGGGGGAAAACGTGACGACGGTGGAGCGTCTGGAGGGGCTTTCGGCCGTCTCCACCCGTTTTGCGGCCC
CCATGGACCCGGAGGAGGCACGGGATCTCCACGCCGGTGGTCCCCCGGGGCAGGTAAAGCGGCTGCGGCATATGATCAAG
ATCTTCTGGGACAGCGAGCGAGAGCAGCTGGGGGACTGGCACCTAATTCCCGTGGCCCGGCTGGAGCGCTTCGGGGCCGA
GGTGCGCCTCTCCCGGCGATTCATCCCCCCTTCCCTGGCCCTGGAAGCCAGCGAACCACTCTTCCGCATCATCCGGGAAA
TCCGGGACCAGGTGGCGGCCCGGGGGCGGCAGCTGGAGGAGCACAAGAAGCAGCGGGGGATCCAGAACGCCGAGTTCGGC
TCCCGGGACCTGGTCTACCTCCTGGCGCTCCGCTCCCTGAACCGCCATGTACCGTACCTCTTCCACCTGACCGAGGCCAG
GCGGGTCCACCCCTGGGACGCCTACGGTGCCCTGCGTCAGCTCATCGGCGAGCTGGCCTCCTTCTCGGAGCGGGTTTCGG
CCCTGGGAGAGCTGGACGACGGGGTCCGCCTCCTTCCCCCCTACGACCACCGGGCCCTGGGAGAGTGCTTCGCCGGGGCC
CGGGACCTGATCGCCCAGCTCCTGGACGAGATCACCGCCGGTCCCAACTACGTGATCCGCCTCCTCCACGACGGCACTTT
CTTCAGCGCCGAGCTGAAACCTGCGGTATTCGACGGCGGCAGCCGCTACTACCTGGCCCTGCGCACCAAGGAAGAGCCAA
CCACCTTCCTCCCCTCCCTGGAAACCTCCGCCAAGCTCAGCGCCCGGGAGCACCTGCCGGTCCTGGCGTCACGGGCACTC
CCCGGCATCGAATTGGCCCACATGCCGGTTCCGCCCCAGGAGCTGCCGCGCCGTTCCGACACCCACTACTTCGCCGTGGA
CGCCGCCGGCGACCAGTGGCCCCTGGTGGAGCGGGAGCACACACTGGCCCTCTACTGGACCAGCGCCCCCGCCGACCTGG
AGGTGGAGCTGATGGTGGTGGCGCGAGACTAA

Upstream 100 bases:

>100_bases
TCCTCAGCCGGACCAAACTCGTGAAACCGGGACGGCTTGACATGAAACTCCTCCTAGGTCCCCAGGAGATCCAGGACGTG
ACTGAGGAGACCGAAAAACC

Downstream 100 bases:

>100_bases
CCCATGCGCGACGAACGTCTTCTGGAACGGATCCGCTCCTTCGAGCGGGACCCGGCCCGGCGCGGCCGCCCCGACCACGG
GCGGCTGGTGGAGTCGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein ImpJ/VasE; Type VI Secretion System Protein EvpM; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion Protein Family; Type VI Secretion System Core Protein; T6ss M; Conserved Protein; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MTAHPPVHWHQGLFLQPQHFQLLDLSIQGRLAPLFSYLHPHFWGAGELEIEESALGTGIFSILSGEFLFPDGTWAVLGEN
ALCEPRSFDSAWLEGDKPLMVSVGIRKWQEAGENVTTVERLEGLSAVSTRFAAPMDPEEARDLHAGGPPGQVKRLRHMIK
IFWDSEREQLGDWHLIPVARLERFGAEVRLSRRFIPPSLALEASEPLFRIIREIRDQVAARGRQLEEHKKQRGIQNAEFG
SRDLVYLLALRSLNRHVPYLFHLTEARRVHPWDAYGALRQLIGELASFSERVSALGELDDGVRLLPPYDHRALGECFAGA
RDLIAQLLDEITAGPNYVIRLLHDGTFFSAELKPAVFDGGSRYYLALRTKEEPTTFLPSLETSAKLSAREHLPVLASRAL
PGIELAHMPVPPQELPRRSDTHYFAVDAAGDQWPLVEREHTLALYWTSAPADLEVELMVVARD

Sequences:

>Translated_463_residues
MTAHPPVHWHQGLFLQPQHFQLLDLSIQGRLAPLFSYLHPHFWGAGELEIEESALGTGIFSILSGEFLFPDGTWAVLGEN
ALCEPRSFDSAWLEGDKPLMVSVGIRKWQEAGENVTTVERLEGLSAVSTRFAAPMDPEEARDLHAGGPPGQVKRLRHMIK
IFWDSEREQLGDWHLIPVARLERFGAEVRLSRRFIPPSLALEASEPLFRIIREIRDQVAARGRQLEEHKKQRGIQNAEFG
SRDLVYLLALRSLNRHVPYLFHLTEARRVHPWDAYGALRQLIGELASFSERVSALGELDDGVRLLPPYDHRALGECFAGA
RDLIAQLLDEITAGPNYVIRLLHDGTFFSAELKPAVFDGGSRYYLALRTKEEPTTFLPSLETSAKLSAREHLPVLASRAL
PGIELAHMPVPPQELPRRSDTHYFAVDAAGDQWPLVEREHTLALYWTSAPADLEVELMVVARD
>Mature_462_residues
TAHPPVHWHQGLFLQPQHFQLLDLSIQGRLAPLFSYLHPHFWGAGELEIEESALGTGIFSILSGEFLFPDGTWAVLGENA
LCEPRSFDSAWLEGDKPLMVSVGIRKWQEAGENVTTVERLEGLSAVSTRFAAPMDPEEARDLHAGGPPGQVKRLRHMIKI
FWDSEREQLGDWHLIPVARLERFGAEVRLSRRFIPPSLALEASEPLFRIIREIRDQVAARGRQLEEHKKQRGIQNAEFGS
RDLVYLLALRSLNRHVPYLFHLTEARRVHPWDAYGALRQLIGELASFSERVSALGELDDGVRLLPPYDHRALGECFAGAR
DLIAQLLDEITAGPNYVIRLLHDGTFFSAELKPAVFDGGSRYYLALRTKEEPTTFLPSLETSAKLSAREHLPVLASRALP
GIELAHMPVPPQELPRRSDTHYFAVDAAGDQWPLVEREHTLALYWTSAPADLEVELMVVARD

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52142; Mature: 52011

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAHPPVHWHQGLFLQPQHFQLLDLSIQGRLAPLFSYLHPHFWGAGELEIEESALGTGIF
CCCCCCCCCCCCCEECCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHH
SILSGEFLFPDGTWAVLGENALCEPRSFDSAWLEGDKPLMVSVGIRKWQEAGENVTTVER
HHHCCCEECCCCCEEEECCCCCCCCCCCCCHHHCCCCCEEEECCHHHHHHCCCCCHHHHH
LEGLSAVSTRFAAPMDPEEARDLHAGGPPGQVKRLRHMIKIFWDSEREQLGDWHLIPVAR
HHCHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCEEEEHHHH
LERFGAEVRLSRRFIPPSLALEASEPLFRIIREIRDQVAARGRQLEEHKKQRGIQNAEFG
HHHCCHHHEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
SRDLVYLLALRSLNRHVPYLFHLTEARRVHPWDAYGALRQLIGELASFSERVSALGELDD
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVRLLPPYDHRALGECFAGARDLIAQLLDEITAGPNYVIRLLHDGTFFSAELKPAVFDGG
CCEECCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCEEECCC
SRYYLALRTKEEPTTFLPSLETSAKLSAREHLPVLASRALPGIELAHMPVPPQELPRRSD
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCEEEECCCCHHHCCCCCC
THYFAVDAAGDQWPLVEREHTLALYWTSAPADLEVELMVVARD
CEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure 
TAHPPVHWHQGLFLQPQHFQLLDLSIQGRLAPLFSYLHPHFWGAGELEIEESALGTGIF
CCCCCCCCCCCCEECCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHH
SILSGEFLFPDGTWAVLGENALCEPRSFDSAWLEGDKPLMVSVGIRKWQEAGENVTTVER
HHHCCCEECCCCCEEEECCCCCCCCCCCCCHHHCCCCCEEEECCHHHHHHCCCCCHHHHH
LEGLSAVSTRFAAPMDPEEARDLHAGGPPGQVKRLRHMIKIFWDSEREQLGDWHLIPVAR
HHCHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCEEEEHHHH
LERFGAEVRLSRRFIPPSLALEASEPLFRIIREIRDQVAARGRQLEEHKKQRGIQNAEFG
HHHCCHHHEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
SRDLVYLLALRSLNRHVPYLFHLTEARRVHPWDAYGALRQLIGELASFSERVSALGELDD
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVRLLPPYDHRALGECFAGARDLIAQLLDEITAGPNYVIRLLHDGTFFSAELKPAVFDGG
CCEECCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCEEECCC
SRYYLALRTKEEPTTFLPSLETSAKLSAREHLPVLASRALPGIELAHMPVPPQELPRRSD
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCEEEECCCCHHHCCCCCC
THYFAVDAAGDQWPLVEREHTLALYWTSAPADLEVELMVVARD
CEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA