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The map label for this gene is 78224467

Identifier: 78224467

GI number: 78224467

Start: 3684447

End: 3686120

Strand: Reverse

Name: 78224467

Synonym: Gmet_3276

Alternate gene names: NA

Gene position: 3686120-3684447 (Counterclockwise)

Preceding gene: 78224471

Following gene: 78224466

Centisome position: 92.21

GC content: 66.31

Gene sequence:

>1674_bases
ATGGTTACTCGGGAGGAGCAGCACAACCGACGTGATAATGCCGCCTCACGTCGTCGCGGTGCTGCCTTGGCCGAACTCCA
CAAGGCCCTCAAGGCCATGGGATTCTACCCTGCGGGGCATCCGCTCCGGGCGGAAAGCCTCCGTCTTGCCTTCGGCGCCC
TTCGCGAGGCCGTGGGGGAGGAGCATCTTCTGCTGGCGGTGGGCAAGGGGGGCTTTGCCGTTCCCGACGGGGAAGCGGCC
GTGGAGGATAATCCCATGGCCCAGGCCCTCGCCCGGGAGCTCTTTATCCGGAGGGTTCGCCGCATCGCGTTTCTGGCAGA
CCTCACCCTGACAGACCTGGAGTCCTTTCTTTCCCTTCTTTCCCTCGATTATCGGAGCATTCCCTCTGCCGGCGGCATGG
AGGCGCTCATGGCGCAACGGGGGATCACCACCATCTGGGCCAATGAGATCGATCTGTCCGCCATCGGCCGCAAGCGGCAG
GAAATTCAGGACTCCTTTGCCGCGGCGGGGCAGGGACCATCTGTCGGGGAATGGCAGCCTGGCGAGGCGTTTCTGAAAGA
AATTGAGGAGGCAGAGATCGATACGGCGCTTTCCGTGATCCCTGCGGCGGAGTTCCATGCCGACGGTGCCTGGGAGCAGC
AAACGACGACTCCTGAAGAGCTCATCGAACTCATGGCGCGGGAGCCCGATGACGAACGCTATCGCGAGCTCAGTCGGGCT
TTCGTGAAAGAGTGCCTCCGCCTTCAGGACGACAGCGAATTCGAGCGGCTCTTTCCGCTCCTTGAGCGTCTACTGCAGCA
GGCCAATGACGGGGAGATGGGACTCGCCCGGCGCGGCAGCGCCCTCCTCGCCTTCGACCAGACGGTGGGGACGGGGATGG
TCGGTTTTCTCGTGCGGCACCTGGAGGAACACGGGGCCACGGAGGGGGACCGCCTTCTCCCCTTCTTCGCCGAATTGGGC
TCCCGGGCAGCGGCTCCCCTGGCGGCGCGGCTTCGCTGCGCCGAAGGGGTCCGTCCCCTCAGGAATCTTGCTTTGGGGCT
TTTGGCCGTGGGAGACGAGGCGGTCGAGCCCGTGCTTGAACTTCTTGCCGACGGGAGCGATCCCGTGGTTCAGACGGCGG
CGGAGATTCTCGGCGAGATCGGCGCGGGTGGCTGCTTGGCGGAACTGCGGCAATGCCTTGGCCATCCCGCTGAGGGGGTG
CGCCGCGAGGTCCTCAGAAGCCTTGTGCGCATCGGCGGTCCCGAAGCGGAGGAGGCGATCATTGCCTGTCTCGACTCGTC
CCGCGATCCGGCCCTACGACGCCTTGCAGCAGTCTCCCTTGGGGCGCTCCGGAGCGGCCGGGCGGTGGAGCCGCTCCTTG
CCGTCGTGGCCAGGAGGGATCTCTTTGCAAGCACGTTCTCCCTCAAGAAGGTTGCTCTTGCCGCCCTCGGCAAGATCGGC
GACCGGCGGGCCGTTCCCGCCCTTGTGGCGCTGTTGGGGAGTCGGCACTGGTTTTCCCGGCGGCGGGGAGAGGAACTGCG
CTGCCTTGCCGCCGCCGCCCTCGGCCAAATTGGTGATACGGCAACGCTTCCCCTTCTTTCGGAGCTGGCTGCCAAGGGGG
GGCGCCTCGGCGCGGCCTGCGACGGGGCCGTCGGCGCCATAGGGCAGCGACAGCAGGAGGGAGCCCATGACTGA

Upstream 100 bases:

>100_bases
TGTCAACGGAGCCACAGGACAACCCGTGTCAGGAAGTTGTCGCCGGCGTGCTCCCTTTGACAGGTGCGTGGGCGTTGTCC
CGACCATAAAGGAGACAGAG

Downstream 100 bases:

>100_bases
TTTGTCCCTGGCCCAGGCGCAACGGGTGGTTCTTCTTCTGGCGGGCACCGTGAAGGGGTACTCCCTCTATCCCGAGGCCC
ATCCTGCCATTGCCCAGCCC

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: HEAT-Like Repeat-Containing Protein; HEAT Repeat-Containing Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MVTREEQHNRRDNAASRRRGAALAELHKALKAMGFYPAGHPLRAESLRLAFGALREAVGEEHLLLAVGKGGFAVPDGEAA
VEDNPMAQALARELFIRRVRRIAFLADLTLTDLESFLSLLSLDYRSIPSAGGMEALMAQRGITTIWANEIDLSAIGRKRQ
EIQDSFAAAGQGPSVGEWQPGEAFLKEIEEAEIDTALSVIPAAEFHADGAWEQQTTTPEELIELMAREPDDERYRELSRA
FVKECLRLQDDSEFERLFPLLERLLQQANDGEMGLARRGSALLAFDQTVGTGMVGFLVRHLEEHGATEGDRLLPFFAELG
SRAAAPLAARLRCAEGVRPLRNLALGLLAVGDEAVEPVLELLADGSDPVVQTAAEILGEIGAGGCLAELRQCLGHPAEGV
RREVLRSLVRIGGPEAEEAIIACLDSSRDPALRRLAAVSLGALRSGRAVEPLLAVVARRDLFASTFSLKKVALAALGKIG
DRRAVPALVALLGSRHWFSRRRGEELRCLAAAALGQIGDTATLPLLSELAAKGGRLGAACDGAVGAIGQRQQEGAHD

Sequences:

>Translated_557_residues
MVTREEQHNRRDNAASRRRGAALAELHKALKAMGFYPAGHPLRAESLRLAFGALREAVGEEHLLLAVGKGGFAVPDGEAA
VEDNPMAQALARELFIRRVRRIAFLADLTLTDLESFLSLLSLDYRSIPSAGGMEALMAQRGITTIWANEIDLSAIGRKRQ
EIQDSFAAAGQGPSVGEWQPGEAFLKEIEEAEIDTALSVIPAAEFHADGAWEQQTTTPEELIELMAREPDDERYRELSRA
FVKECLRLQDDSEFERLFPLLERLLQQANDGEMGLARRGSALLAFDQTVGTGMVGFLVRHLEEHGATEGDRLLPFFAELG
SRAAAPLAARLRCAEGVRPLRNLALGLLAVGDEAVEPVLELLADGSDPVVQTAAEILGEIGAGGCLAELRQCLGHPAEGV
RREVLRSLVRIGGPEAEEAIIACLDSSRDPALRRLAAVSLGALRSGRAVEPLLAVVARRDLFASTFSLKKVALAALGKIG
DRRAVPALVALLGSRHWFSRRRGEELRCLAAAALGQIGDTATLPLLSELAAKGGRLGAACDGAVGAIGQRQQEGAHD
>Mature_557_residues
MVTREEQHNRRDNAASRRRGAALAELHKALKAMGFYPAGHPLRAESLRLAFGALREAVGEEHLLLAVGKGGFAVPDGEAA
VEDNPMAQALARELFIRRVRRIAFLADLTLTDLESFLSLLSLDYRSIPSAGGMEALMAQRGITTIWANEIDLSAIGRKRQ
EIQDSFAAAGQGPSVGEWQPGEAFLKEIEEAEIDTALSVIPAAEFHADGAWEQQTTTPEELIELMAREPDDERYRELSRA
FVKECLRLQDDSEFERLFPLLERLLQQANDGEMGLARRGSALLAFDQTVGTGMVGFLVRHLEEHGATEGDRLLPFFAELG
SRAAAPLAARLRCAEGVRPLRNLALGLLAVGDEAVEPVLELLADGSDPVVQTAAEILGEIGAGGCLAELRQCLGHPAEGV
RREVLRSLVRIGGPEAEEAIIACLDSSRDPALRRLAAVSLGALRSGRAVEPLLAVVARRDLFASTFSLKKVALAALGKIG
DRRAVPALVALLGSRHWFSRRRGEELRCLAAAALGQIGDTATLPLLSELAAKGGRLGAACDGAVGAIGQRQQEGAHD

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59808; Mature: 59808

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTREEQHNRRDNAASRRRGAALAELHKALKAMGFYPAGHPLRAESLRLAFGALREAVGE
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
EHLLLAVGKGGFAVPDGEAAVEDNPMAQALARELFIRRVRRIAFLADLTLTDLESFLSLL
CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLDYRSIPSAGGMEALMAQRGITTIWANEIDLSAIGRKRQEIQDSFAAAGQGPSVGEWQP
HHHHHCCCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GEAFLKEIEEAEIDTALSVIPAAEFHADGAWEQQTTTPEELIELMAREPDDERYRELSRA
HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
FVKECLRLQDDSEFERLFPLLERLLQQANDGEMGLARRGSALLAFDQTVGTGMVGFLVRH
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHH
LEEHGATEGDRLLPFFAELGSRAAAPLAARLRCAEGVRPLRNLALGLLAVGDEAVEPVLE
HHHHCCCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LLADGSDPVVQTAAEILGEIGAGGCLAELRQCLGHPAEGVRREVLRSLVRIGGPEAEEAI
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
IACLDSSRDPALRRLAAVSLGALRSGRAVEPLLAVVARRDLFASTFSLKKVALAALGKIG
HHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRRAVPALVALLGSRHWFSRRRGEELRCLAAAALGQIGDTATLPLLSELAAKGGRLGAAC
CHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
DGAVGAIGQRQQEGAHD
CCHHHHCCCHHHCCCCC
>Mature Secondary Structure
MVTREEQHNRRDNAASRRRGAALAELHKALKAMGFYPAGHPLRAESLRLAFGALREAVGE
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
EHLLLAVGKGGFAVPDGEAAVEDNPMAQALARELFIRRVRRIAFLADLTLTDLESFLSLL
CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLDYRSIPSAGGMEALMAQRGITTIWANEIDLSAIGRKRQEIQDSFAAAGQGPSVGEWQP
HHHHHCCCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GEAFLKEIEEAEIDTALSVIPAAEFHADGAWEQQTTTPEELIELMAREPDDERYRELSRA
HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
FVKECLRLQDDSEFERLFPLLERLLQQANDGEMGLARRGSALLAFDQTVGTGMVGFLVRH
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHH
LEEHGATEGDRLLPFFAELGSRAAAPLAARLRCAEGVRPLRNLALGLLAVGDEAVEPVLE
HHHHCCCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LLADGSDPVVQTAAEILGEIGAGGCLAELRQCLGHPAEGVRREVLRSLVRIGGPEAEEAI
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
IACLDSSRDPALRRLAAVSLGALRSGRAVEPLLAVVARRDLFASTFSLKKVALAALGKIG
HHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRRAVPALVALLGSRHWFSRRRGEELRCLAAAALGQIGDTATLPLLSELAAKGGRLGAAC
CHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
DGAVGAIGQRQQEGAHD
CCHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA