| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224459
Identifier: 78224459
GI number: 78224459
Start: 3677438
End: 3678331
Strand: Direct
Name: 78224459
Synonym: Gmet_3268
Alternate gene names: NA
Gene position: 3677438-3678331 (Clockwise)
Preceding gene: 78224458
Following gene: 78224460
Centisome position: 92.0
GC content: 61.41
Gene sequence:
>894_bases GTGGAACAATTGAGCAAAATGGAAAAAGCCGCGGCTCTGATCCGCGGCATGACTGATCTCCCCACCATCCCCGCCGTGGC CACCCAGGTCCTGTCGCTCCTGGACCAACCCGACGTGGAGATCGACCAGGTGGCCGAGCTTCTCCTCACCGACCAGGTCA TGGCGGCCCGGGTCCTGAAGATGGTCAACTCTCCCCTCTACCGGCCAGCCACGGTCATCACCTCCCTCAAGGGGGCGCTG GTCTATCTGGGGTTGCGGCACATCAGGGAGTTCATCCTCACCTGCTCCTTCATCCAGAGCTTCGAGGGAAAAGAGGGAGT GCTCGGGGTAAAGCCCTTCTGGGAGCACTCCTTCGGCGTCGGCATCGTAGCGCGGCTCATCGCCGCGAAGGTTGGATACC ACGATACGGAGAAGGCCTACATCGGCGGCCTCATCCACGACATCGGCGAGGTCTTCCTGAGCTATTACCTGAAGGACAAA TTCCAAAAGGTGGTAGACGCCATCAGGGAGAGCCCGGTGCAACTGGTGGAGGCCGAGGAACGCATTCTCGGCACGACCCA CTGCGAGGTGGGACTCTGCCTGGCCCGGGAGTGGCATTTCCCCGATGACTACTGTGAGATTGTCGCCTGCCACCACGCCC CCCGCGAGGCCACAAACGCGCCGCGGCTCGTCGCCATCGTGAACCTGGCGGACCTCTTCTGCACCGTCCGGAACCTGGAT TACGGCGGGAAGGAGTGGACCAGCTTTTCCCTGGCCGATGAGCCGGCCTGGGCCATGATTCAGGAACAGGGGAAGAAGCT TGCGGAGTTTGACGTGGAACGGTTTTGCTACGAACTGGACGACCAGGTGGAGGAGATCCGGGAACTGGTCACGAACATCT TCAAGGACAGGTGA
Upstream 100 bases:
>100_bases TGGGGCAATCGGAATCCCTGCACGGCGTGAATGACAAGTTCAAAACGGTCCACTTCCCCGGCGGATTTGCCTACAAAAAG TGAAAGGTGGAACGGATAGC
Downstream 100 bases:
>100_bases CAAAGCATGCTTCCGAATCAGGAAAGAAAACTGCGCGTACTCGTTGTGGACGACTCGTCCTTCATGCGGATGGTCATCCG GAGCGTGCTGGAGAAGGATC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MEQLSKMEKAAALIRGMTDLPTIPAVATQVLSLLDQPDVEIDQVAELLLTDQVMAARVLKMVNSPLYRPATVITSLKGAL VYLGLRHIREFILTCSFIQSFEGKEGVLGVKPFWEHSFGVGIVARLIAAKVGYHDTEKAYIGGLIHDIGEVFLSYYLKDK FQKVVDAIRESPVQLVEAEERILGTTHCEVGLCLAREWHFPDDYCEIVACHHAPREATNAPRLVAIVNLADLFCTVRNLD YGGKEWTSFSLADEPAWAMIQEQGKKLAEFDVERFCYELDDQVEEIRELVTNIFKDR
Sequences:
>Translated_297_residues MEQLSKMEKAAALIRGMTDLPTIPAVATQVLSLLDQPDVEIDQVAELLLTDQVMAARVLKMVNSPLYRPATVITSLKGAL VYLGLRHIREFILTCSFIQSFEGKEGVLGVKPFWEHSFGVGIVARLIAAKVGYHDTEKAYIGGLIHDIGEVFLSYYLKDK FQKVVDAIRESPVQLVEAEERILGTTHCEVGLCLAREWHFPDDYCEIVACHHAPREATNAPRLVAIVNLADLFCTVRNLD YGGKEWTSFSLADEPAWAMIQEQGKKLAEFDVERFCYELDDQVEEIRELVTNIFKDR >Mature_297_residues MEQLSKMEKAAALIRGMTDLPTIPAVATQVLSLLDQPDVEIDQVAELLLTDQVMAARVLKMVNSPLYRPATVITSLKGAL VYLGLRHIREFILTCSFIQSFEGKEGVLGVKPFWEHSFGVGIVARLIAAKVGYHDTEKAYIGGLIHDIGEVFLSYYLKDK FQKVVDAIRESPVQLVEAEERILGTTHCEVGLCLAREWHFPDDYCEIVACHHAPREATNAPRLVAIVNLADLFCTVRNLD YGGKEWTSFSLADEPAWAMIQEQGKKLAEFDVERFCYELDDQVEEIRELVTNIFKDR
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 33446; Mature: 33446
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLSKMEKAAALIRGMTDLPTIPAVATQVLSLLDQPDVEIDQVAELLLTDQVMAARVLK CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH MVNSPLYRPATVITSLKGALVYLGLRHIREFILTCSFIQSFEGKEGVLGVKPFWEHSFGV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCH GIVARLIAAKVGYHDTEKAYIGGLIHDIGEVFLSYYLKDKFQKVVDAIRESPVQLVEAEE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH RILGTTHCEVGLCLAREWHFPDDYCEIVACHHAPREATNAPRLVAIVNLADLFCTVRNLD HHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC YGGKEWTSFSLADEPAWAMIQEQGKKLAEFDVERFCYELDDQVEEIRELVTNIFKDR CCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEQLSKMEKAAALIRGMTDLPTIPAVATQVLSLLDQPDVEIDQVAELLLTDQVMAARVLK CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH MVNSPLYRPATVITSLKGALVYLGLRHIREFILTCSFIQSFEGKEGVLGVKPFWEHSFGV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCH GIVARLIAAKVGYHDTEKAYIGGLIHDIGEVFLSYYLKDKFQKVVDAIRESPVQLVEAEE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH RILGTTHCEVGLCLAREWHFPDDYCEIVACHHAPREATNAPRLVAIVNLADLFCTVRNLD HHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC YGGKEWTSFSLADEPAWAMIQEQGKKLAEFDVERFCYELDDQVEEIRELVTNIFKDR CCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]