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The map label for this gene is 78224356

Identifier: 78224356

GI number: 78224356

Start: 3563325

End: 3563612

Strand: Direct

Name: 78224356

Synonym: Gmet_3165

Alternate gene names: NA

Gene position: 3563325-3563612 (Clockwise)

Preceding gene: 78224353

Following gene: 78224357

Centisome position: 89.14

GC content: 61.11

Gene sequence:

>288_bases
ATGGAACGTAAAATTCATGCCGCAGCTGTGGTGGCCATACTGATCCTCGGTGCCGGAGCCGCCAGCGCCATCGAGACCAT
TACCTTTCCGAACCGGATCGGCCAGGTGAGCTTCCCCCACAAGAAGCACCAGGATGCCCTGGGCCAGTGCCGGGGATGTC
ACGAAAAGGGACCGGGAGAGATCGACGGCTTCGACAAGGTGCTGGCCCACGGCAAAGGGTGCAAAGGGTGCCACGAAGCC
ATGAAGAGGGGACCGGTCCTCTGCAAGGGATGTCACGGAGGTGGCTAA

Upstream 100 bases:

>100_bases
TTCAGACGCCAGGTGCTCAGCCACGGGCAAGAAACTTGCAGTACTGGATTCCCGTCCCGGGGTAATGCCCTGGGCAAAGC
CTTCCTAAGGAGCTGACGCG

Downstream 100 bases:

>100_bases
CTCGTTGATTTTTTGTCTATGACGACCCGACATCGGGTCACATTCCGGTCGATATCGATACCAGAGGCATGGGATATCCC
ATACAATGACCCCATGCGGT

Product: cytochrome c3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MERKIHAAAVVAILILGAGAASAIETITFPNRIGQVSFPHKKHQDALGQCRGCHEKGPGEIDGFDKVLAHGKGCKGCHEA
MKRGPVLCKGCHGGG

Sequences:

>Translated_95_residues
MERKIHAAAVVAILILGAGAASAIETITFPNRIGQVSFPHKKHQDALGQCRGCHEKGPGEIDGFDKVLAHGKGCKGCHEA
MKRGPVLCKGCHGGG
>Mature_95_residues
MERKIHAAAVVAILILGAGAASAIETITFPNRIGQVSFPHKKHQDALGQCRGCHEKGPGEIDGFDKVLAHGKGCKGCHEA
MKRGPVLCKGCHGGG

Specific function: May be involved in anaerobic iron respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002322
- InterPro:   IPR020942 [H]

Pfam domain/function: PF02085 Cytochrom_CIII [H]

EC number: NA

Molecular weight: Translated: 9882; Mature: 9882

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKIHAAAVVAILILGAGAASAIETITFPNRIGQVSFPHKKHQDALGQCRGCHEKGPGE
CCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
IDGFDKVLAHGKGCKGCHEAMKRGPVLCKGCHGGG
CCHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure
MERKIHAAAVVAILILGAGAASAIETITFPNRIGQVSFPHKKHQDALGQCRGCHEKGPGE
CCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
IDGFDKVLAHGKGCKGCHEAMKRGPVLCKGCHGGG
CCHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA