| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224242
Identifier: 78224242
GI number: 78224242
Start: 3437926
End: 3439119
Strand: Direct
Name: 78224242
Synonym: Gmet_3049
Alternate gene names: NA
Gene position: 3437926-3439119 (Clockwise)
Preceding gene: 78224241
Following gene: 78224243
Centisome position: 86.0
GC content: 52.93
Gene sequence:
>1194_bases GTGACCAAGCTGGTGTACAAGGTTCGCAGGAGGGGGGCATACGCCCACTACAACTTCCCCCTCAAGCTGCGGCCCCAGAA GGATGAACTCCTGAGTTCCTGGCTCATCCGCCTGGCCCTGCGGCACCGAACCATGCCGATGACGTTCACCAACCTGTACA TGCCGGAGACCAAGAACATGTTATGGTCTGTCGACATGGACCTGCAGTCAGCCCCGGATTTCCTGTCGACATTGGCAACG AAAAGCGGTGCGCCGTTGGAAGCACTGCAGGCAATGACGCTTGAGGGTTATGAAGGGTATCTGTTCGAAAAGGCTTTTAC GAAGACTGGGGGTACGCAGTTTATCTTGCCGCTTCGGATGCGTGGGCGTCAGAACACCTCACACGGCCTTCGCTTCTGCC CCGTATGCCTGCGGGAAGATGAACAGCCTTACTTCAGGCGAAAGTGGCGGCTTTCGTTTTCAACTGCCTGTGTGCGGCAT AAATGCTTTCTTCGGGACAGGTGCCCGGCCTGCCTGGCTCCGCTCACCGTTTACCGCAGACCTTCGGTGGTGGACTTCCC GAACTGCGACAAATGCGGCTTCCCGCTTAAAAGTGCCGAAGTCGAACCGATCGCCAGGGGCTCATACGGGTTGAAAGCAA TTAAACGCATGTATGCGATTCTAGGCTGCGGGTTTATCATGCTCGGAGAGGTGCCTGTCTACTCATTCCTCTTTTTTATC ATCATCCACCAACTATGGAAGGCTGCCCATTTCTGGGATAAGACCGACGGCTTCTTGCATCATGAAGTAATGAAAGACCG CGTCGACGACCTGACATGGGAACTCAAACCCACTGTTTTGGATCAAATTCGCCTGAAGGAGCAGTATCTGTTTTTTTCCG GACTGATGCACCTGTTCGAGGATTACCCGCACAGACTGATGGATTACTGCCGCCGGAACCGATTTGGCAAGACGGAACTT ACGAGGGATTTGCGTATCGTTCCTTATTGGTATTCCAAGATCGTCGACCGATTTGACCATACGTTTTGGCCTTTAAGCTG TGACGAGGTCTCGAGTGTATTGGAATATATGAAATCCAAAGACATGGATGTGCAATTGGATCGAGTGAAATCGCTTATAG GTAGGGGGATCGACTTCAGGAAGCGAACAGACATCGCAAAGGTCTTTGGCGCCGCTGGGAGTCGCGTGACATAA
Upstream 100 bases:
>100_bases CGATCAATGGCGGGAAGGAGCAGATTACTGCAGAAGAAATCAAAGGCTGCGACTTCACCCCGTCGTCAAAGAGACAACCG CCGGCGGAACGAGGCCTCAA
Downstream 100 bases:
>100_bases TATGGATATGAAATTTGTTCGGAAGCGATCTAATCACCGGTTTCACCAAAAAGGTCGAAATCTGACACCTTGACATCCTT TACCATTAACGACCTCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MTKLVYKVRRRGAYAHYNFPLKLRPQKDELLSSWLIRLALRHRTMPMTFTNLYMPETKNMLWSVDMDLQSAPDFLSTLAT KSGAPLEALQAMTLEGYEGYLFEKAFTKTGGTQFILPLRMRGRQNTSHGLRFCPVCLREDEQPYFRRKWRLSFSTACVRH KCFLRDRCPACLAPLTVYRRPSVVDFPNCDKCGFPLKSAEVEPIARGSYGLKAIKRMYAILGCGFIMLGEVPVYSFLFFI IIHQLWKAAHFWDKTDGFLHHEVMKDRVDDLTWELKPTVLDQIRLKEQYLFFSGLMHLFEDYPHRLMDYCRRNRFGKTEL TRDLRIVPYWYSKIVDRFDHTFWPLSCDEVSSVLEYMKSKDMDVQLDRVKSLIGRGIDFRKRTDIAKVFGAAGSRVT
Sequences:
>Translated_397_residues MTKLVYKVRRRGAYAHYNFPLKLRPQKDELLSSWLIRLALRHRTMPMTFTNLYMPETKNMLWSVDMDLQSAPDFLSTLAT KSGAPLEALQAMTLEGYEGYLFEKAFTKTGGTQFILPLRMRGRQNTSHGLRFCPVCLREDEQPYFRRKWRLSFSTACVRH KCFLRDRCPACLAPLTVYRRPSVVDFPNCDKCGFPLKSAEVEPIARGSYGLKAIKRMYAILGCGFIMLGEVPVYSFLFFI IIHQLWKAAHFWDKTDGFLHHEVMKDRVDDLTWELKPTVLDQIRLKEQYLFFSGLMHLFEDYPHRLMDYCRRNRFGKTEL TRDLRIVPYWYSKIVDRFDHTFWPLSCDEVSSVLEYMKSKDMDVQLDRVKSLIGRGIDFRKRTDIAKVFGAAGSRVT >Mature_396_residues TKLVYKVRRRGAYAHYNFPLKLRPQKDELLSSWLIRLALRHRTMPMTFTNLYMPETKNMLWSVDMDLQSAPDFLSTLATK SGAPLEALQAMTLEGYEGYLFEKAFTKTGGTQFILPLRMRGRQNTSHGLRFCPVCLREDEQPYFRRKWRLSFSTACVRHK CFLRDRCPACLAPLTVYRRPSVVDFPNCDKCGFPLKSAEVEPIARGSYGLKAIKRMYAILGCGFIMLGEVPVYSFLFFII IHQLWKAAHFWDKTDGFLHHEVMKDRVDDLTWELKPTVLDQIRLKEQYLFFSGLMHLFEDYPHRLMDYCRRNRFGKTELT RDLRIVPYWYSKIVDRFDHTFWPLSCDEVSSVLEYMKSKDMDVQLDRVKSLIGRGIDFRKRTDIAKVFGAAGSRVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46612; Mature: 46481
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLVYKVRRRGAYAHYNFPLKLRPQKDELLSSWLIRLALRHRTMPMTFTNLYMPETKNM CCHHHHHHHHCCCCEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEHHEECCCCCCE LWSVDMDLQSAPDFLSTLATKSGAPLEALQAMTLEGYEGYLFEKAFTKTGGTQFILPLRM EEEECCCHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEHH RGRQNTSHGLRFCPVCLREDEQPYFRRKWRLSFSTACVRHKCFLRDRCPACLAPLTVYRR CCCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PSVVDFPNCDKCGFPLKSAEVEPIARGSYGLKAIKRMYAILGCGFIMLGEVPVYSFLFFI CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH IIHQLWKAAHFWDKTDGFLHHEVMKDRVDDLTWELKPTVLDQIRLKEQYLFFSGLMHLFE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHH DYPHRLMDYCRRNRFGKTELTRDLRIVPYWYSKIVDRFDHTFWPLSCDEVSSVLEYMKSK HHHHHHHHHHHHCCCCCHHHCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC DMDVQLDRVKSLIGRGIDFRKRTDIAKVFGAAGSRVT CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TKLVYKVRRRGAYAHYNFPLKLRPQKDELLSSWLIRLALRHRTMPMTFTNLYMPETKNM CHHHHHHHHCCCCEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEHHEECCCCCCE LWSVDMDLQSAPDFLSTLATKSGAPLEALQAMTLEGYEGYLFEKAFTKTGGTQFILPLRM EEEECCCHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEHH RGRQNTSHGLRFCPVCLREDEQPYFRRKWRLSFSTACVRHKCFLRDRCPACLAPLTVYRR CCCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PSVVDFPNCDKCGFPLKSAEVEPIARGSYGLKAIKRMYAILGCGFIMLGEVPVYSFLFFI CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH IIHQLWKAAHFWDKTDGFLHHEVMKDRVDDLTWELKPTVLDQIRLKEQYLFFSGLMHLFE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHH DYPHRLMDYCRRNRFGKTELTRDLRIVPYWYSKIVDRFDHTFWPLSCDEVSSVLEYMKSK HHHHHHHHHHHHCCCCCHHHCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC DMDVQLDRVKSLIGRGIDFRKRTDIAKVFGAAGSRVT CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA