| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is macB [H]
Identifier: 78224229
GI number: 78224229
Start: 3421619
End: 3422848
Strand: Reverse
Name: macB [H]
Synonym: Gmet_3036
Alternate gene names: 78224229
Gene position: 3422848-3421619 (Counterclockwise)
Preceding gene: 78224230
Following gene: 78224227
Centisome position: 85.63
GC content: 64.31
Gene sequence:
>1230_bases ATGACGACCCTCTGGCAAAGTCTCCTGATCGCCCTCCGGGCGCTGCGGGTCAACAAGATGCGGGCACTCCTGACCATGCT TGGCATCATCATCGGGATCGCCGCCGTCATCGCCATGGTGGCCATTGGTGCCGGGGCGAGCAAGATGATCTCCGACCAGA TCTCCAGCATCGGGAGCAACCTCCTCCTGGTCCTTCCCGGCTCCACCACCAGCGGGGGGCTGCGGACCGGGGCCGGCGGC ACCCCGACCCTCACCTACGACGACGCCCGGGCCATCAAGGCGGAATGCCCGTCGGTGGAGAATGTGGCCCCTACGGTGCG GGGCTCGGCCCAGATCGTCTACGGCAATCAGAACTGGTCCACCATCGTCATGGGGTGCACCCCCGAGATGGTCGTCGTCC GGGACTGGTCCCTGACAACCGGCAGAAACATCTCTCTGTCCGATGTGGACGGCGCCACCAAGAACTGTCTCATTGGCCAG ACCGTGGCCGAGAACCTTTTCGGCGATGCTGATCCCATCGGCAAGATCATCCGGATCAAGAAGATACCGTTCACCGTCAT CGGGATACTGGACCACAAGGGGCAGTCTCCCCAGGGGACAGATCAGGACGACGTGATCTTCGTGCCGCTGCGCACTGCCC AGCGCAAGCTCTTCGGCAGCCAGTTCCCCAACACGGTGGGCGCCATGATGATCCAGGCGAAAAGCGCCGATGTTCTCAAA AAGGCCGAGGAAGAGGTGACCGCGCTCCTGGACCAGCGCCACCGGATCGGTCCGAGCCGGGAGCGGGACTTCACGGTGCG CAACCTGTCGGAGATCCTCGCGGTATCGGAACAGTCCTCCAAGGTCATGTCGATCCTCCTGGGGGCCGTGGCCTCCATCT CCCTGGTCGTCGGCGGCATCGGCATCATGAACATCATGCTTGTCTCGGTCACGGAGCGGACCCGGGAGATCGGCATCCGG ATGGCCATCGGCGCCAAACAACGGGACATCCTCCTCCAGTTCCTGACCGAGGCGGTGCTCCTCACCACGGCGGGGGGGAT CATCGGCATGGGGCTCGGGGTGGCGGGGGCCATGGCGGTCTCGAAGATCATGCAGTGGCCGACCCTGATCTCCACGCAGG CAATCATCATCGCTTTCCTCTTCTCCGCCGGCGTCGGCGTCTTCTTCGGCTTCTACCCGGCCCGCAAGGCGGCCAACCTG AACCCCATCGAGGCGCTGCGGTACGAGTGA
Upstream 100 bases:
>100_bases CCTTCACCGGCCGCCATCTCGTCTTCCGGGACGGCACCATCATCGCCGATTCGCCGAACGCCTCCCCTGCCGTGGCGTCG CCGGCCCAGGGAGAGGCCCC
Downstream 100 bases:
>100_bases GTCCCGCCAGGGACGCAATGAACGAAAAAAGGGGAAAGGCTGGTCGGCCTTTCCCCTTTTTCGCTCTATCCATCTTGTTC TGAATGGTTCCTATTCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MTTLWQSLLIALRALRVNKMRALLTMLGIIIGIAAVIAMVAIGAGASKMISDQISSIGSNLLLVLPGSTTSGGLRTGAGG TPTLTYDDARAIKAECPSVENVAPTVRGSAQIVYGNQNWSTIVMGCTPEMVVVRDWSLTTGRNISLSDVDGATKNCLIGQ TVAENLFGDADPIGKIIRIKKIPFTVIGILDHKGQSPQGTDQDDVIFVPLRTAQRKLFGSQFPNTVGAMMIQAKSADVLK KAEEEVTALLDQRHRIGPSRERDFTVRNLSEILAVSEQSSKVMSILLGAVASISLVVGGIGIMNIMLVSVTERTREIGIR MAIGAKQRDILLQFLTEAVLLTTAGGIIGMGLGVAGAMAVSKIMQWPTLISTQAIIIAFLFSAGVGVFFGFYPARKAANL NPIEALRYE
Sequences:
>Translated_409_residues MTTLWQSLLIALRALRVNKMRALLTMLGIIIGIAAVIAMVAIGAGASKMISDQISSIGSNLLLVLPGSTTSGGLRTGAGG TPTLTYDDARAIKAECPSVENVAPTVRGSAQIVYGNQNWSTIVMGCTPEMVVVRDWSLTTGRNISLSDVDGATKNCLIGQ TVAENLFGDADPIGKIIRIKKIPFTVIGILDHKGQSPQGTDQDDVIFVPLRTAQRKLFGSQFPNTVGAMMIQAKSADVLK KAEEEVTALLDQRHRIGPSRERDFTVRNLSEILAVSEQSSKVMSILLGAVASISLVVGGIGIMNIMLVSVTERTREIGIR MAIGAKQRDILLQFLTEAVLLTTAGGIIGMGLGVAGAMAVSKIMQWPTLISTQAIIIAFLFSAGVGVFFGFYPARKAANL NPIEALRYE >Mature_408_residues TTLWQSLLIALRALRVNKMRALLTMLGIIIGIAAVIAMVAIGAGASKMISDQISSIGSNLLLVLPGSTTSGGLRTGAGGT PTLTYDDARAIKAECPSVENVAPTVRGSAQIVYGNQNWSTIVMGCTPEMVVVRDWSLTTGRNISLSDVDGATKNCLIGQT VAENLFGDADPIGKIIRIKKIPFTVIGILDHKGQSPQGTDQDDVIFVPLRTAQRKLFGSQFPNTVGAMMIQAKSADVLKK AEEEVTALLDQRHRIGPSRERDFTVRNLSEILAVSEQSSKVMSILLGAVASISLVVGGIGIMNIMLVSVTERTREIGIRM AIGAKQRDILLQFLTEAVLLTTAGGIIGMGLGVAGAMAVSKIMQWPTLISTQAIIIAFLFSAGVGVFFGFYPARKAANLN PIEALRYE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=406, Percent_Identity=36.6995073891626, Blast_Score=222, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 43469; Mature: 43337
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLWQSLLIALRALRVNKMRALLTMLGIIIGIAAVIAMVAIGAGASKMISDQISSIGSN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC LLLVLPGSTTSGGLRTGAGGTPTLTYDDARAIKAECPSVENVAPTVRGSAQIVYGNQNWS EEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCC TIVMGCTPEMVVVRDWSLTTGRNISLSDVDGATKNCLIGQTVAENLFGDADPIGKIIRIK EEEEECCCCEEEEEECCCCCCCCCEECCCCCCCCCCEEHHHHHHHHCCCCCCCCCEEEEE KIPFTVIGILDHKGQSPQGTDQDDVIFVPLRTAQRKLFGSQFPNTVGAMMIQAKSADVLK ECCEEEEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHEECCCHHHHH KAEEEVTALLDQRHRIGPSRERDFTVRNLSEILAVSEQSSKVMSILLGAVASISLVVGGI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIMNIMLVSVTERTREIGIRMAIGAKQRDILLQFLTEAVLLTTAGGIIGMGLGVAGAMAV HHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SKIMQWPTLISTQAIIIAFLFSAGVGVFFGFYPARKAANLNPIEALRYE HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure TTLWQSLLIALRALRVNKMRALLTMLGIIIGIAAVIAMVAIGAGASKMISDQISSIGSN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC LLLVLPGSTTSGGLRTGAGGTPTLTYDDARAIKAECPSVENVAPTVRGSAQIVYGNQNWS EEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCC TIVMGCTPEMVVVRDWSLTTGRNISLSDVDGATKNCLIGQTVAENLFGDADPIGKIIRIK EEEEECCCCEEEEEECCCCCCCCCEECCCCCCCCCCEEHHHHHHHHCCCCCCCCCEEEEE KIPFTVIGILDHKGQSPQGTDQDDVIFVPLRTAQRKLFGSQFPNTVGAMMIQAKSADVLK ECCEEEEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHEECCCHHHHH KAEEEVTALLDQRHRIGPSRERDFTVRNLSEILAVSEQSSKVMSILLGAVASISLVVGGI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIMNIMLVSVTERTREIGIRMAIGAKQRDILLQFLTEAVLLTTAGGIIGMGLGVAGAMAV HHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SKIMQWPTLISTQAIIIAFLFSAGVGVFFGFYPARKAANLNPIEALRYE HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA