| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224166
Identifier: 78224166
GI number: 78224166
Start: 3360000
End: 3360278
Strand: Reverse
Name: 78224166
Synonym: Gmet_2973
Alternate gene names: NA
Gene position: 3360278-3360000 (Counterclockwise)
Preceding gene: 78224167
Following gene: 78224165
Centisome position: 84.06
GC content: 57.35
Gene sequence:
>279_bases ATGATCAAGTCATTCCGCTGCAAGGACACCCAGGCTTTGTTCGAGGGGAAATGCCCGCGTCGGTTCAAGGCGTTCTCTAC GGTTGCCGAGCGAAAGCTGCAAATGCTTGATGACGCCCACTCGCCCGAAGATCTCCGCTCGCCCCCGGGCAACCGCCTGG AAGTCTTGCGCGGTGACCGCAAAGGACAGTGGAGCATCCGGATCAACGATCAGTGGCGCCTTTGCTTTCGCTTTGAGGAT GGCAACGCCTTTGATGTGGAGATCGTGGATTACCATTGA
Upstream 100 bases:
>100_bases CGGCGAGCCCTTCGAGGGGGGCGAGGGGGCCACGGTGGTGCTGCTAAGGTAGGGGGTAAATCTGCTTGACGTTTAACGTG GAGCGTTATATCTTTTTGCC
Downstream 100 bases:
>100_bases GGAGATGAAACGTTATGAACCCCACCAACAGAATGCGCCCCATTCATCCCGGTGAAGTGCTGCGTGAGGAGTTCCTGATC CCCCTGGGGATGAGTGCCCA
Product: plasmid maintenance system killer
Products: NA
Alternate protein names: Plasmid Maintenance System Killer Protein; Killer Protein; Plasmid Maintenance System Killer Family Protein; Xin-Antitoxin System Toxin Component RelE Family; Proteic Killer Protein; Plasmid Maintenance System Protein; Xin HigB; Plantaricin Biosynthesis Protein PlnX; Xin Of Plasmid Maintenance System
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MIKSFRCKDTQALFEGKCPRRFKAFSTVAERKLQMLDDAHSPEDLRSPPGNRLEVLRGDRKGQWSIRINDQWRLCFRFED GNAFDVEIVDYH
Sequences:
>Translated_92_residues MIKSFRCKDTQALFEGKCPRRFKAFSTVAERKLQMLDDAHSPEDLRSPPGNRLEVLRGDRKGQWSIRINDQWRLCFRFED GNAFDVEIVDYH >Mature_92_residues MIKSFRCKDTQALFEGKCPRRFKAFSTVAERKLQMLDDAHSPEDLRSPPGNRLEVLRGDRKGQWSIRINDQWRLCFRFED GNAFDVEIVDYH
Specific function: Unknown
COG id: COG3549
COG function: function code R; Plasmid maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10890; Mature: 10890
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSFRCKDTQALFEGKCPRRFKAFSTVAERKLQMLDDAHSPEDLRSPPGNRLEVLRGDR CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCC KGQWSIRINDQWRLCFRFEDGNAFDVEIVDYH CCEEEEEECCCEEEEEEECCCCEEEEEEEECC >Mature Secondary Structure MIKSFRCKDTQALFEGKCPRRFKAFSTVAERKLQMLDDAHSPEDLRSPPGNRLEVLRGDR CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCC KGQWSIRINDQWRLCFRFEDGNAFDVEIVDYH CCEEEEEECCCEEEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA