| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224163
Identifier: 78224163
GI number: 78224163
Start: 3357345
End: 3358025
Strand: Reverse
Name: 78224163
Synonym: Gmet_2970
Alternate gene names: NA
Gene position: 3358025-3357345 (Counterclockwise)
Preceding gene: 78224165
Following gene: 78224162
Centisome position: 84.0
GC content: 69.16
Gene sequence:
>681_bases GTGTTTCAGGACCCGACCGACGAGTACATCCGCACCATCACCGCCCACTGCGACCTGGCGGGGAAAGAGGTCCTCGAAGT GGGGTGCGGCACCGGCCGCATCACCCGTGATCTGGCCCGCCACGCCCGCCGGGTCGTGGCCGTGGATCCCGACGAAACTG CCCTGGCAAAGGCCCGCTCCGCCGTCCCCGCCCCCAACGTCCAATTCCTCCCCATGCCCGATGGCGTCCTCCACTTCCCC CCCGCCTCCTTCGATGTGGTCATCCATACCCTCTCCCTCCACCATGTTCCCCTCGATCGGATGAACGAAAGCCTCCGCGC CGCCGCCGGCCTTGTGCGGGACGGGGGCGTCATCGTCGTGGTGGAGCCCGGCGACGGCGGCTCCTTCACCGAGGCCAAGG AGCGCTTCGGCGCCGGCAGCGGCGACGAGCGCCCCGGCCGGGAAGCCGCCATCCGCGCCATGCACGGGCTTGACGGCTGG ACCGTGGGGGAGACGGTCCTCTTCCGGGTCCGGTTCCTCTTTGCCGACGAGGATGACTTCATCGCCACGAAGCTCCCCGG CTTTGGGGAGAAGCCGGAGGCGTTCCAGCAGGAGGTGCGGGAGTTTCTGGCCCGGCACCGGACGGCGGAGGGGGTTGTGC TTGATGCGGGGCGGAGGTTGAATGTTTTACGGCGGGGATGA
Upstream 100 bases:
>100_bases CCTCCCTGTCAGGGGGGCAATGTCCGGGTGAAATTGTACCCCCCGGCAGGTTTGGTAACTGTAATTTTTATGTAAAACAG GGGTAAACGAGGGAATTGCC
Downstream 100 bases:
>100_bases AGAGAATAAAAATGAAGTGTTGTAGGTGTTGACAACACTAATTGCCGTTGTTACTCTCTCCAACATGAATGCGAAACTTC TTCTGAACGAACGCCACATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MFQDPTDEYIRTITAHCDLAGKEVLEVGCGTGRITRDLARHARRVVAVDPDETALAKARSAVPAPNVQFLPMPDGVLHFP PASFDVVIHTLSLHHVPLDRMNESLRAAAGLVRDGGVIVVVEPGDGGSFTEAKERFGAGSGDERPGREAAIRAMHGLDGW TVGETVLFRVRFLFADEDDFIATKLPGFGEKPEAFQQEVREFLARHRTAEGVVLDAGRRLNVLRRG
Sequences:
>Translated_226_residues MFQDPTDEYIRTITAHCDLAGKEVLEVGCGTGRITRDLARHARRVVAVDPDETALAKARSAVPAPNVQFLPMPDGVLHFP PASFDVVIHTLSLHHVPLDRMNESLRAAAGLVRDGGVIVVVEPGDGGSFTEAKERFGAGSGDERPGREAAIRAMHGLDGW TVGETVLFRVRFLFADEDDFIATKLPGFGEKPEAFQQEVREFLARHRTAEGVVLDAGRRLNVLRRG >Mature_226_residues MFQDPTDEYIRTITAHCDLAGKEVLEVGCGTGRITRDLARHARRVVAVDPDETALAKARSAVPAPNVQFLPMPDGVLHFP PASFDVVIHTLSLHHVPLDRMNESLRAAAGLVRDGGVIVVVEPGDGGSFTEAKERFGAGSGDERPGREAAIRAMHGLDGW TVGETVLFRVRFLFADEDDFIATKLPGFGEKPEAFQQEVREFLARHRTAEGVVLDAGRRLNVLRRG
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24658; Mature: 24658
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQDPTDEYIRTITAHCDLAGKEVLEVGCGTGRITRDLARHARRVVAVDPDETALAKARS CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCEEEEECCCHHHHHHHHH AVPAPNVQFLPMPDGVLHFPPASFDVVIHTLSLHHVPLDRMNESLRAAAGLVRDGGVIVV CCCCCCEEEEECCCCEEECCCCCHHHEEEEHHHCCCCHHHHHHHHHHHHHHEECCCEEEE VEPGDGGSFTEAKERFGAGSGDERPGREAAIRAMHGLDGWTVGETVLFRVRFLFADEDDF EECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCE IATKLPGFGEKPEAFQQEVREFLARHRTAEGVVLDAGRRLNVLRRG EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCEECCEECC >Mature Secondary Structure MFQDPTDEYIRTITAHCDLAGKEVLEVGCGTGRITRDLARHARRVVAVDPDETALAKARS CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCEEEEECCCHHHHHHHHH AVPAPNVQFLPMPDGVLHFPPASFDVVIHTLSLHHVPLDRMNESLRAAAGLVRDGGVIVV CCCCCCEEEEECCCCEEECCCCCHHHEEEEHHHCCCCHHHHHHHHHHHHHHEECCCEEEE VEPGDGGSFTEAKERFGAGSGDERPGREAAIRAMHGLDGWTVGETVLFRVRFLFADEDDF EECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCE IATKLPGFGEKPEAFQQEVREFLARHRTAEGVVLDAGRRLNVLRRG EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA