| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224158
Identifier: 78224158
GI number: 78224158
Start: 3353486
End: 3354130
Strand: Reverse
Name: 78224158
Synonym: Gmet_2965
Alternate gene names: NA
Gene position: 3354130-3353486 (Counterclockwise)
Preceding gene: 78224159
Following gene: 78224157
Centisome position: 83.91
GC content: 42.64
Gene sequence:
>645_bases ATGAACGAACCAATTACAAATGTCACACTGCGAGTACATGTCGGAGATTATATCAAAGAAATTACTCATGAGCGATTAGC TGATTTCGCCGACCTAACAGGACTTGATGCAGTAGCACCCAATCGATATTCATGGCTGCTTGTGGTGGATATGTTGGTAA ATTTGGAAGTAAATGGCATCGACCCAACACAAATCGTTCAAGAAATTAAAGCATTGGAAAGCAGTAGTCATACCAGTTTC GTCAAACCTGCTACGCAGTTTAAACATCCTCCACTACATCCATTATGGCACAAGCACTACTTTTCAGCTCATTTCGTGCC TCACAACATACATGCAGAGTTAAATCGCGGAGGAAAGCTCGAAAATTTAGTAAACGAAGTATTAGATCCCAATAAGTCAC CTATCATTACGCGTGAGATGATAAACGAGTTGGCGCATCGTGTCGTCCACGAACCTTTTGAGGCTCGTTCCGATGAAGGA CGTATGACTGGAGAATGGCTCATCTTCGCCAAACAAGATGGAAACAATTACTATTTATGTATGGCAACACATGATGCTGG AGATCAGGCCATCTACGACAAACTCGCATATGCTGTTAAACGTCAATTCCCTATGCTTGAGCCATTTGCAAGCGCACGAA CATAG
Upstream 100 bases:
>100_bases CCTGAAGCAATGCCGCGGAGTGGTCGAAATAAAGATCGCGCAAGAGATGATGAGATATAAAAGCGATTAGGGCTTCTTCA GTAAAAATAGGAGCAATAAT
Downstream 100 bases:
>100_bases AGAGGACAGGGTATAACCACGCCCTTGGACACCGACCGCCCAAAGAAACTGGGCGGGCGGGTCAAGTCCGGTCCAGTTGG TAGGCTAAACAAGTCGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNEPITNVTLRVHVGDYIKEITHERLADFADLTGLDAVAPNRYSWLLVVDMLVNLEVNGIDPTQIVQEIKALESSSHTSF VKPATQFKHPPLHPLWHKHYFSAHFVPHNIHAELNRGGKLENLVNEVLDPNKSPIITREMINELAHRVVHEPFEARSDEG RMTGEWLIFAKQDGNNYYLCMATHDAGDQAIYDKLAYAVKRQFPMLEPFASART
Sequences:
>Translated_214_residues MNEPITNVTLRVHVGDYIKEITHERLADFADLTGLDAVAPNRYSWLLVVDMLVNLEVNGIDPTQIVQEIKALESSSHTSF VKPATQFKHPPLHPLWHKHYFSAHFVPHNIHAELNRGGKLENLVNEVLDPNKSPIITREMINELAHRVVHEPFEARSDEG RMTGEWLIFAKQDGNNYYLCMATHDAGDQAIYDKLAYAVKRQFPMLEPFASART >Mature_214_residues MNEPITNVTLRVHVGDYIKEITHERLADFADLTGLDAVAPNRYSWLLVVDMLVNLEVNGIDPTQIVQEIKALESSSHTSF VKPATQFKHPPLHPLWHKHYFSAHFVPHNIHAELNRGGKLENLVNEVLDPNKSPIITREMINELAHRVVHEPFEARSDEG RMTGEWLIFAKQDGNNYYLCMATHDAGDQAIYDKLAYAVKRQFPMLEPFASART
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24418; Mature: 24418
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPITNVTLRVHVGDYIKEITHERLADFADLTGLDAVAPNRYSWLLVVDMLVNLEVNGI CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEHHHHCEECCC DPTQIVQEIKALESSSHTSFVKPATQFKHPPLHPLWHKHYFSAHFVPHNIHAELNRGGKL CHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHEECCCCCCCHHHCCCCCCH ENLVNEVLDPNKSPIITREMINELAHRVVHEPFEARSDEGRMTGEWLIFAKQDGNNYYLC HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEEEEECCCEEEEE MATHDAGDQAIYDKLAYAVKRQFPMLEPFASART EEECCCCCHHHHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure MNEPITNVTLRVHVGDYIKEITHERLADFADLTGLDAVAPNRYSWLLVVDMLVNLEVNGI CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEHHHHCEECCC DPTQIVQEIKALESSSHTSFVKPATQFKHPPLHPLWHKHYFSAHFVPHNIHAELNRGGKL CHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHEECCCCCCCHHHCCCCCCH ENLVNEVLDPNKSPIITREMINELAHRVVHEPFEARSDEGRMTGEWLIFAKQDGNNYYLC HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEEEEECCCEEEEE MATHDAGDQAIYDKLAYAVKRQFPMLEPFASART EEECCCCCHHHHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA