| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224156
Identifier: 78224156
GI number: 78224156
Start: 3349930
End: 3350211
Strand: Reverse
Name: 78224156
Synonym: Gmet_2961
Alternate gene names: NA
Gene position: 3350211-3349930 (Counterclockwise)
Preceding gene: 78224157
Following gene: 78224155
Centisome position: 83.81
GC content: 52.13
Gene sequence:
>282_bases ATGAAAAACGAACATGTAGGATCGAGCTTTGACGACTTTCTTGAAGAAGAAGGGCTGCGTGCGGAGGCGGAAGCTGCCGC AATCAAGAGGGTTATCGCATTCCAGATAGAGCAGGAGATGAAACTGGCGAATCTCTCAAAAACCGCCATGGCTGAAAGGA TGTGCACCAGTCGCACTGCCCTTGACAGGCTCCTTGATCCCGCCAATGTTTCCGTTACCCTCCAAACCCTCGAAAGAGCG GCCCTTGCCCTCGGCAAAAGCCTGAAAATTGAACTGGCATGA
Upstream 100 bases:
>100_bases TGATCTTACTGCATGGCTTCATCAAGAAATCTCAAAAGACCCCACAAAACGAACTGAAGACGGCATTAAGCCGCCTTGGC AATTGCAAGAGAGGCACAAA
Downstream 100 bases:
>100_bases CCACGCACTCAGACCGGGCGGGGAATCCGCCCGGCAGGTCAATCCCCCGCTCCATTAGTTCCCAAGTACGGAGATCATCA TGGCATGGTTTTACCTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKNEHVGSSFDDFLEEEGLRAEAEAAAIKRVIAFQIEQEMKLANLSKTAMAERMCTSRTALDRLLDPANVSVTLQTLERA ALALGKSLKIELA
Sequences:
>Translated_93_residues MKNEHVGSSFDDFLEEEGLRAEAEAAAIKRVIAFQIEQEMKLANLSKTAMAERMCTSRTALDRLLDPANVSVTLQTLERA ALALGKSLKIELA >Mature_93_residues MKNEHVGSSFDDFLEEEGLRAEAEAAAIKRVIAFQIEQEMKLANLSKTAMAERMCTSRTALDRLLDPANVSVTLQTLERA ALALGKSLKIELA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10221; Mature: 10221
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNEHVGSSFDDFLEEEGLRAEAEAAAIKRVIAFQIEQEMKLANLSKTAMAERMCTSRTA CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRLLDPANVSVTLQTLERAALALGKSLKIELA HHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure MKNEHVGSSFDDFLEEEGLRAEAEAAAIKRVIAFQIEQEMKLANLSKTAMAERMCTSRTA CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRLLDPANVSVTLQTLERAALALGKSLKIELA HHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA