| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224063
Identifier: 78224063
GI number: 78224063
Start: 3250442
End: 3251023
Strand: Reverse
Name: 78224063
Synonym: Gmet_2867
Alternate gene names: NA
Gene position: 3251023-3250442 (Counterclockwise)
Preceding gene: 78224064
Following gene: 78224062
Centisome position: 81.33
GC content: 57.39
Gene sequence:
>582_bases GTGAGCGGGGCGACTCTTTCCAATGCCAATGTGAGTGTCGCGCTCCTCCACCATCCGGTTTATGACAAAAATCGGCAGGT GGTCTCCACGGCGGTAACGAATCTCGACATTCACGATATCGCGCGGTCAGCGAGAACCTTCGGGCTGCTCAGCTACTACA TCGTGACGCCAGTTCCCGGACAACAGGAACTTGCAGGCCGAATCGTCCGGCATTGGCAGGAGGGATGGGGTGCCACATAT AATCCCAAGCGGAAGGCTGCGCTTGAGCTCATAAAGATCGCCGCAACTCTAAATGATGCCCTGGAGGATATGCAAGAGCG CTTCGGACGGCCAGTTCGGCTCGTGACGACCGGAGCACGACTCCATCCCCGAAGCGTCACATTCAGCGACCTGCAGCACC TCATTACCGAGCGGGATCAGCCCTATCTGCTCCTTTTCGGTACCGGTTGGGGGCTCGTCGAAGAGGTGTTTGAAAAGGCC GACCTGGTTCTCGAGCCGATCCAAGGGGCTGGAGATTACAACCATCTCTCGGTGAGGTCTGCGGCAGCAATCATCATGGA TAGACTGTTCGGAGCGCGTTGA
Upstream 100 bases:
>100_bases TGGAGGAAACGATCCGTTCGAGACCGGATTTGCTCGAAAAGGCAGTGCTGGATAGTGACGACCGGCGCTACCTGCTAGAA CTCGAAGAGGGAGCCTCGAA
Downstream 100 bases:
>100_bases GCGTCTCCGTTCGTAATATACGAAACCAGTACGCGTTTGCGCACATAAAGGGAGGAAGACGCAGATGAACACTATCGACA TGCTTGAACTTGAACAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSGATLSNANVSVALLHHPVYDKNRQVVSTAVTNLDIHDIARSARTFGLLSYYIVTPVPGQQELAGRIVRHWQEGWGATY NPKRKAALELIKIAATLNDALEDMQERFGRPVRLVTTGARLHPRSVTFSDLQHLITERDQPYLLLFGTGWGLVEEVFEKA DLVLEPIQGAGDYNHLSVRSAAAIIMDRLFGAR
Sequences:
>Translated_193_residues MSGATLSNANVSVALLHHPVYDKNRQVVSTAVTNLDIHDIARSARTFGLLSYYIVTPVPGQQELAGRIVRHWQEGWGATY NPKRKAALELIKIAATLNDALEDMQERFGRPVRLVTTGARLHPRSVTFSDLQHLITERDQPYLLLFGTGWGLVEEVFEKA DLVLEPIQGAGDYNHLSVRSAAAIIMDRLFGAR >Mature_192_residues SGATLSNANVSVALLHHPVYDKNRQVVSTAVTNLDIHDIARSARTFGLLSYYIVTPVPGQQELAGRIVRHWQEGWGATYN PKRKAALELIKIAATLNDALEDMQERFGRPVRLVTTGARLHPRSVTFSDLQHLITERDQPYLLLFGTGWGLVEEVFEKAD LVLEPIQGAGDYNHLSVRSAAAIIMDRLFGAR
Specific function: Unknown
COG id: COG4752
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.aeolicus AQ_054 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019230 [H]
Pfam domain/function: PF09936 DUF2168 [H]
EC number: NA
Molecular weight: Translated: 21444; Mature: 21313
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGATLSNANVSVALLHHPVYDKNRQVVSTAVTNLDIHDIARSARTFGLLSYYIVTPVPG CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCC QQELAGRIVRHWQEGWGATYNPKRKAALELIKIAATLNDALEDMQERFGRPVRLVTTGAR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE LHPRSVTFSDLQHLITERDQPYLLLFGTGWGLVEEVFEKADLVLEPIQGAGDYNHLSVRS ECCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHH AAAIIMDRLFGAR HHHHHHHHHHCCC >Mature Secondary Structure SGATLSNANVSVALLHHPVYDKNRQVVSTAVTNLDIHDIARSARTFGLLSYYIVTPVPG CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCC QQELAGRIVRHWQEGWGATYNPKRKAALELIKIAATLNDALEDMQERFGRPVRLVTTGAR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE LHPRSVTFSDLQHLITERDQPYLLLFGTGWGLVEEVFEKADLVLEPIQGAGDYNHLSVRS ECCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHH AAAIIMDRLFGAR HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]