Click here to switch to the map view.

The map label for this gene is rpfG [H]

Identifier: 78224013

GI number: 78224013

Start: 3185114

End: 3186232

Strand: Direct

Name: rpfG [H]

Synonym: Gmet_2817

Alternate gene names: 78224013

Gene position: 3185114-3186232 (Clockwise)

Preceding gene: 78224012

Following gene: 78224016

Centisome position: 79.68

GC content: 65.42

Gene sequence:

>1119_bases
ATGAACCGGAGTGCCCTGGAACCGCTGCGCAACGCCGTGCGGCACCTGGTAACCGCCGTCTCCAGCGCGGCCCTCTACTC
CTTTGACCACCAGCAGGTGACGCGGCTGCGGGCCGTAACCCTTGACAACCTGACGACCACTCTGCAGGAGGAGCCCGACA
TCTCCCTCGTCATCATCGGCGACGAACTTCTTGCAGGGGGAGTCTCCCTCGATACGGGCCTCTACGTGGGGAGGTTCGTG
GAAATGCTGCGGGCGCGGGGGATAGGACACATCCGGTTTCTCCAGGGGATCACCGGGGAGGAGCTGTCATCCCTGGCCGC
CTCCCTCGGAGGAGGGCAAAAGGGGGGAGAGATCCGGTCAACGGAGCATATCCGTCTCGGCAGGGTGGAGGTGCGCTTCA
ACCGGTCCGGAGAGGGAGACGAGAAGGATCCCCTCGCCGATTTCACGACCGAGGAGGTCACCCGCATAACCGAGCTCTAC
GAGGATGTCGCCCGGAACCGGAAACTGCAGGCCGCCGGCATCGCCGACGTGGTCGGGGGGATCATCACGGCCCTGCGGGA
GCAGGCCCGCCCCCTCATGGCCCTGGCCCCCCTGCGCGACTTGGACGAATACACCTTCGCCCACTCGGTCAACGTCTGCA
TTCTCAACCTTGCCCAGGCCATGTCATTGGGAATCGACGGGCCGCTCCTGCAGGAGATCGGCATTGCCGGCCTCCTCCAC
GACATCGGCAAGATGTTCGTCCCGCGGGAGATCCTCACCAAGCCGGCGCAGCTCACCGAGGACGAATGGCGCATCATGCG
CCGCCACCCCCACCAGGGGGCCCGCTGCCTCATCGAAACGCCCGGAGTGCCCCATCTGGCAGCGGTGGCGGCCTTCGAGC
ACCACATGAAGCATGACTTCTCCGGCTATCCGGAAGTGCCCCCCGGCTGGAGCCAGAGCCTCGTCAGTGAGATGACCTCC
ATCTCCGACTTTTTCGACGCGCTTCGTACCCGCCGGGCCTACAGCGACTCCGTGGAACTGCGCCAGATCGCCGGCATGCT
CCTTGACCGGCGGGGGCGGGAGTTCCATCCTCTCCTCACCCGCAACTTTCTCCTGATCCTGAGCCGGATGATGGCGTGA

Upstream 100 bases:

>100_bases
CGGACGCGCTTTCCCTTGCCCGGGAAGCGGCCGCTTCGGGGGTACCCGAGCTGGAGCAGGCCGCCCGGCAAACCCTGCGG
ACCATGACAGGGAGGCGCCC

Downstream 100 bases:

>100_bases
TTTTCACCGCCACCGTGCAGATGTCGTCCGCAGGGGGCCTGCCGCCGGTGAATGCGGCCAGTTCCGACAGCACGGCCTCG
ATGACCGCCTCGGGCTCCTC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNRSALEPLRNAVRHLVTAVSSAALYSFDHQQVTRLRAVTLDNLTTTLQEEPDISLVIIGDELLAGGVSLDTGLYVGRFV
EMLRARGIGHIRFLQGITGEELSSLAASLGGGQKGGEIRSTEHIRLGRVEVRFNRSGEGDEKDPLADFTTEEVTRITELY
EDVARNRKLQAAGIADVVGGIITALREQARPLMALAPLRDLDEYTFAHSVNVCILNLAQAMSLGIDGPLLQEIGIAGLLH
DIGKMFVPREILTKPAQLTEDEWRIMRRHPHQGARCLIETPGVPHLAAVAAFEHHMKHDFSGYPEVPPGWSQSLVSEMTS
ISDFFDALRTRRAYSDSVELRQIAGMLLDRRGREFHPLLTRNFLLILSRMMA

Sequences:

>Translated_372_residues
MNRSALEPLRNAVRHLVTAVSSAALYSFDHQQVTRLRAVTLDNLTTTLQEEPDISLVIIGDELLAGGVSLDTGLYVGRFV
EMLRARGIGHIRFLQGITGEELSSLAASLGGGQKGGEIRSTEHIRLGRVEVRFNRSGEGDEKDPLADFTTEEVTRITELY
EDVARNRKLQAAGIADVVGGIITALREQARPLMALAPLRDLDEYTFAHSVNVCILNLAQAMSLGIDGPLLQEIGIAGLLH
DIGKMFVPREILTKPAQLTEDEWRIMRRHPHQGARCLIETPGVPHLAAVAAFEHHMKHDFSGYPEVPPGWSQSLVSEMTS
ISDFFDALRTRRAYSDSVELRQIAGMLLDRRGREFHPLLTRNFLLILSRMMA
>Mature_372_residues
MNRSALEPLRNAVRHLVTAVSSAALYSFDHQQVTRLRAVTLDNLTTTLQEEPDISLVIIGDELLAGGVSLDTGLYVGRFV
EMLRARGIGHIRFLQGITGEELSSLAASLGGGQKGGEIRSTEHIRLGRVEVRFNRSGEGDEKDPLADFTTEEVTRITELY
EDVARNRKLQAAGIADVVGGIITALREQARPLMALAPLRDLDEYTFAHSVNVCILNLAQAMSLGIDGPLLQEIGIAGLLH
DIGKMFVPREILTKPAQLTEDEWRIMRRHPHQGARCLIETPGVPHLAAVAAFEHHMKHDFSGYPEVPPGWSQSLVSEMTS
ISDFFDALRTRRAYSDSVELRQIAGMLLDRRGREFHPLLTRNFLLILSRMMA

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 41215; Mature: 41215

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSALEPLRNAVRHLVTAVSSAALYSFDHQQVTRLRAVTLDNLTTTLQEEPDISLVIIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
DELLAGGVSLDTGLYVGRFVEMLRARGIGHIRFLQGITGEELSSLAASLGGGQKGGEIRS
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
TEHIRLGRVEVRFNRSGEGDEKDPLADFTTEEVTRITELYEDVARNRKLQAAGIADVVGG
CCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IITALREQARPLMALAPLRDLDEYTFAHSVNVCILNLAQAMSLGIDGPLLQEIGIAGLLH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
DIGKMFVPREILTKPAQLTEDEWRIMRRHPHQGARCLIETPGVPHLAAVAAFEHHMKHDF
HHHHHHCCHHHHCCCHHCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC
SGYPEVPPGWSQSLVSEMTSISDFFDALRTRRAYSDSVELRQIAGMLLDRRGREFHPLLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHH
RNFLLILSRMMA
HHHHHHHHHHHC
>Mature Secondary Structure
MNRSALEPLRNAVRHLVTAVSSAALYSFDHQQVTRLRAVTLDNLTTTLQEEPDISLVIIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
DELLAGGVSLDTGLYVGRFVEMLRARGIGHIRFLQGITGEELSSLAASLGGGQKGGEIRS
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
TEHIRLGRVEVRFNRSGEGDEKDPLADFTTEEVTRITELYEDVARNRKLQAAGIADVVGG
CCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IITALREQARPLMALAPLRDLDEYTFAHSVNVCILNLAQAMSLGIDGPLLQEIGIAGLLH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
DIGKMFVPREILTKPAQLTEDEWRIMRRHPHQGARCLIETPGVPHLAAVAAFEHHMKHDF
HHHHHHCCHHHHCCCHHCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC
SGYPEVPPGWSQSLVSEMTSISDFFDALRTRRAYSDSVELRQIAGMLLDRRGREFHPLLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHH
RNFLLILSRMMA
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]