| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223996
Identifier: 78223996
GI number: 78223996
Start: 3162675
End: 3164840
Strand: Reverse
Name: 78223996
Synonym: Gmet_2800
Alternate gene names: NA
Gene position: 3164840-3162675 (Counterclockwise)
Preceding gene: 78223997
Following gene: 78223995
Centisome position: 79.17
GC content: 39.01
Gene sequence:
>2166_bases ATGGACGTCCAACAGGCCCTTGGACACCGACCGGGGCTGAGAAGCGCCCCGGGCGGGTCAAGGGCGCAAGCCGTTGTGCA AAATTTAATAAAGGGAACACGCATGTCAAATGGTGGCGGAGCAGCAACTAATACAGGGATTGATTATCAACAAAGACTTG CAGCTTACTTTTTGATCCAAATGCTACTTGACATAGAAACATTGTCAGGGATTGGACTAGATGGAGTTCATGCCATTACA GAAGTTTCCTTTGAATCTTCGTCATATGTTGATGATATGGTTGTAAAAACGACTACAGGCAATTTGTACGTCCAGGCAAA ACGTAACATTAGTATGTCTGATAGTTCAGACTCAGAATTTATGAAAACTGTTCATCAATTTGTAAATCAATTTTTACAGG ACCCATCTGGTGGACATAAATTTGTTCTGGCAACATCTTCAGGTTCATCATCAAAAATCAAGCAAGAGCTTCGAAAGATT TTAGAAAGTATCCGGTTAAATGATACTGGCTTTAAAGACAACCCACTTAATAAATCTGAAGAAGACGTATATACCAAGGT AAAGAATTGTATCAGTACGTCATACCTAGAAATTACAAATAATAATATAGCTGACACAACCATATCTGACATTTTGAGTA AAACGTATGTTGCCATTGCTGATGTACAGCAAGGCATGCCTCTTGAGGGTGCAATTCTTACTATTCTCACAAGCAAGAGC AGAGTTAAGCCCGAACTATTTTTCTCAGCTACTATTTCTTTAGCCCTCTCTTTAGCATCCGCTAGACAATCAATAAACAA ATCCGGCCTTGAATCCAAGCTTGGAAATTATATAGGCACGTTAACTCCCGAAAAAAAACATGCGGTGGAACAGGATTTTT TTAAGATCGAAATGAGCCCCGGTAAAATTTCTAGCGGAAGAGAGGTTCTCCTCGTTGAGTCATTTATTGACGGCCAGGAC TTTTTAGTTGTTGAATTAATCAGATTTGATGATTCTGGTAGCAAAAAAGTTAAGTTTCACGACAACTTATGTGAGTTGCT TAATGGCAGTACATGGAATGTTTTGTCGAGAGCTTCAACATATTCGGGTATAGAAAGATATATCGAAGAACGCGCTGATG AATTCAAAGACAAGAACATCGGCTTCTTGCCCATAAATACTGAGGAGGATATTGAGAATTCACCATTCGCACTTGCTTAT GGCGACTATTGCGAGGACATCCGAAAAGGCAATGATCAACCTTTAAGATGCCTCCACTGCGGGGACTCCATTTCAGAAAA TGGTGCGCCCTTAGTGGAGATTGACGAGATCGGAGCAGAGCATGCTCTGGGGCTTGTTCACAAAAAATGCTTAAGTCCAC TAGATAGAGTCTTGGGGGGAATCAAGGCCGAAGTGTTTGACGAGTATGATTATTTGAAAGATTTTGACTACAAAACGTGG TTTGAGTTTATCCAAACCGGACAAGCTATGTTTGGATCTTTGGAGGGCAAGCTAAATCAGATTATGTTTATGGGGTGGAA CCCTGAAGGGCATGGTGAATTTAAAGGTAATTACTGTGTAAAAATCAACCTTGAAGATGGAAGCTCGAAATATGTTCATC ATCGTAGCAAGGTAGTGAGAGAAACGCTGGAGTCTGCTACAAAAAGAGCAGATTTTTTTAACATGCAATTCGAGAAGGCC AGGATTAAAGGCGATCCCAGTTGTTATACTTCAAATAATGAAACATTTAGCTCTTACTCGGTTGCTATAAAGATGAAAGA TGAGGATGAAGAGTGTATTGAATGCATTGATGCTGAAGCAGTGAAATACACACTAGCGATTGAAAAAGCCTATGATCGCT TCACAAATTACTATGCTCCTCTATTTATATTACTAGATTTAGAAACTAGTCAGCCAATTATAATTGAAAACGCAATATTT ATTTTAAATAATCCATTAAAATTAAAAACATACTTATCTAACTGGTCTAAAGCTGGGATAGAACTGCCAGAATATAAAAT AGAGATCCTGAAAACGGACCATGAATTTGATTTATTTTTGTCTAGATATTTGAAGAAGGGCATCCAAATTGTTGCTAACC CGCTTTTTGATATGGTTCTCAACCCTTTAAGTGGCCTTGTATTCAGACATATCGACGAAATTCTTGAAGAGAAGGCGAAG AGATGA
Upstream 100 bases:
>100_bases TCGACTTACAAATCATTTGGTTTCTTTTTGCCGATTGCATCCAGAAGTAATCCAATTGCAAAAGGATGAGAGACAATACA GATAGTAATCCACAGGCAGG
Downstream 100 bases:
>100_bases TGCCAACATGCGGCGGCACGCGGTCTCCGCTACGCTTCGCCGGTGCGCCTTGTGACGTTGGGTGAAAAGGAAAAAGGCAT GGGAAGTAGCGAGAAGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MDVQQALGHRPGLRSAPGGSRAQAVVQNLIKGTRMSNGGGAATNTGIDYQQRLAAYFLIQMLLDIETLSGIGLDGVHAIT EVSFESSSYVDDMVVKTTTGNLYVQAKRNISMSDSSDSEFMKTVHQFVNQFLQDPSGGHKFVLATSSGSSSKIKQELRKI LESIRLNDTGFKDNPLNKSEEDVYTKVKNCISTSYLEITNNNIADTTISDILSKTYVAIADVQQGMPLEGAILTILTSKS RVKPELFFSATISLALSLASARQSINKSGLESKLGNYIGTLTPEKKHAVEQDFFKIEMSPGKISSGREVLLVESFIDGQD FLVVELIRFDDSGSKKVKFHDNLCELLNGSTWNVLSRASTYSGIERYIEERADEFKDKNIGFLPINTEEDIENSPFALAY GDYCEDIRKGNDQPLRCLHCGDSISENGAPLVEIDEIGAEHALGLVHKKCLSPLDRVLGGIKAEVFDEYDYLKDFDYKTW FEFIQTGQAMFGSLEGKLNQIMFMGWNPEGHGEFKGNYCVKINLEDGSSKYVHHRSKVVRETLESATKRADFFNMQFEKA RIKGDPSCYTSNNETFSSYSVAIKMKDEDEECIECIDAEAVKYTLAIEKAYDRFTNYYAPLFILLDLETSQPIIIENAIF ILNNPLKLKTYLSNWSKAGIELPEYKIEILKTDHEFDLFLSRYLKKGIQIVANPLFDMVLNPLSGLVFRHIDEILEEKAK R
Sequences:
>Translated_721_residues MDVQQALGHRPGLRSAPGGSRAQAVVQNLIKGTRMSNGGGAATNTGIDYQQRLAAYFLIQMLLDIETLSGIGLDGVHAIT EVSFESSSYVDDMVVKTTTGNLYVQAKRNISMSDSSDSEFMKTVHQFVNQFLQDPSGGHKFVLATSSGSSSKIKQELRKI LESIRLNDTGFKDNPLNKSEEDVYTKVKNCISTSYLEITNNNIADTTISDILSKTYVAIADVQQGMPLEGAILTILTSKS RVKPELFFSATISLALSLASARQSINKSGLESKLGNYIGTLTPEKKHAVEQDFFKIEMSPGKISSGREVLLVESFIDGQD FLVVELIRFDDSGSKKVKFHDNLCELLNGSTWNVLSRASTYSGIERYIEERADEFKDKNIGFLPINTEEDIENSPFALAY GDYCEDIRKGNDQPLRCLHCGDSISENGAPLVEIDEIGAEHALGLVHKKCLSPLDRVLGGIKAEVFDEYDYLKDFDYKTW FEFIQTGQAMFGSLEGKLNQIMFMGWNPEGHGEFKGNYCVKINLEDGSSKYVHHRSKVVRETLESATKRADFFNMQFEKA RIKGDPSCYTSNNETFSSYSVAIKMKDEDEECIECIDAEAVKYTLAIEKAYDRFTNYYAPLFILLDLETSQPIIIENAIF ILNNPLKLKTYLSNWSKAGIELPEYKIEILKTDHEFDLFLSRYLKKGIQIVANPLFDMVLNPLSGLVFRHIDEILEEKAK R >Mature_721_residues MDVQQALGHRPGLRSAPGGSRAQAVVQNLIKGTRMSNGGGAATNTGIDYQQRLAAYFLIQMLLDIETLSGIGLDGVHAIT EVSFESSSYVDDMVVKTTTGNLYVQAKRNISMSDSSDSEFMKTVHQFVNQFLQDPSGGHKFVLATSSGSSSKIKQELRKI LESIRLNDTGFKDNPLNKSEEDVYTKVKNCISTSYLEITNNNIADTTISDILSKTYVAIADVQQGMPLEGAILTILTSKS RVKPELFFSATISLALSLASARQSINKSGLESKLGNYIGTLTPEKKHAVEQDFFKIEMSPGKISSGREVLLVESFIDGQD FLVVELIRFDDSGSKKVKFHDNLCELLNGSTWNVLSRASTYSGIERYIEERADEFKDKNIGFLPINTEEDIENSPFALAY GDYCEDIRKGNDQPLRCLHCGDSISENGAPLVEIDEIGAEHALGLVHKKCLSPLDRVLGGIKAEVFDEYDYLKDFDYKTW FEFIQTGQAMFGSLEGKLNQIMFMGWNPEGHGEFKGNYCVKINLEDGSSKYVHHRSKVVRETLESATKRADFFNMQFEKA RIKGDPSCYTSNNETFSSYSVAIKMKDEDEECIECIDAEAVKYTLAIEKAYDRFTNYYAPLFILLDLETSQPIIIENAIF ILNNPLKLKTYLSNWSKAGIELPEYKIEILKTDHEFDLFLSRYLKKGIQIVANPLFDMVLNPLSGLVFRHIDEILEEKAK R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80769; Mature: 80769
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQQALGHRPGLRSAPGGSRAQAVVQNLIKGTRMSNGGGAATNTGIDYQQRLAAYFLIQ CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH MLLDIETLSGIGLDGVHAITEVSFESSSYVDDMVVKTTTGNLYVQAKRNISMSDSSDSEF HHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHH MKTVHQFVNQFLQDPSGGHKFVLATSSGSSSKIKQELRKILESIRLNDTGFKDNPLNKSE HHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH EDVYTKVKNCISTSYLEITNNNIADTTISDILSKTYVAIADVQQGMPLEGAILTILTSKS HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC RVKPELFFSATISLALSLASARQSINKSGLESKLGNYIGTLTPEKKHAVEQDFFKIEMSP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEECC GKISSGREVLLVESFIDGQDFLVVELIRFDDSGSKKVKFHDNLCELLNGSTWNVLSRAST CCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEHHHHHHHHCCCCHHHHHHHHH YSGIERYIEERADEFKDKNIGFLPINTEEDIENSPFALAYGDYCEDIRKGNDQPLRCLHC HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEECHHHHHHHCCCCCCEEEEEC GDSISENGAPLVEIDEIGAEHALGLVHKKCLSPLDRVLGGIKAEVFDEYDYLKDFDYKTW CCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH FEFIQTGQAMFGSLEGKLNQIMFMGWNPEGHGEFKGNYCVKINLEDGSSKYVHHRSKVVR HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH ETLESATKRADFFNMQFEKARIKGDPSCYTSNNETFSSYSVAIKMKDEDEECIECIDAEA HHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCCCEEEEEEEEEECCCHHHHHHHHCCHH VKYTLAIEKAYDRFTNYYAPLFILLDLETSQPIIIENAIFILNNPLKLKTYLSNWSKAGI HEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECEEEEECCCEEHHHHHCCHHHCCC ELPEYKIEILKTDHEFDLFLSRYLKKGIQIVANPLFDMVLNPLSGLVFRHIDEILEEKAK CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC R C >Mature Secondary Structure MDVQQALGHRPGLRSAPGGSRAQAVVQNLIKGTRMSNGGGAATNTGIDYQQRLAAYFLIQ CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH MLLDIETLSGIGLDGVHAITEVSFESSSYVDDMVVKTTTGNLYVQAKRNISMSDSSDSEF HHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHH MKTVHQFVNQFLQDPSGGHKFVLATSSGSSSKIKQELRKILESIRLNDTGFKDNPLNKSE HHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH EDVYTKVKNCISTSYLEITNNNIADTTISDILSKTYVAIADVQQGMPLEGAILTILTSKS HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC RVKPELFFSATISLALSLASARQSINKSGLESKLGNYIGTLTPEKKHAVEQDFFKIEMSP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEECC GKISSGREVLLVESFIDGQDFLVVELIRFDDSGSKKVKFHDNLCELLNGSTWNVLSRAST CCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEHHHHHHHHCCCCHHHHHHHHH YSGIERYIEERADEFKDKNIGFLPINTEEDIENSPFALAYGDYCEDIRKGNDQPLRCLHC HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEECHHHHHHHCCCCCCEEEEEC GDSISENGAPLVEIDEIGAEHALGLVHKKCLSPLDRVLGGIKAEVFDEYDYLKDFDYKTW CCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH FEFIQTGQAMFGSLEGKLNQIMFMGWNPEGHGEFKGNYCVKINLEDGSSKYVHHRSKVVR HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH ETLESATKRADFFNMQFEKARIKGDPSCYTSNNETFSSYSVAIKMKDEDEECIECIDAEA HHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCCCEEEEEEEEEECCCHHHHHHHHCCHH VKYTLAIEKAYDRFTNYYAPLFILLDLETSQPIIIENAIFILNNPLKLKTYLSNWSKAGI HEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECEEEEECCCEEHHHHHCCHHHCCC ELPEYKIEILKTDHEFDLFLSRYLKKGIQIVANPLFDMVLNPLSGLVFRHIDEILEEKAK CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA