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The map label for this gene is 78223957

Identifier: 78223957

GI number: 78223957

Start: 3118372

End: 3119592

Strand: Reverse

Name: 78223957

Synonym: Gmet_2761

Alternate gene names: NA

Gene position: 3119592-3118372 (Counterclockwise)

Preceding gene: 78223958

Following gene: 78223956

Centisome position: 78.04

GC content: 64.86

Gene sequence:

>1221_bases
ATGAAGCATGGCGGTCCGATACGGGGGGCGATCCTGCTCTTCGCTTTGTTTCTGGGAGCCGGGTCGGTCTTCGTGCGCCA
GGTGGAAGAAGGGCGTTGCCGCGAGCAGCGCCGGAACGTGGCCCAGCTCGCCGCGGGTGCCGCCTTTTCGCTGGAGCGCC
AGATATCCGGCTCCCTCTCCGCCACCTACGCCCTTGCCGCCATTCTGCGCCAGGCCGGCACCATTAAGGACTTTGATGCC
CTCGCTGCCGAGATGATCCGGACCTACGGCGGTATCAGCAGCCTGCAACTCGCCCCGGCCGGGGTCATGACCACCATCTA
CCCCCTTGCCGGCAACGAAAAGGCCATAGGCCACGACCTCCTCAGCGACCCCCTCCGTCGCACCGAGGCGCAACGGGCGA
TCGAGAGCCGGCAGATGACCCTTGCCGGCCCCTTCGAGCTGAGGCAAGGGGGGGTAGGAGCCGTTGGCAGGCTGGCGGTT
TTTCTCCCCGAACCGGGCAGGGGGGAGCGTTTCTGGGGCTTCGTCAATGTCTTGATGCGCCTCCGGGACCTCCTCGCCGC
AAGCAATCTGGAAGCTCTCGATAAGGGGGGGTACGGGTATGAGCTCACCAGGCTCAACCCGGACACGGGCCGGTGGGAAT
CCATTGCCCGCTCTGACGGACCGCTCCAGGCGCCGGTGGAAAGCACCATCGACGTCCCCAACGGCACCTGGAAGCTGGCC
GTGGCGCCGAAACAGGGGTGGCAGACTTCCCCGTTCCTTTACGTGGAATACCTCATGGTTGGCGGCATCAGCGGCATCCT
GGCGCTTCTCGCCTATCTCATGCTGAGACAACCGGAAAAGCTCCGCCACGAGGTCCTCCTGCGGACGGCGGACCTGGAGA
AGGCCAACCGGCAGCTGGAGGCGCAAATCCGGGAGCGGCAGCGTGCCGAGGACGAGTTGCGCCGCCTCAATGCCGACCTT
GAACTGCGGGTCACCGAGCGGACGGTGCAGCTCGAGAACTCCAACCGGGAACTGGAGTCCTTCAGCTATTCGGTCTCCCA
TGACCTGCGGGCCCCCCTGCGGCATATGGAGAGTTTCAGCCGCATCCTTGCGGAAGATCATGCCGGGCAGATCGGCGAAG
GGGGGGAGCAGTGCCTGGAGCGAATCGTGGCGGAAATCCAGCGCATGAAACTCCACATCGACAGCCTGCTGGAGCAGGCC
CAGGTTGAAAGAATACGCTGA

Upstream 100 bases:

>100_bases
CCGTCACGGGGGGCGGATTTGGGCGGAGGGGGCGGTCGGCCGTGGAGCCACCTTCTTCTTTACCCTGGGCGAGGAGTAGT
GGCATGGGGAGGATTCGGCC

Downstream 100 bases:

>100_bases
ACTCACCGAGTTTGCCCCCAAGGGCGGGCACTACCCGCCCGGATAGCGAGGTCCCCATGGAATCGAAACTCCGCGCCCTT
CTCCCCGACGCCGAACTTAT

Product: putative periplasmic ligand-binding sensor protein

Products: NA

Alternate protein names: PAS/PAC Sensor Signal Transduction Histidine Kinase; Histidine Kinase; Sensory Box Histidine Kinase; Sensor Histidine Kinase; Diguanylate Cyclase; Multi-Sensor Hybrid Histidine Kinase; GGDEF Family Protein; Signal Transduction Histidine Kinase; Two-Component System Sensor Protein; Two-Component Hybrid Sensor And Regulator; Diguanylate Cyclase/Phosphodiesterase; Sensor Protein; PAS Fold Family; PAS/PAC Sensor Hybrid Histidine Kinase; Sensory Box/GGDEF Family Protein; Ggdef Family Protein; GAF Sensor Signal Transduction Histidine Kinase; Two Component Sensor Histidine Kinase; Multi-Sensor Signal Transduction Multi-Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Signal Transduction Protein; Periplasmic Sensor Hybrid Histidine Kinase; PAS Domain-Containing Sensor Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase With Chase Sensor; Sensory Box Sensor Histidine Kinase; GGDEF Domain-Containing Protein; Sensor Histidine Kinase/Response Regulator Fusion Protein; PAS Sensor Protein; Cache Sensor Signal Transduction Histidine Kinase; Two Component Sensor; Diguanylate Cyclase With PAS/PAC Sensor; Sensory Transduction Protein Kinase; Response Receiver Histidine Kinase; PAS/PAC Domain-Containing Sensor Histidine Kinase; Pas Sensor Protein; Signal Protein; Two-Component System Sensor Kinase; Sensory Box Protein; Bacteriophytochrome; Bacteriophytochrome-Like Protein; ATPase Domain-Containing Protein; Stage II Sporulation Protein E; Histidine Kinase Sensor Protein; PAS/PAC/GGDEF-Domain-Containing Protein; Sensor Histidine Kinase Lipoprotein; Two-Component System Sensor Histidine Kinase; ATPase Histidine Kinase- DNA Gyrase B- And; Histidine Kinase Hybrid; Bacteriophytochrome Histidine Kinase

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKHGGPIRGAILLFALFLGAGSVFVRQVEEGRCREQRRNVAQLAAGAAFSLERQISGSLSATYALAAILRQAGTIKDFDA
LAAEMIRTYGGISSLQLAPAGVMTTIYPLAGNEKAIGHDLLSDPLRRTEAQRAIESRQMTLAGPFELRQGGVGAVGRLAV
FLPEPGRGERFWGFVNVLMRLRDLLAASNLEALDKGGYGYELTRLNPDTGRWESIARSDGPLQAPVESTIDVPNGTWKLA
VAPKQGWQTSPFLYVEYLMVGGISGILALLAYLMLRQPEKLRHEVLLRTADLEKANRQLEAQIRERQRAEDELRRLNADL
ELRVTERTVQLENSNRELESFSYSVSHDLRAPLRHMESFSRILAEDHAGQIGEGGEQCLERIVAEIQRMKLHIDSLLEQA
QVERIR

Sequences:

>Translated_406_residues
MKHGGPIRGAILLFALFLGAGSVFVRQVEEGRCREQRRNVAQLAAGAAFSLERQISGSLSATYALAAILRQAGTIKDFDA
LAAEMIRTYGGISSLQLAPAGVMTTIYPLAGNEKAIGHDLLSDPLRRTEAQRAIESRQMTLAGPFELRQGGVGAVGRLAV
FLPEPGRGERFWGFVNVLMRLRDLLAASNLEALDKGGYGYELTRLNPDTGRWESIARSDGPLQAPVESTIDVPNGTWKLA
VAPKQGWQTSPFLYVEYLMVGGISGILALLAYLMLRQPEKLRHEVLLRTADLEKANRQLEAQIRERQRAEDELRRLNADL
ELRVTERTVQLENSNRELESFSYSVSHDLRAPLRHMESFSRILAEDHAGQIGEGGEQCLERIVAEIQRMKLHIDSLLEQA
QVERIR
>Mature_406_residues
MKHGGPIRGAILLFALFLGAGSVFVRQVEEGRCREQRRNVAQLAAGAAFSLERQISGSLSATYALAAILRQAGTIKDFDA
LAAEMIRTYGGISSLQLAPAGVMTTIYPLAGNEKAIGHDLLSDPLRRTEAQRAIESRQMTLAGPFELRQGGVGAVGRLAV
FLPEPGRGERFWGFVNVLMRLRDLLAASNLEALDKGGYGYELTRLNPDTGRWESIARSDGPLQAPVESTIDVPNGTWKLA
VAPKQGWQTSPFLYVEYLMVGGISGILALLAYLMLRQPEKLRHEVLLRTADLEKANRQLEAQIRERQRAEDELRRLNADL
ELRVTERTVQLENSNRELESFSYSVSHDLRAPLRHMESFSRILAEDHAGQIGEGGEQCLERIVAEIQRMKLHIDSLLEQA
QVERIR

Specific function: Unknown

COG id: COG3452

COG function: function code T; Predicted periplasmic ligand-binding sensor domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45076; Mature: 45076

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS50839 CHASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHGGPIRGAILLFALFLGAGSVFVRQVEEGRCREQRRNVAQLAAGAAFSLERQISGSLS
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHH
ATYALAAILRQAGTIKDFDALAAEMIRTYGGISSLQLAPAGVMTTIYPLAGNEKAIGHDL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCHHHHHH
LSDPLRRTEAQRAIESRQMTLAGPFELRQGGVGAVGRLAVFLPEPGRGERFWGFVNVLMR
HHHHHHHHHHHHHHHHCCCEEECCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
LRDLLAASNLEALDKGGYGYELTRLNPDTGRWESIARSDGPLQAPVESTIDVPNGTWKLA
HHHHHHHCCCHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCHHCCCCCCCCEEEE
VAPKQGWQTSPFLYVEYLMVGGISGILALLAYLMLRQPEKLRHEVLLRTADLEKANRQLE
ECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AQIRERQRAEDELRRLNADLELRVTERTVQLENSNRELESFSYSVSHDLRAPLRHMESFS
HHHHHHHHHHHHHHHHCCCEEEEEEEHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RILAEDHAGQIGEGGEQCLERIVAEIQRMKLHIDSLLEQAQVERIR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHGGPIRGAILLFALFLGAGSVFVRQVEEGRCREQRRNVAQLAAGAAFSLERQISGSLS
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHH
ATYALAAILRQAGTIKDFDALAAEMIRTYGGISSLQLAPAGVMTTIYPLAGNEKAIGHDL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCHHHHHH
LSDPLRRTEAQRAIESRQMTLAGPFELRQGGVGAVGRLAVFLPEPGRGERFWGFVNVLMR
HHHHHHHHHHHHHHHHCCCEEECCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
LRDLLAASNLEALDKGGYGYELTRLNPDTGRWESIARSDGPLQAPVESTIDVPNGTWKLA
HHHHHHHCCCHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCHHCCCCCCCCEEEE
VAPKQGWQTSPFLYVEYLMVGGISGILALLAYLMLRQPEKLRHEVLLRTADLEKANRQLE
ECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AQIRERQRAEDELRRLNADLELRVTERTVQLENSNRELESFSYSVSHDLRAPLRHMESFS
HHHHHHHHHHHHHHHHCCCEEEEEEEHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RILAEDHAGQIGEGGEQCLERIVAEIQRMKLHIDSLLEQAQVERIR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA