Click here to switch to the map view.

The map label for this gene is yidB [H]

Identifier: 78223940

GI number: 78223940

Start: 3102892

End: 3103299

Strand: Reverse

Name: yidB [H]

Synonym: Gmet_2744

Alternate gene names: 78223940

Gene position: 3103299-3102892 (Counterclockwise)

Preceding gene: 78223941

Following gene: 78223937

Centisome position: 77.63

GC content: 62.99

Gene sequence:

>408_bases
ATGGGACTGCTTGACGAGTTGGTTAGCAAGGCGACGGGAATGCTGGGCGGCGGTCAGGGAGAGGGACAGGAGGGGTTGCT
CGGCGGTGTGATGGAGATGCTCGGCGGCCAGGGGGGACTGGGCAACCTTGTCCAGAACTTCAAGGACAAGGGGCTCGGTG
ACATCATCTCCTCGTGGGTCAGTACGGGTCAGAACCTCCCCATCAACGCCGACCAGATCAAGGAAGGGCTCGGGAGCGAG
ACCATCCAGAACCTGGCCGCCAAAGTGGGGATCTCTCCGGACGACCTGAGCTCGAAGCTCTCCGAGCTCCTTCCCGGCGT
CGTCGACAAGCTCACCCCCGACGGGCAAATCCCCGAAGGGGGGCTCCTGGAGAAGGGGTTGGAGTTCCTGAAGGGGAAGC
TTGGGTAG

Upstream 100 bases:

>100_bases
GGCCATCAAGGCGGGCTACCGGGCGCCCAAGCAGGGTGGCAAGGAACAATAACCCGATCGAGGCTTTGGATTTCTCCATC
ACGGACAGAGGAGGATTATC

Downstream 100 bases:

>100_bases
GGTAAACATCACTGAGGTTGGAACGGAAAGGGGGGGACGATGCGGTGCATCGTCCCCCCTTTTTGTGCATGGCGCACTCC
GTTTCACGGAAGGGATGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MGLLDELVSKATGMLGGGQGEGQEGLLGGVMEMLGGQGGLGNLVQNFKDKGLGDIISSWVSTGQNLPINADQIKEGLGSE
TIQNLAAKVGISPDDLSSKLSELLPGVVDKLTPDGQIPEGGLLEKGLEFLKGKLG

Sequences:

>Translated_135_residues
MGLLDELVSKATGMLGGGQGEGQEGLLGGVMEMLGGQGGLGNLVQNFKDKGLGDIISSWVSTGQNLPINADQIKEGLGSE
TIQNLAAKVGISPDDLSSKLSELLPGVVDKLTPDGQIPEGGLLEKGLEFLKGKLG
>Mature_134_residues
GLLDELVSKATGMLGGGQGEGQEGLLGGVMEMLGGQGGLGNLVQNFKDKGLGDIISSWVSTGQNLPINADQIKEGLGSET
IQNLAAKVGISPDDLSSKLSELLPGVVDKLTPDGQIPEGGLLEKGLEFLKGKLG

Specific function: Unknown

COG id: COG3753

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082321, Length=138, Percent_Identity=34.7826086956522, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009282 [H]

Pfam domain/function: PF06078 DUF937 [H]

EC number: NA

Molecular weight: Translated: 13757; Mature: 13626

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLDELVSKATGMLGGGQGEGQEGLLGGVMEMLGGQGGLGNLVQNFKDKGLGDIISSWV
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH
STGQNLPINADQIKEGLGSETIQNLAAKVGISPDDLSSKLSELLPGVVDKLTPDGQIPEG
HCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GLLEKGLEFLKGKLG
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
GLLDELVSKATGMLGGGQGEGQEGLLGGVMEMLGGQGGLGNLVQNFKDKGLGDIISSWV
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH
STGQNLPINADQIKEGLGSETIQNLAAKVGISPDDLSSKLSELLPGVVDKLTPDGQIPEG
HCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GLLEKGLEFLKGKLG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3029692; 7686882; 9278503 [H]