| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223910
Identifier: 78223910
GI number: 78223910
Start: 3065755
End: 3066711
Strand: Direct
Name: 78223910
Synonym: Gmet_2714
Alternate gene names: NA
Gene position: 3065755-3066711 (Clockwise)
Preceding gene: 78223908
Following gene: 78223915
Centisome position: 76.69
GC content: 60.92
Gene sequence:
>957_bases ATGAAAAGCCGTTTCTACAGACCCCTTTCCCTCGCATCCGTCTCACCCTCCTACTTCCCGGAAATCGCCCTCTACGTCAG GAACAGCGGCAATTACATCCTGTACAAGAACCATGACCGGCAGTTCACGGAGGAGGACCGGCACCGGCTCGAACGGACCA ACACCTCATTCCTCTACGTGAGAAGCGGCGACATGGACGCGGTGACCGAATACCTTGAACAGAACCTGGACACCCTCCTG GCGCGGGACGACATCGACAGCAACGCCAAGGGGACCATCCTCTACCAGACCGCCGCCAACTACGTCACTGACGTCTTTGA TGAACCGGGCAAGACCGCGGATATCATCCGCTGCCGGAGCCTGATCCGCCACCTCATGAAGTACGTGGCGGGGCACGAAG ACGCCCTGAAGGCGCTCCAGGCCATCACGTCCCAGAACTACTACATCTTCACCCACAGCGTCCAGGTGGCCGCCCTGATG ATGCTGGTCCACGACCGGCTTTTCCGCTTGAACCAGGACGAAATGATTGACGTGGGGATCGGCTCCCTCCTCCACGACGT GGGAATGGTCTTCTTGTCCGGCCAACTCCTCGACAAACCGGACGCCCTGGCCGCTATCGAGTACCACAAGGCGAAGCAGC ATGCCCAGAAGGGATACGAGCATCTGCAAAGCGCCGGCACCCTGAGCGAGGTTTCGCTGACCATCGTGCGGCACCATCAC GAAAAATACGACGGGAGCGGCTACCCCGCCGGCCTCAAGGGGGACGACATCCCCCGCAGCGCCCAACTGGCGGCCCTCTG CGACACCTACTGCGCCATGACCACCGACCGTCCCAAGCACACCGCCCTCCCCGGCGCGGAAGCCCTCCGGATCATGGAAG ACGAGGTGGGAGGCGCTTTCAGCCCGGATTTGTTCTATCGTTTTGCGGACGTGGTCAAAGGGAAAGGTAAAGCCTGA
Upstream 100 bases:
>100_bases TTCAGCCGGTTGCGCGACACTCTCATTAATCAATGAAACCCTTGACAAATCAACATACTGTGCGTTTCAATAGCCCCATG AATATATCAGGGACCCTTCC
Downstream 100 bases:
>100_bases GGGAATCCTCCGAGACTGCCACACGCGACAGCACCATGACTCTCCAAAACTTAAAGGCCCGCACTTGGCGGGCCTTTTTG CGTTGTCTGTTCACATCTTA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKSRFYRPLSLASVSPSYFPEIALYVRNSGNYILYKNHDRQFTEEDRHRLERTNTSFLYVRSGDMDAVTEYLEQNLDTLL ARDDIDSNAKGTILYQTAANYVTDVFDEPGKTADIIRCRSLIRHLMKYVAGHEDALKALQAITSQNYYIFTHSVQVAALM MLVHDRLFRLNQDEMIDVGIGSLLHDVGMVFLSGQLLDKPDALAAIEYHKAKQHAQKGYEHLQSAGTLSEVSLTIVRHHH EKYDGSGYPAGLKGDDIPRSAQLAALCDTYCAMTTDRPKHTALPGAEALRIMEDEVGGAFSPDLFYRFADVVKGKGKA
Sequences:
>Translated_318_residues MKSRFYRPLSLASVSPSYFPEIALYVRNSGNYILYKNHDRQFTEEDRHRLERTNTSFLYVRSGDMDAVTEYLEQNLDTLL ARDDIDSNAKGTILYQTAANYVTDVFDEPGKTADIIRCRSLIRHLMKYVAGHEDALKALQAITSQNYYIFTHSVQVAALM MLVHDRLFRLNQDEMIDVGIGSLLHDVGMVFLSGQLLDKPDALAAIEYHKAKQHAQKGYEHLQSAGTLSEVSLTIVRHHH EKYDGSGYPAGLKGDDIPRSAQLAALCDTYCAMTTDRPKHTALPGAEALRIMEDEVGGAFSPDLFYRFADVVKGKGKA >Mature_318_residues MKSRFYRPLSLASVSPSYFPEIALYVRNSGNYILYKNHDRQFTEEDRHRLERTNTSFLYVRSGDMDAVTEYLEQNLDTLL ARDDIDSNAKGTILYQTAANYVTDVFDEPGKTADIIRCRSLIRHLMKYVAGHEDALKALQAITSQNYYIFTHSVQVAALM MLVHDRLFRLNQDEMIDVGIGSLLHDVGMVFLSGQLLDKPDALAAIEYHKAKQHAQKGYEHLQSAGTLSEVSLTIVRHHH EKYDGSGYPAGLKGDDIPRSAQLAALCDTYCAMTTDRPKHTALPGAEALRIMEDEVGGAFSPDLFYRFADVVKGKGKA
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35731; Mature: 35731
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRFYRPLSLASVSPSYFPEIALYVRNSGNYILYKNHDRQFTEEDRHRLERTNTSFLYV CCCCCCCCCHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEE RSGDMDAVTEYLEQNLDTLLARDDIDSNAKGTILYQTAANYVTDVFDEPGKTADIIRCRS ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCHHHHHHHHH LIRHLMKYVAGHEDALKALQAITSQNYYIFTHSVQVAALMMLVHDRLFRLNQDEMIDVGI HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEHHHH GSLLHDVGMVFLSGQLLDKPDALAAIEYHKAKQHAQKGYEHLQSAGTLSEVSLTIVRHHH HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EKYDGSGYPAGLKGDDIPRSAQLAALCDTYCAMTTDRPKHTALPGAEALRIMEDEVGGAF HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC SPDLFYRFADVVKGKGKA CHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKSRFYRPLSLASVSPSYFPEIALYVRNSGNYILYKNHDRQFTEEDRHRLERTNTSFLYV CCCCCCCCCHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEE RSGDMDAVTEYLEQNLDTLLARDDIDSNAKGTILYQTAANYVTDVFDEPGKTADIIRCRS ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCHHHHHHHHH LIRHLMKYVAGHEDALKALQAITSQNYYIFTHSVQVAALMMLVHDRLFRLNQDEMIDVGI HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEHHHH GSLLHDVGMVFLSGQLLDKPDALAAIEYHKAKQHAQKGYEHLQSAGTLSEVSLTIVRHHH HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EKYDGSGYPAGLKGDDIPRSAQLAALCDTYCAMTTDRPKHTALPGAEALRIMEDEVGGAF HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC SPDLFYRFADVVKGKGKA CHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]