| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is cheB4
Identifier: 78223907
GI number: 78223907
Start: 3061837
End: 3062880
Strand: Direct
Name: cheB4
Synonym: Gmet_2711
Alternate gene names: 78223907
Gene position: 3061837-3062880 (Clockwise)
Preceding gene: 78223906
Following gene: 78223908
Centisome position: 76.6
GC content: 65.71
Gene sequence:
>1044_bases ATGGTGAAGGTTCTCATTGTGGACGACTCGGCGAGCGTGCGGCTGTTCCTTCAGGGGCTGCTCGCCGCCGACCCGGGGAT AGAGGTGATCGGCACCGCGGCGGACGGGGATGAAGCTGTCGAAGCGGTGGCGCGGCTGAATCCCGACGTGGTAACCATGG ACATCTACATGCCGCGGATGAACGGCCTGCTCGCCACCCGCCGGATCATGGAAACCCACCCGGTCCCCATCGTCGTGGTG AGCGGAAACCTTGACGCCGAGGAAGTCGCCTCGACCTTCCGTGCCATAGAGGCGGGGGCCGTCACCGCCCTGCCGCGCCC CCAGGGCCCCGGCCATCCGAACCACGAGCGGGAAGCCAGGTCCTTCGTCCAGGCCGTGAAGCTGATGGCTGAAGTCAAGG TGATAAAGCGGTGGCCCCGACGCGACAACCCGGCCTCCCTCCCTTCTTTGCCATGCCAGGCGATGGTTCCGGCGCGGCTC AAGGCGGTAGCCATCGGCGCTTCGACCGGCGGGCCCATGGTTCTCCAGACCATTCTTGCCGGTCTGCGAAGGGATTTCCC GCTGCCGGTCCTCATCGTCCAGCACATGGCCACGGGCTTCATCAAGGGATTTGTCGAGTGGCTCAACCTCACCTCGGCCC TGCCGGTGCACATTGCCGGCAACGGCGACCGACTCATCCCCGGCCACGCCTACGTGGCGCCGGACTGTTTTCACATGCTC GTGACCGAAGACGGAACTGCAATCGAGTTGCAGAACACCCCCCCGGAAAACGGCCTCCGACCATCGGTCTCTGCCCTCTT CCGCTCCGTGACGCAGGCTTTTGGCGCCCAGACGGTCGGTGTGCTCCTCACCGGCATGGGAAGCGACGGCGCCAGGGAAC TGAAGCGCTTACGCGAGGCCGGAGCCGTCACCATCGTGCAGGACCGGGAAAGCTCCGTCATTCACGGAATGCCGGGCGAG GCCCTGAAACTGGGGGCAGCGACCCACACGCTCCCTCCCGACCGGATCGTGACCGCCCTTACCAGCCTGGCTATGGAGAA GTGA
Upstream 100 bases:
>100_bases TGCCGGGGCAAACGCCTATATCGTGAAGAGCAGTTTCGACCAGAGCAATCTGCTGGATGCCATACGGAGGCTGATTTGAG CTGTGGAGTAAGAGGCTGAG
Downstream 100 bases:
>100_bases CATGGGAGCAACCACGGAACAAAGCAACGGCAACATCCTCATCATCGAAGACAGCCCCACCCAGTCAGCACAACTTCGCC ACATCATGGAAACGAACGGC
Product: response regulator receiver (CheY-like) modulated CheB methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MVKVLIVDDSASVRLFLQGLLAADPGIEVIGTAADGDEAVEAVARLNPDVVTMDIYMPRMNGLLATRRIMETHPVPIVVV SGNLDAEEVASTFRAIEAGAVTALPRPQGPGHPNHEREARSFVQAVKLMAEVKVIKRWPRRDNPASLPSLPCQAMVPARL KAVAIGASTGGPMVLQTILAGLRRDFPLPVLIVQHMATGFIKGFVEWLNLTSALPVHIAGNGDRLIPGHAYVAPDCFHML VTEDGTAIELQNTPPENGLRPSVSALFRSVTQAFGAQTVGVLLTGMGSDGARELKRLREAGAVTIVQDRESSVIHGMPGE ALKLGAATHTLPPDRIVTALTSLAMEK
Sequences:
>Translated_347_residues MVKVLIVDDSASVRLFLQGLLAADPGIEVIGTAADGDEAVEAVARLNPDVVTMDIYMPRMNGLLATRRIMETHPVPIVVV SGNLDAEEVASTFRAIEAGAVTALPRPQGPGHPNHEREARSFVQAVKLMAEVKVIKRWPRRDNPASLPSLPCQAMVPARL KAVAIGASTGGPMVLQTILAGLRRDFPLPVLIVQHMATGFIKGFVEWLNLTSALPVHIAGNGDRLIPGHAYVAPDCFHML VTEDGTAIELQNTPPENGLRPSVSALFRSVTQAFGAQTVGVLLTGMGSDGARELKRLREAGAVTIVQDRESSVIHGMPGE ALKLGAATHTLPPDRIVTALTSLAMEK >Mature_347_residues MVKVLIVDDSASVRLFLQGLLAADPGIEVIGTAADGDEAVEAVARLNPDVVTMDIYMPRMNGLLATRRIMETHPVPIVVV SGNLDAEEVASTFRAIEAGAVTALPRPQGPGHPNHEREARSFVQAVKLMAEVKVIKRWPRRDNPASLPSLPCQAMVPARL KAVAIGASTGGPMVLQTILAGLRRDFPLPVLIVQHMATGFIKGFVEWLNLTSALPVHIAGNGDRLIPGHAYVAPDCFHML VTEDGTAIELQNTPPENGLRPSVSALFRSVTQAFGAQTVGVLLTGMGSDGARELKRLREAGAVTIVQDRESSVIHGMPGE ALKLGAATHTLPPDRIVTALTSLAMEK
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
Organism=Escherichia coli, GI1788192, Length=326, Percent_Identity=36.5030674846626, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI1790299, Length=105, Percent_Identity=35.2380952380952, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHEB4_GEOMG (Q39S45)
Other databases:
- EMBL: CP000148 - RefSeq: YP_385654.1 - ProteinModelPortal: Q39S45 - STRING: Q39S45 - GeneID: 3740018 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_2711 - NMPDR: fig|269799.3.peg.3225 - eggNOG: COG2201 - HOGENOM: HBG705324 - OMA: GPGHPNH - PhylomeDB: Q39S45 - ProtClustDB: CLSK755255 - BioCyc: GMET269799:GMET_2711-MONOMER - GO: GO:0005737 - GO: GO:0006935 - HAMAP: MF_00099 - InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 - Gene3D: G3DSA:3.40.50.180 - PIRSF: PIRSF000876 - SMART: SM00448
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg; SSF52738 Chemotax_RR_pGlu_Me-esterase; SSF52172 CheY_like
EC number: =3.1.1.61
Molecular weight: Translated: 36897; Mature: 36897
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50122 CHEB; PS50110 RESPONSE_REGULATORY
Important sites: ACT_SITE 168-168 ACT_SITE 195-195 ACT_SITE 289-289
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKVLIVDDSASVRLFLQGLLAADPGIEVIGTAADGDEAVEAVARLNPDVVTMDIYMPRM CEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCH NGLLATRRIMETHPVPIVVVSGNLDAEEVASTFRAIEAGAVTALPRPQGPGHPNHEREAR HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHH SFVQAVKLMAEVKVIKRWPRRDNPASLPSLPCQAMVPARLKAVAIGASTGGPMVLQTILA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHH GLRRDFPLPVLIVQHMATGFIKGFVEWLNLTSALPVHIAGNGDRLIPGHAYVAPDCFHML HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCCEECCHHEEEE VTEDGTAIELQNTPPENGLRPSVSALFRSVTQAFGAQTVGVLLTGMGSDGARELKRLREA EECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHEEECCCCCHHHHHHHHHHC GAVTIVQDRESSVIHGMPGEALKLGAATHTLPPDRIVTALTSLAMEK CCEEEEECCCCCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVKVLIVDDSASVRLFLQGLLAADPGIEVIGTAADGDEAVEAVARLNPDVVTMDIYMPRM CEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCH NGLLATRRIMETHPVPIVVVSGNLDAEEVASTFRAIEAGAVTALPRPQGPGHPNHEREAR HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHH SFVQAVKLMAEVKVIKRWPRRDNPASLPSLPCQAMVPARLKAVAIGASTGGPMVLQTILA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHH GLRRDFPLPVLIVQHMATGFIKGFVEWLNLTSALPVHIAGNGDRLIPGHAYVAPDCFHML HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCCEECCHHEEEE VTEDGTAIELQNTPPENGLRPSVSALFRSVTQAFGAQTVGVLLTGMGSDGARELKRLREA EECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHEEECCCCCHHHHHHHHHHC GAVTIVQDRESSVIHGMPGEALKLGAATHTLPPDRIVTALTSLAMEK CCEEEEECCCCCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA