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The map label for this gene is 78223884

Identifier: 78223884

GI number: 78223884

Start: 3034650

End: 3035192

Strand: Direct

Name: 78223884

Synonym: Gmet_2688

Alternate gene names: NA

Gene position: 3034650-3035192 (Clockwise)

Preceding gene: 78223868

Following gene: 78223889

Centisome position: 75.92

GC content: 51.2

Gene sequence:

>543_bases
GTGTCACAGAATCTAACCCTCACAGAGAAGAAGAAGCTTCTCTCTCTTGCCAGAGAAGCAATCATTGATTACATCCGTGA
AGGGAACTTACCGCATCGTCTCGAGACCGCCCCCTCCCTCCAAGGTCAGCAGGGTTGTTTCGTCACCATCAAGATGAACG
GCACCCTCCGCGGATGTATTGGCAGCTTTGTATCAGACAAGCCGCTCTACAGACTCGTTCAAGATATGGCCATATCCGCC
GCCACCCGCGATCCTCGGTTCTACCCTATGAAACCGGCAGATCTTGAAGGATTTTCGATTGAAATCTCCGTCCTCGGCCC
CCTTGAAAAAATTTCATCACCAGAAGGTATCAAGGTGGGAACCCATGGCATCTACATAGAGAAGAACTCCTGCCGCGGCG
TACTCCTTCCCCAGGTGGCAGTCGAATACAACTGGGACAAGGATACCTTTCTGTCGCAAACATGTCTCAAAGCGGGCCTG
AAACCCGATGACTGGAAAGAAGGTGCCGACCTCTATGTATTCAGTGCCCAGATAATTTCCTGA

Upstream 100 bases:

>100_bases
TGACCATGCTCCCTCTCAGACAACAGGAATTAGCTCTTGTCACCAAAGGGAAAAGTTAGTAGCGTACGAAATGGACAAAC
CTTCAAGAAGGGGGGAGAAT

Downstream 100 bases:

>100_bases
GCAATTACACCGCCAAGAAAACCGCACATACGAAAAGGGGGAGATGTCTAGACATCTCCCCTTTTTCTGCACTTCTGGCT
ACATGCGGGAGTCCTTGGGA

Product: AMMECR1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSQNLTLTEKKKLLSLAREAIIDYIREGNLPHRLETAPSLQGQQGCFVTIKMNGTLRGCIGSFVSDKPLYRLVQDMAISA
ATRDPRFYPMKPADLEGFSIEISVLGPLEKISSPEGIKVGTHGIYIEKNSCRGVLLPQVAVEYNWDKDTFLSQTCLKAGL
KPDDWKEGADLYVFSAQIIS

Sequences:

>Translated_180_residues
MSQNLTLTEKKKLLSLAREAIIDYIREGNLPHRLETAPSLQGQQGCFVTIKMNGTLRGCIGSFVSDKPLYRLVQDMAISA
ATRDPRFYPMKPADLEGFSIEISVLGPLEKISSPEGIKVGTHGIYIEKNSCRGVLLPQVAVEYNWDKDTFLSQTCLKAGL
KPDDWKEGADLYVFSAQIIS
>Mature_179_residues
SQNLTLTEKKKLLSLAREAIIDYIREGNLPHRLETAPSLQGQQGCFVTIKMNGTLRGCIGSFVSDKPLYRLVQDMAISAA
TRDPRFYPMKPADLEGFSIEISVLGPLEKISSPEGIKVGTHGIYIEKNSCRGVLLPQVAVEYNWDKDTFLSQTCLKAGLK
PDDWKEGADLYVFSAQIIS

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733 [H]

Pfam domain/function: PF01871 AMMECR1 [H]

EC number: NA

Molecular weight: Translated: 19967; Mature: 19836

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNLTLTEKKKLLSLAREAIIDYIREGNLPHRLETAPSLQGQQGCFVTIKMNGTLRGCI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHH
GSFVSDKPLYRLVQDMAISAATRDPRFYPMKPADLEGFSIEISVLGPLEKISSPEGIKVG
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCHHHCCCCCCEEEC
THGIYIEKNSCRGVLLPQVAVEYNWDKDTFLSQTCLKAGLKPDDWKEGADLYVFSAQIIS
CCEEEEECCCCCEEEECEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SQNLTLTEKKKLLSLAREAIIDYIREGNLPHRLETAPSLQGQQGCFVTIKMNGTLRGCI
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHH
GSFVSDKPLYRLVQDMAISAATRDPRFYPMKPADLEGFSIEISVLGPLEKISSPEGIKVG
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCHHHCCCCCCEEEC
THGIYIEKNSCRGVLLPQVAVEYNWDKDTFLSQTCLKAGLKPDDWKEGADLYVFSAQIIS
CCEEEEECCCCCEEEECEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA