| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223883
Identifier: 78223883
GI number: 78223883
Start: 3034065
End: 3034334
Strand: Reverse
Name: 78223883
Synonym: Gmet_2687
Alternate gene names: NA
Gene position: 3034334-3034065 (Counterclockwise)
Preceding gene: 78223885
Following gene: 78223882
Centisome position: 75.91
GC content: 54.44
Gene sequence:
>270_bases GTGTTTATAAACCATGCGCTGTGCGCGAATATGGCAATCAAAAAAAGGAAAAGAGGTGAAACGTCAATGAAAAAACTGCT CTCTCTGACTCTGTGCCTTGCTATGGCTGTAGCTTTTGCTGCTGGCTGCAAGAAAAAAGAAGAAGCTCCGGCTCCGGCTC CTGCTGAGCAAGCTGCTCCGGCTCCGGCCGCTCCGGCTCAAGCTCCGATGTCTTCTGCTAAGGCCCCGGCCCCTGAAGCT GCTCCGGCTGCTCCGGCTGAGCACAAGTAA
Upstream 100 bases:
>100_bases TGCGTTATAATATACTGAAATTGTTGCACGAATACGAAATAATGTGGCGATTAAAAAAATCTTGACATAATTTTCAAAGC CAGTATATTCTCCCTTCGTT
Downstream 100 bases:
>100_bases TCAGCTTACTTCTGCAAGTATAGAAAAAGGCCTACAGAACACGTTCTGTAGGCCTTTTTCTATTTGAGCTTCCGAACCGG ATTGACACAGGACCAGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MFINHALCANMAIKKRKRGETSMKKLLSLTLCLAMAVAFAAGCKKKEEAPAPAPAEQAAPAPAAPAQAPMSSAKAPAPEA APAAPAEHK
Sequences:
>Translated_89_residues MFINHALCANMAIKKRKRGETSMKKLLSLTLCLAMAVAFAAGCKKKEEAPAPAPAEQAAPAPAAPAQAPMSSAKAPAPEA APAAPAEHK >Mature_89_residues MFINHALCANMAIKKRKRGETSMKKLLSLTLCLAMAVAFAAGCKKKEEAPAPAPAEQAAPAPAAPAQAPMSSAKAPAPEA APAAPAEHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9062; Mature: 9062
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFINHALCANMAIKKRKRGETSMKKLLSLTLCLAMAVAFAAGCKKKEEAPAPAPAEQAAP CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC APAAPAQAPMSSAKAPAPEAAPAAPAEHK CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFINHALCANMAIKKRKRGETSMKKLLSLTLCLAMAVAFAAGCKKKEEAPAPAPAEQAAP CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC APAAPAQAPMSSAKAPAPEAAPAAPAEHK CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA