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The map label for this gene is 78223867

Identifier: 78223867

GI number: 78223867

Start: 3019102

End: 3019863

Strand: Reverse

Name: 78223867

Synonym: Gmet_2671

Alternate gene names: NA

Gene position: 3019863-3019102 (Counterclockwise)

Preceding gene: 78223869

Following gene: 78223866

Centisome position: 75.55

GC content: 67.45

Gene sequence:

>762_bases
ATGGGCGTTGACGGGGAGACGATCGCTTCCCTCAGGCGCTACCTGGAGGAGCTGAAGGAGACCGGCGTGGACGAGATTCC
CCGGGCCGCGGCGTCGCGGGAAGAGCAACCGGTTCCGCCGCCGGAGGCTGTCGCTCCCGCTTCAGTTCCTGCTTCGTCAG
CGCCCGTTGCCGAGCCGCAAGCGGCGACCGCCGGCGAGACCCTGGACGATATCCGCCGCGATCTCGGGGAGTGCGTCCGC
TGCCAGTTGGGAAAACAGCGCACGAACCTCGTCTTCGGGGTCGGCAATCCCCGGGCCCGTCTCGTCTTCATCGGCGAGGC
CCCGGGCAGGGACGAGGACCTCAAGGGGGAGCCCTTCGTGGGGGAGGCGGGGCAGCTCCTCACGAAGATCATCCAGGCAA
TGGGGTTTGCGCGGGACGAGGTCTACATCTGCAACGTGCTCAAGTGCCGCCCGCCGGGGAACCGTAACCCCCACCACGAC
GAGATCGTCCAGTGCGCCCCCTTCATGCTCCGGCAGGTGCGGGCCATCGGTCCCGAGGCCGTGGTGGCGCTGGGTACCTT
TGCGGCCCAGACCCTCCTGGCCACCAAGGAGCCGATCTCCGCCCTCCGGGGGCGGTTCCACGACTACCACGGCATTCCCC
TCATGCCCACGTTCCATCCGGCGTTCCTCGTGCGCTACCCCGAACGCAAGCGGGAGGTGTGGGATGACATGAAGCAGGTC
ATGGCGCTCTTGGGGAAGAAAATGCCGACCAAGAAGGGATAG

Upstream 100 bases:

>100_bases
ATTGGCGGGTACGAAGAGGATGATGAGCAGAAATATCGGCAGGATAGGCATGGGAATCATGGTATGAAACCGTCGGAAAA
ATGTAAAGGAATTTGCCACC

Downstream 100 bases:

>100_bases
GAACAGGAACGATGGCAAAAGGGTATCAGGCCAACAGGGAGCGGCAGGAGCAGATAGGCGCGCTGGGGAAGGCCCTGGCC
AAGCGGGCAGGGTTTGCCTG

Product: Phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; Phage DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MGVDGETIASLRRYLEELKETGVDEIPRAAASREEQPVPPPEAVAPASVPASSAPVAEPQAATAGETLDDIRRDLGECVR
CQLGKQRTNLVFGVGNPRARLVFIGEAPGRDEDLKGEPFVGEAGQLLTKIIQAMGFARDEVYICNVLKCRPPGNRNPHHD
EIVQCAPFMLRQVRAIGPEAVVALGTFAAQTLLATKEPISALRGRFHDYHGIPLMPTFHPAFLVRYPERKREVWDDMKQV
MALLGKKMPTKKG

Sequences:

>Translated_253_residues
MGVDGETIASLRRYLEELKETGVDEIPRAAASREEQPVPPPEAVAPASVPASSAPVAEPQAATAGETLDDIRRDLGECVR
CQLGKQRTNLVFGVGNPRARLVFIGEAPGRDEDLKGEPFVGEAGQLLTKIIQAMGFARDEVYICNVLKCRPPGNRNPHHD
EIVQCAPFMLRQVRAIGPEAVVALGTFAAQTLLATKEPISALRGRFHDYHGIPLMPTFHPAFLVRYPERKREVWDDMKQV
MALLGKKMPTKKG
>Mature_252_residues
GVDGETIASLRRYLEELKETGVDEIPRAAASREEQPVPPPEAVAPASVPASSAPVAEPQAATAGETLDDIRRDLGECVRC
QLGKQRTNLVFGVGNPRARLVFIGEAPGRDEDLKGEPFVGEAGQLLTKIIQAMGFARDEVYICNVLKCRPPGNRNPHHDE
IVQCAPFMLRQVRAIGPEAVVALGTFAAQTLLATKEPISALRGRFHDYHGIPLMPTFHPAFLVRYPERKREVWDDMKQVM
ALLGKKMPTKKG

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 27724; Mature: 27593

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVDGETIASLRRYLEELKETGVDEIPRAAASREEQPVPPPEAVAPASVPASSAPVAEPQ
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AATAGETLDDIRRDLGECVRCQLGKQRTNLVFGVGNPRARLVFIGEAPGRDEDLKGEPFV
CHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
GEAGQLLTKIIQAMGFARDEVYICNVLKCRPPGNRNPHHDEIVQCAPFMLRQVRAIGPEA
CHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
VVALGTFAAQTLLATKEPISALRGRFHDYHGIPLMPTFHPAFLVRYPERKREVWDDMKQV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEECCHHHHHHHHHHHHH
MALLGKKMPTKKG
HHHHCCCCCCCCC
>Mature Secondary Structure 
GVDGETIASLRRYLEELKETGVDEIPRAAASREEQPVPPPEAVAPASVPASSAPVAEPQ
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AATAGETLDDIRRDLGECVRCQLGKQRTNLVFGVGNPRARLVFIGEAPGRDEDLKGEPFV
CHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
GEAGQLLTKIIQAMGFARDEVYICNVLKCRPPGNRNPHHDEIVQCAPFMLRQVRAIGPEA
CHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
VVALGTFAAQTLLATKEPISALRGRFHDYHGIPLMPTFHPAFLVRYPERKREVWDDMKQV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEECCHHHHHHHHHHHHH
MALLGKKMPTKKG
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA