Click here to switch to the map view.

The map label for this gene is 78223856

Identifier: 78223856

GI number: 78223856

Start: 3009045

End: 3009854

Strand: Reverse

Name: 78223856

Synonym: Gmet_2660

Alternate gene names: NA

Gene position: 3009854-3009045 (Counterclockwise)

Preceding gene: 78223857

Following gene: 78223855

Centisome position: 75.29

GC content: 60.25

Gene sequence:

>810_bases
ATGAAGGCATCGACAGTTGTGACGAAAAGGTGCAATCCCCGGGCCCTGCTGCCGTGCTTGGTTTTGCTGGCGGCGCTGGC
AGTGTGGGATGGGCCGGCACAGGCCGGCACTTCCCTTCCCTCTTCGGCATTGCCGCTAACGCATTCGGTTCCCCACGAGC
TGATCCCGGGAATTCCCGACCCCGACGGGTTTGTGACCGTGGAGGTGGGAGACTACTTCTCCTGCGATATCCCGCCGGAG
TGGTCACGGGTCGACAACTACGGATCCGGCCTCGGCTTGAGCAATGAGGAGAAAAAGACCTACGGTTTTCACCTGAAAGC
CCCGGAGCCGGGCGAACCCTCCGTCGCTATCTCCATCTTCTACTACGCGGAAGGGAACCTGATGTACAAATCCGTGGACC
ACTACCTCAGGGTTTTCGCGCAGCCGGCTTTGGGGGTGTCCCTTGATGGGAGCAGTTACGGGGATGTCACGGCCGTGAAG
GTTGCCGGCAGGGATGGAATGGTGTTCGAGCGTGTCAAGAAGGAGTACGCGCCGAGGGAAAGCGGGACGGGCGGACCCGT
AAAGCCTGGTGTGTATATCCGGCCGGGCTTGAACGCCACAAGGATACCCATCAGGGAGCGGTTCGTGGTGCTCCCCGCGA
AGCAGGGGTTTTTCGCCCTGCGCTACACCGCCCCAGAGGAAAAATTCCGGGAGTTCCTCCCTGTTTTCGAGAAGGTTACG
CAGAGGTTCTTCCCGGGCGGCAGGTACACCTATGAATCGAGAGACACGGAGAGGGGGCCCTCCCATGACTATGGGCACGA
GGTTTATTAA

Upstream 100 bases:

>100_bases
CCATCAGGAACGACAGAGGGCTAACCCCCCGGCAACTGGCGGAGGAGCGCGGCTTCGCATCGATCGTGGAACTGTTCAGG
AACTGGGGGAAAAACACGAT

Downstream 100 bases:

>100_bases
AGTTAAGACCCTCAGGGGGCGGGGGCTTCTGTTCCTGGCGGCCTGCCAGTTCTGCGCCGCTGCCGCGTTCACTGCGGAGG
CGTCAGCCGGCGCCTTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKASTVVTKRCNPRALLPCLVLLAALAVWDGPAQAGTSLPSSALPLTHSVPHELIPGIPDPDGFVTVEVGDYFSCDIPPE
WSRVDNYGSGLGLSNEEKKTYGFHLKAPEPGEPSVAISIFYYAEGNLMYKSVDHYLRVFAQPALGVSLDGSSYGDVTAVK
VAGRDGMVFERVKKEYAPRESGTGGPVKPGVYIRPGLNATRIPIRERFVVLPAKQGFFALRYTAPEEKFREFLPVFEKVT
QRFFPGGRYTYESRDTERGPSHDYGHEVY

Sequences:

>Translated_269_residues
MKASTVVTKRCNPRALLPCLVLLAALAVWDGPAQAGTSLPSSALPLTHSVPHELIPGIPDPDGFVTVEVGDYFSCDIPPE
WSRVDNYGSGLGLSNEEKKTYGFHLKAPEPGEPSVAISIFYYAEGNLMYKSVDHYLRVFAQPALGVSLDGSSYGDVTAVK
VAGRDGMVFERVKKEYAPRESGTGGPVKPGVYIRPGLNATRIPIRERFVVLPAKQGFFALRYTAPEEKFREFLPVFEKVT
QRFFPGGRYTYESRDTERGPSHDYGHEVY
>Mature_269_residues
MKASTVVTKRCNPRALLPCLVLLAALAVWDGPAQAGTSLPSSALPLTHSVPHELIPGIPDPDGFVTVEVGDYFSCDIPPE
WSRVDNYGSGLGLSNEEKKTYGFHLKAPEPGEPSVAISIFYYAEGNLMYKSVDHYLRVFAQPALGVSLDGSSYGDVTAVK
VAGRDGMVFERVKKEYAPRESGTGGPVKPGVYIRPGLNATRIPIRERFVVLPAKQGFFALRYTAPEEKFREFLPVFEKVT
QRFFPGGRYTYESRDTERGPSHDYGHEVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29638; Mature: 29638

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASTVVTKRCNPRALLPCLVLLAALAVWDGPAQAGTSLPSSALPLTHSVPHELIPGIPD
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCC
PDGFVTVEVGDYFSCDIPPEWSRVDNYGSGLGLSNEEKKTYGFHLKAPEPGEPSVAISIF
CCCEEEEEECCEEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEE
YYAEGNLMYKSVDHYLRVFAQPALGVSLDGSSYGDVTAVKVAGRDGMVFERVKKEYAPRE
EEECCCEEEHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
SGTGGPVKPGVYIRPGLNATRIPIRERFVVLPAKQGFFALRYTAPEEKFREFLPVFEKVT
CCCCCCCCCCEEECCCCCCEECCHHHEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
QRFFPGGRYTYESRDTERGPSHDYGHEVY
HHHCCCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKASTVVTKRCNPRALLPCLVLLAALAVWDGPAQAGTSLPSSALPLTHSVPHELIPGIPD
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCC
PDGFVTVEVGDYFSCDIPPEWSRVDNYGSGLGLSNEEKKTYGFHLKAPEPGEPSVAISIF
CCCEEEEEECCEEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEE
YYAEGNLMYKSVDHYLRVFAQPALGVSLDGSSYGDVTAVKVAGRDGMVFERVKKEYAPRE
EEECCCEEEHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
SGTGGPVKPGVYIRPGLNATRIPIRERFVVLPAKQGFFALRYTAPEEKFREFLPVFEKVT
CCCCCCCCCCEEECCCCCCEECCHHHEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
QRFFPGGRYTYESRDTERGPSHDYGHEVY
HHHCCCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA