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The map label for this gene is 78223842

Identifier: 78223842

GI number: 78223842

Start: 2995683

End: 2996213

Strand: Direct

Name: 78223842

Synonym: Gmet_2646

Alternate gene names: NA

Gene position: 2995683-2996213 (Clockwise)

Preceding gene: 78223841

Following gene: 78223843

Centisome position: 74.94

GC content: 53.86

Gene sequence:

>531_bases
ATGGCGCGTTTGACAACGGTGGAAGTAAGTGCGGTTTCAGGGGAGACGGCGGCTATATTCAAGGAGATCGAGGGTGCATT
CGGCATGGTGCCAAATCTTTTCAAGAGCTACGCCCATCACCCGCCCCTGCTGAAGGCCAACTGGAACAAGGTCAAGGCAG
TAATGATGGAAGGGACCCTGAGCCAGAAGGTAAAGCAGACCATAGCGGTGCTGGTTTCCAGGGACAATGGCTGCACCTAC
TGCGTGGCAGCTCACACCGGGGCGCTTAAGGCGATTGGAATCTCCGATGAGGAAATCGGTATTATTATGCAGAGTATCGA
ACAGGCCGACTTCAGCGCGAAGGAAAAGGCGCTCATCGGTTTTGCCAGGAAAGCGAATACAAATCCCACCAGAATAGAGG
ATGCCGAGTTTGACGCCCTGCGTCAGGCAGGGGTATCGGACGCCGAGATAGTGGAGGCGCTGGGGGTGATGGAACTCTTT
ACTGCCTTTAACAAGTTCCTTGACTCCCTGCAGGTGGAGATCGATTTTTAA

Upstream 100 bases:

>100_bases
ATGCGAGTGAAGTAGCAAAATTTTTTTCAATAAAAACAAACCAAATGGTCGGTTTGTTGGCCCTCAGGGGCAAATACAAA
CAGCTGAAAAGGAGAGGCAG

Downstream 100 bases:

>100_bases
ACAGCCGGAGGAAGATGGGTGGATTCGTGCGGCTGAAGGTGCTCGAAGCGCCTTCGGCCGTTTACCGGCATTAGCCTGAA
TAATCGGCACTACAACATGG

Product: alkylhydroperoxidase AhpD core

Products: NA

Alternate protein names: Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Core; Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Family Core Domain Protein; Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; Peroxidase-Like; Peroxidase-Like Protein; Alkylhydroperoxidase AhpD Domain Protein; Alkylhydroperoxidase-Like Protein; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Protein; Carboxymuconolactone Decarboxylase Family; 4-Carboxymuconolactone Decarboxylase; Fusion Protein; Response Regulator; Peroxidase-Related Prptein; MIP-(Macrophage Infectivity Potentiator)-Like Protein; Short-Chain Dehydrogenase/Reductase; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator-Related Protein; Antioxydant Protein; Peroxidase; Alkylhydroperoxidase Like Protein Ahpd Family; Alkylhydroperoxidase-Like Protein AhpD Family; Peroxidase-Related Subfamily; Peroxidase-Related Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MARLTTVEVSAVSGETAAIFKEIEGAFGMVPNLFKSYAHHPPLLKANWNKVKAVMMEGTLSQKVKQTIAVLVSRDNGCTY
CVAAHTGALKAIGISDEEIGIIMQSIEQADFSAKEKALIGFARKANTNPTRIEDAEFDALRQAGVSDAEIVEALGVMELF
TAFNKFLDSLQVEIDF

Sequences:

>Translated_176_residues
MARLTTVEVSAVSGETAAIFKEIEGAFGMVPNLFKSYAHHPPLLKANWNKVKAVMMEGTLSQKVKQTIAVLVSRDNGCTY
CVAAHTGALKAIGISDEEIGIIMQSIEQADFSAKEKALIGFARKANTNPTRIEDAEFDALRQAGVSDAEIVEALGVMELF
TAFNKFLDSLQVEIDF
>Mature_175_residues
ARLTTVEVSAVSGETAAIFKEIEGAFGMVPNLFKSYAHHPPLLKANWNKVKAVMMEGTLSQKVKQTIAVLVSRDNGCTYC
VAAHTGALKAIGISDEEIGIIMQSIEQADFSAKEKALIGFARKANTNPTRIEDAEFDALRQAGVSDAEIVEALGVMELFT
AFNKFLDSLQVEIDF

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19085; Mature: 18954

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLTTVEVSAVSGETAAIFKEIEGAFGMVPNLFKSYAHHPPLLKANWNKVKAVMMEGTL
CCCEEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
SQKVKQTIAVLVSRDNGCTYCVAAHTGALKAIGISDEEIGIIMQSIEQADFSAKEKALIG
HHHHHHHHHHHEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHH
FARKANTNPTRIEDAEFDALRQAGVSDAEIVEALGVMELFTAFNKFLDSLQVEIDF
HHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
ARLTTVEVSAVSGETAAIFKEIEGAFGMVPNLFKSYAHHPPLLKANWNKVKAVMMEGTL
CCEEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
SQKVKQTIAVLVSRDNGCTYCVAAHTGALKAIGISDEEIGIIMQSIEQADFSAKEKALIG
HHHHHHHHHHHEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHH
FARKANTNPTRIEDAEFDALRQAGVSDAEIVEALGVMELFTAFNKFLDSLQVEIDF
HHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA