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The map label for this gene is ymdC [C]

Identifier: 78223825

GI number: 78223825

Start: 2971960

End: 2974230

Strand: Direct

Name: ymdC [C]

Synonym: Gmet_2628

Alternate gene names: 78223825

Gene position: 2971960-2974230 (Clockwise)

Preceding gene: 78223824

Following gene: 78223828

Centisome position: 74.35

GC content: 63.19

Gene sequence:

>2271_bases
ATGAAAACCCGTTTCGTCGCCCCCCTGCTCCTTGCCCTCGCCATGACCGGCTGCGCCACGCAGAAGCAGGCAGGTCTTCC
CCTCGACACCGTCAGCCAGGCGGCATCCGCCGGCCCCCTCTCCATCACCGAGGCCCAGGTCATCACCGACAACGACGCGG
CGTTTCTCTCCAAGCTCCGCATGGTCCGGGGCGCGCAGCGCTCCATCGACATGATGTACTACATCTATGCCGACGACCAC
AGCTCGTCGGTGCTGACCTCAGCCCTCATGGACGCGGCGCGGCGTGGGGTTACCGTGAGGCTCCTCGTGGATTACCACAC
CAACTACAAGCACCTCGACCTCTTCTCCCTCATGGAGAAGGAGGGGAACGGCAACCTCCAGGTGCGGTTCTACAACCGGC
CGACCCGCAACATCATCAAGGACGCCGTCTATCTGACCATGGGATGCTCTCCCGAAACTGCTGCGGCCAGACCCGAGGCA
TGCAGCGCCGAGAAATTCGCCGCCATCGACAAGCTCTTCGCCGACGAAACGATCAACGGCAGACCGGCGGCGGACCGGAA
CATCTCCAACCTCGACATCGGCAACTCGGGGCTCTTCCTCTCCGGCCTCTACTCGAAGCGGGGCGACGTGATGGCGCTCG
CTGTCCAGAGCGGACAGCAGATCGACGTCCAGAGCCTGAAGGGAGGCGCCTCCACAACCACTCCCGAGCAGGAGGAGCAG
CTGAAGCGCCTCGGCAAGGCCTACTGGGAGTCGAGGACCGGCGCACCGTTCCAGCGGCTCGCATCAAATGCGGAGCTCTT
CTTCGCCTTCGCCATGTACGGCGGCCAGCTCAACCCGATCAAGGAGACCGTCACCTCGCTGCTGCCGGTCGACAGGAAGC
TCTCGGACGATGAACTGCGGGACTGGGACCACCTGACCGACTACCTCCACCACAAGCTCCTCCTGGTGGACCGCAAGGAA
CTCCAGATGGGGGGAAGGAACGTGGAGAACTCCTACCACATGCGCCCCAATCCCCTGACCAGCAAGTACGTCTTCATGGA
CACCGACATCCATGCCCTCCTGCCACAGGGGGGCGAGGAGGTCGCCACGGCGTTCGACTCCCTCTGGAATTTCGACGCTA
TGGTGGCCCCCCTGGCCGAGGTGCGCCAGCATGCCCCCAACGACTTCGTCGTCGCCATGAAATATGCCGAGAAGGCCTGC
GCCGGGGAAACGGGGAAAGAGGAGCGCGATGCCTGCATCAAGAAGGAACTGGAGGGAACCGCTCCCTCCCTGGACAAACG
GATGGCCGACTGCCGCACGACCATGGAGGAGAACGCCCGGGCCTACAACGAGACCTATCTCCCCACGATTCCGCAGCAGC
CGACGCAAACCTTTACCGTGGATAGCGGCAGCGTCCTCGCCTACCTCGAAAACATTCCGTTCAACAGGGCGCTCCCCCCG
GAGAAGCGGGTACGGACTTACGGCGCCCCTGCCGGCGAGGAGGCCAGGAGCGGAAAGTACATCCACGACGTCTGGCTCAG
GGAGATTCCGGCGGTCTGCGCGTCTGCCACCCCCGATGCCCCGAAGCGGCTTATCCTCCATAACGCCTACTTTTTCCCCG
CCGCCAACCTCACCCATGAGCTGAGCCGGATGGTGAACGGCGATTACGACTGCTCCAACGTCACCGTGACGGTCCTCACC
AACTCCATCCAGACCACCGACCTCAACGTGGTGAACCTCGCCGCCCGCCACGCCCTCAAGGCGTTCACCGAGTTCTACCA
GCAGCAGGGCGACCCGGCCAAGCGGGCGAAATTCGACTACTACGAGTATCAGCCCCGGACCGACGAACCTCTCTCGCTCC
ACACCAAGGTGTCAGTATTCGGTGACGACGTCACCATCGGCTCGGCCAACGCCGACGTCCGCAGCTTCATGATGGACAGC
AACAACGTCATGTTCGTCCGCAACGCCCCCGGCTTCCTCGCGGAGTACACCGCCTTCATGCAGCGGCTCCTTGACGACCC
GGCCCGGACGAAGAAGCTCAACGACTATTTCACCGCCACCCCCCGCGACACGATGCTCCAGGAAGACCTGGCCACCTTCC
GCCAGATCCTGGCCAAGTACGGCGTCGACAAGAAACTGGACGAGGGGCAACGGAAAGAAGTCGAGGCGCGCTTTGTCCAG
ATGCTCAACGACGCCTACGAACTGACGAAGGGATCCATCGACACCGGAAGCAGCGCGGCGAAGCGGCGGGAGAGCCAGGA
CAAATTCAACGAGGAGTTCAAGCCGATCTGA

Upstream 100 bases:

>100_bases
GGCGACATCTGGAACGAGAGGTTCATCGATTTCATGCGGCAGTTCATCCTGTTCACGACCATTGTCGAAGAATAACCGCA
ATCTACTAACGGAGGCCCCC

Downstream 100 bases:

>100_bases
TCTCGGCGGGGCAGTTGCACTTCAAATGGATTTATCAGCACGATTCAGTTGGTAAAGTGGTGCGTCCCGAAACCGGGAAG
TGATTCGCGGATGAGGCGGG

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 756; Mature: 756

Protein sequence:

>756_residues
MKTRFVAPLLLALAMTGCATQKQAGLPLDTVSQAASAGPLSITEAQVITDNDAAFLSKLRMVRGAQRSIDMMYYIYADDH
SSSVLTSALMDAARRGVTVRLLVDYHTNYKHLDLFSLMEKEGNGNLQVRFYNRPTRNIIKDAVYLTMGCSPETAAARPEA
CSAEKFAAIDKLFADETINGRPAADRNISNLDIGNSGLFLSGLYSKRGDVMALAVQSGQQIDVQSLKGGASTTTPEQEEQ
LKRLGKAYWESRTGAPFQRLASNAELFFAFAMYGGQLNPIKETVTSLLPVDRKLSDDELRDWDHLTDYLHHKLLLVDRKE
LQMGGRNVENSYHMRPNPLTSKYVFMDTDIHALLPQGGEEVATAFDSLWNFDAMVAPLAEVRQHAPNDFVVAMKYAEKAC
AGETGKEERDACIKKELEGTAPSLDKRMADCRTTMEENARAYNETYLPTIPQQPTQTFTVDSGSVLAYLENIPFNRALPP
EKRVRTYGAPAGEEARSGKYIHDVWLREIPAVCASATPDAPKRLILHNAYFFPAANLTHELSRMVNGDYDCSNVTVTVLT
NSIQTTDLNVVNLAARHALKAFTEFYQQQGDPAKRAKFDYYEYQPRTDEPLSLHTKVSVFGDDVTIGSANADVRSFMMDS
NNVMFVRNAPGFLAEYTAFMQRLLDDPARTKKLNDYFTATPRDTMLQEDLATFRQILAKYGVDKKLDEGQRKEVEARFVQ
MLNDAYELTKGSIDTGSSAAKRRESQDKFNEEFKPI

Sequences:

>Translated_756_residues
MKTRFVAPLLLALAMTGCATQKQAGLPLDTVSQAASAGPLSITEAQVITDNDAAFLSKLRMVRGAQRSIDMMYYIYADDH
SSSVLTSALMDAARRGVTVRLLVDYHTNYKHLDLFSLMEKEGNGNLQVRFYNRPTRNIIKDAVYLTMGCSPETAAARPEA
CSAEKFAAIDKLFADETINGRPAADRNISNLDIGNSGLFLSGLYSKRGDVMALAVQSGQQIDVQSLKGGASTTTPEQEEQ
LKRLGKAYWESRTGAPFQRLASNAELFFAFAMYGGQLNPIKETVTSLLPVDRKLSDDELRDWDHLTDYLHHKLLLVDRKE
LQMGGRNVENSYHMRPNPLTSKYVFMDTDIHALLPQGGEEVATAFDSLWNFDAMVAPLAEVRQHAPNDFVVAMKYAEKAC
AGETGKEERDACIKKELEGTAPSLDKRMADCRTTMEENARAYNETYLPTIPQQPTQTFTVDSGSVLAYLENIPFNRALPP
EKRVRTYGAPAGEEARSGKYIHDVWLREIPAVCASATPDAPKRLILHNAYFFPAANLTHELSRMVNGDYDCSNVTVTVLT
NSIQTTDLNVVNLAARHALKAFTEFYQQQGDPAKRAKFDYYEYQPRTDEPLSLHTKVSVFGDDVTIGSANADVRSFMMDS
NNVMFVRNAPGFLAEYTAFMQRLLDDPARTKKLNDYFTATPRDTMLQEDLATFRQILAKYGVDKKLDEGQRKEVEARFVQ
MLNDAYELTKGSIDTGSSAAKRRESQDKFNEEFKPI
>Mature_756_residues
MKTRFVAPLLLALAMTGCATQKQAGLPLDTVSQAASAGPLSITEAQVITDNDAAFLSKLRMVRGAQRSIDMMYYIYADDH
SSSVLTSALMDAARRGVTVRLLVDYHTNYKHLDLFSLMEKEGNGNLQVRFYNRPTRNIIKDAVYLTMGCSPETAAARPEA
CSAEKFAAIDKLFADETINGRPAADRNISNLDIGNSGLFLSGLYSKRGDVMALAVQSGQQIDVQSLKGGASTTTPEQEEQ
LKRLGKAYWESRTGAPFQRLASNAELFFAFAMYGGQLNPIKETVTSLLPVDRKLSDDELRDWDHLTDYLHHKLLLVDRKE
LQMGGRNVENSYHMRPNPLTSKYVFMDTDIHALLPQGGEEVATAFDSLWNFDAMVAPLAEVRQHAPNDFVVAMKYAEKAC
AGETGKEERDACIKKELEGTAPSLDKRMADCRTTMEENARAYNETYLPTIPQQPTQTFTVDSGSVLAYLENIPFNRALPP
EKRVRTYGAPAGEEARSGKYIHDVWLREIPAVCASATPDAPKRLILHNAYFFPAANLTHELSRMVNGDYDCSNVTVTVLT
NSIQTTDLNVVNLAARHALKAFTEFYQQQGDPAKRAKFDYYEYQPRTDEPLSLHTKVSVFGDDVTIGSANADVRSFMMDS
NNVMFVRNAPGFLAEYTAFMQRLLDDPARTKKLNDYFTATPRDTMLQEDLATFRQILAKYGVDKKLDEGQRKEVEARFVQ
MLNDAYELTKGSIDTGSSAAKRRESQDKFNEEFKPI

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84395; Mature: 84395

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRFVAPLLLALAMTGCATQKQAGLPLDTVSQAASAGPLSITEAQVITDNDAAFLSKLR
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEECCEEEEECCHHHHHHHHH
MVRGAQRSIDMMYYIYADDHSSSVLTSALMDAARRGVTVRLLVDYHTNYKHLDLFSLMEK
HHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHH
EGNGNLQVRFYNRPTRNIIKDAVYLTMGCSPETAAARPEACSAEKFAAIDKLFADETING
CCCCCEEEEEECCCHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
RPAADRNISNLDIGNSGLFLSGLYSKRGDVMALAVQSGQQIDVQSLKGGASTTTPEQEEQ
CCCCCCCCCCCCCCCCCCEEEEHHCCCCCEEEEEECCCCEEEHHHCCCCCCCCCCHHHHH
LKRLGKAYWESRTGAPFQRLASNAELFFAFAMYGGQLNPIKETVTSLLPVDRKLSDDELR
HHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHCCCCCCCCCHHHH
DWDHLTDYLHHKLLLVDRKELQMGGRNVENSYHMRPNPLTSKYVFMDTDIHALLPQGGEE
HHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCCCHH
VATAFDSLWNFDAMVAPLAEVRQHAPNDFVVAMKYAEKACAGETGKEERDACIKKELEGT
HHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHCCC
APSLDKRMADCRTTMEENARAYNETYLPTIPQQPTQTFTVDSGSVLAYLENIPFNRALPP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEHHHCCCCCCCCCC
EKRVRTYGAPAGEEARSGKYIHDVWLREIPAVCASATPDAPKRLILHNAYFFPAANLTHE
HHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEECCEECCCCHHHHH
LSRMVNGDYDCSNVTVTVLTNSIQTTDLNVVNLAARHALKAFTEFYQQQGDPAKRAKFDY
HHHHHCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
YEYQPRTDEPLSLHTKVSVFGDDVTIGSANADVRSFMMDSNNVMFVRNAPGFLAEYTAFM
EECCCCCCCCCEEEEEEEEECCCEEECCCCHHHHHHEECCCCEEEEECCCCHHHHHHHHH
QRLLDDPARTKKLNDYFTATPRDTMLQEDLATFRQILAKYGVDKKLDEGQRKEVEARFVQ
HHHHCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MLNDAYELTKGSIDTGSSAAKRRESQDKFNEEFKPI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTRFVAPLLLALAMTGCATQKQAGLPLDTVSQAASAGPLSITEAQVITDNDAAFLSKLR
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEECCEEEEECCHHHHHHHHH
MVRGAQRSIDMMYYIYADDHSSSVLTSALMDAARRGVTVRLLVDYHTNYKHLDLFSLMEK
HHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHH
EGNGNLQVRFYNRPTRNIIKDAVYLTMGCSPETAAARPEACSAEKFAAIDKLFADETING
CCCCCEEEEEECCCHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
RPAADRNISNLDIGNSGLFLSGLYSKRGDVMALAVQSGQQIDVQSLKGGASTTTPEQEEQ
CCCCCCCCCCCCCCCCCCEEEEHHCCCCCEEEEEECCCCEEEHHHCCCCCCCCCCHHHHH
LKRLGKAYWESRTGAPFQRLASNAELFFAFAMYGGQLNPIKETVTSLLPVDRKLSDDELR
HHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHCCCCCCCCCHHHH
DWDHLTDYLHHKLLLVDRKELQMGGRNVENSYHMRPNPLTSKYVFMDTDIHALLPQGGEE
HHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCCCHH
VATAFDSLWNFDAMVAPLAEVRQHAPNDFVVAMKYAEKACAGETGKEERDACIKKELEGT
HHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHCCC
APSLDKRMADCRTTMEENARAYNETYLPTIPQQPTQTFTVDSGSVLAYLENIPFNRALPP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEHHHCCCCCCCCCC
EKRVRTYGAPAGEEARSGKYIHDVWLREIPAVCASATPDAPKRLILHNAYFFPAANLTHE
HHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEECCEECCCCHHHHH
LSRMVNGDYDCSNVTVTVLTNSIQTTDLNVVNLAARHALKAFTEFYQQQGDPAKRAKFDY
HHHHHCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
YEYQPRTDEPLSLHTKVSVFGDDVTIGSANADVRSFMMDSNNVMFVRNAPGFLAEYTAFM
EECCCCCCCCCEEEEEEEEECCCEEECCCCHHHHHHEECCCCEEEEECCCCHHHHHHHHH
QRLLDDPARTKKLNDYFTATPRDTMLQEDLATFRQILAKYGVDKKLDEGQRKEVEARFVQ
HHHHCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MLNDAYELTKGSIDTGSSAAKRRESQDKFNEEFKPI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA