| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is cotA [H]
Identifier: 78223780
GI number: 78223780
Start: 2933896
End: 2936100
Strand: Reverse
Name: cotA [H]
Synonym: Gmet_2583
Alternate gene names: 78223780
Gene position: 2936100-2933896 (Counterclockwise)
Preceding gene: 78223781
Following gene: 78223779
Centisome position: 73.45
GC content: 59.41
Gene sequence:
>2205_bases ATGAACAAGATCAGCAGAAGGAAATTCCTGCAGATAAGCGGATTTGCGGCAGGCGCTACCATGCTACCGCTGCCGATGAA GTGGCTCGGGCGGCGTGATGTCTTTGCTTTCTACCAGACGCCGGCCAACCAACTCGGACTCTTTAAAACCAAGCTGCGGG GCGTTGGCCCGGCCGGCATCCCGCTGGCGACTCCGGATGGGTCGGCAGGTATAGGGGGGGCTGCCCATTACACTTTCAAT ATCGGGCAGTTCACCGATCAGTTGCACCCCGCTCTTGGTCCGACGACCCTCTGGGGGTACAATCCACAGAATGCCTTGGG CGTTACGGGGGTTCCGGCCCAGAAGCACCTGGGTGGAATCATTGTGGCAAATAAGGGGGTGCCGATCCAGCTCACGTTCA CCAACAATCTTCCGAACAAGCATATCCTGCCTGTGGACAAGAGCGCCAATTTTCCCGATGCGGCGCAACATGTAAATGAC GCTTCCGTGCACCTCCATGGCGGATTTGTCCCGTGGATCAGCGATGGCGGACCCATGGCCTATTTTGGCCCCCCGACCAT CGCTAACCCCAATGGCGTTTACGGCCCGAGTGTTTCCGACGGAGTGAATCCGAACCTGTTTCAGCAGGTGTTGAACTCTA ACCTGGATCCGGGGCAGGCCGAGTATTACTACCCCAACCAGCAGAGCGCCCGGATGATGTGGTATCACGACCACACCCAC GACTGCACGCGTCTCAACGCGTACGCAGGACTTGCCTCCGTCTACCTCATTCGGGATACCTTCGAGGGGAACCTGAGGAA CCTGGGACTTCCCGATTATATCGAAAACGGGGGATTCGAAATCCCCCTCGTCATTCAGGACAAGATCTTCGTCGGTTCGA ATATTGGCCTCTATGACCCGACGTGGCCGGGGCCGAGAACGCCGGGAAGCCTCTGGTACCCCCATATTTACGAGAAGAAC CGCTGGCACAAGGTTTACAGCCCCCTGCGGATGCCTGCCCCCTCAGCCGTTCCCGAGATGTTCGGAGATACCATGCTGGT CAACGGTACGGTATTCCCAGAGGCCACAGTGGAGGCGCGTCCCTACCGTCTGCGGATTCTCAACGTCTGCAATGCCCGGT TCATGAACCTGCAGCTCTATGTGGACGACGGCAGCCTGAATGGTGTTACCTTGAATCCCGTTACCGGCAATCCCCCGCCA AGTGCCGCATTTGTGGACGGCACACAGAACCAGCCGGCCGTCCTCCAGCTCGGCACCGAGGGGGGCTTCCTGCCAACTCC GGTGCTCGTCCCGACCAATGTGCCGTTCGGCTTCGATCCGGTGACCGGCGCCCCCACCGGGAGCATCCTCATGGGGCCGG CGGAGCGGGTCGATCTCATCGTCGACTTCAAAAATTACATCGGGAAAAATGTTATCCTTTACTCCGATGCGCCGGCGCCG TTCCCCTTGGGAGATCCGCGCAACGACTACTTCCCGCAGTGGAACACCGCAGGCAACCCGGCCAACGCCCTGACCAAGAA CGGTTTCGGCCCCAATACCCGCGTCCTCATGCGATTCAAAGTGAAGGCGGCGACCAGCAGCGTCGCGGCTGTTTCGATCA ATACGGCCACCGATCTGTCGGCCGGAAACGATCCCCTTCCGCTCCCCGGAGGAGCTCCGATCATCGGTGGTGCGCTGCAG CTCCCTCCGGGAGTTCCTGTCAGACCGCTCACCCTGAACGAGGTTTTCGACAGCTACGGCCGTCTCCTCCAACTCCTCGG GACGAACGTCCCCACTGCCAACGCCTTTGGCTTGGGCTACATGGACAATGCGACGGAGGTTGTCAATCTTGTGAATGGGG AGAAGGTGGAGATATGGCAGATAGCCAACCTGACCGGCGACACCCATCCGATTCACTTCCACCTGGTGAACGCCCAGCTC CTCGGGCGGCAGCCCTTTGACGTGGTGCACTATAACGGGACTCCCACGTATATCGGCCCGGCCCGCGGTCCCGACCCGAA CGAAACGGGATTCAAGGAAACGATCCGGATGAACCCCGGCGAGGTCACGACGGTGATTATGAGGTTTAAATTCCCGACGG TCCCGTTCACCGTCCCGAACAGCCTGAACCCGAACTTGGGGATAAGCGGGAAAGAGTACGTGTGGCATTGCCATATCCTC GATCATGAGGAGCACGACATGATGAGGCCGCTGGTGGTCATCTAG
Upstream 100 bases:
>100_bases CCTGGGAGTGTTCCTGTTCAGAAAAAGAATAACTGGAATCTCCTTTTAGACCGTTGAATGGACTTGTCTGGGCTTGCAGC TAACAGAAAGGACGGACCAT
Downstream 100 bases:
>100_bases AATGAGCCTCCAGGCGACGACAGCAACCCGGTGCGTTAGCGCCGGGTGAGGAGAAGCCCCGCGACGTTTTGCGGGGCTTC TGTTTGGGATCACGGGAATC
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MNKISRRKFLQISGFAAGATMLPLPMKWLGRRDVFAFYQTPANQLGLFKTKLRGVGPAGIPLATPDGSAGIGGAAHYTFN IGQFTDQLHPALGPTTLWGYNPQNALGVTGVPAQKHLGGIIVANKGVPIQLTFTNNLPNKHILPVDKSANFPDAAQHVND ASVHLHGGFVPWISDGGPMAYFGPPTIANPNGVYGPSVSDGVNPNLFQQVLNSNLDPGQAEYYYPNQQSARMMWYHDHTH DCTRLNAYAGLASVYLIRDTFEGNLRNLGLPDYIENGGFEIPLVIQDKIFVGSNIGLYDPTWPGPRTPGSLWYPHIYEKN RWHKVYSPLRMPAPSAVPEMFGDTMLVNGTVFPEATVEARPYRLRILNVCNARFMNLQLYVDDGSLNGVTLNPVTGNPPP SAAFVDGTQNQPAVLQLGTEGGFLPTPVLVPTNVPFGFDPVTGAPTGSILMGPAERVDLIVDFKNYIGKNVILYSDAPAP FPLGDPRNDYFPQWNTAGNPANALTKNGFGPNTRVLMRFKVKAATSSVAAVSINTATDLSAGNDPLPLPGGAPIIGGALQ LPPGVPVRPLTLNEVFDSYGRLLQLLGTNVPTANAFGLGYMDNATEVVNLVNGEKVEIWQIANLTGDTHPIHFHLVNAQL LGRQPFDVVHYNGTPTYIGPARGPDPNETGFKETIRMNPGEVTTVIMRFKFPTVPFTVPNSLNPNLGISGKEYVWHCHIL DHEEHDMMRPLVVI
Sequences:
>Translated_734_residues MNKISRRKFLQISGFAAGATMLPLPMKWLGRRDVFAFYQTPANQLGLFKTKLRGVGPAGIPLATPDGSAGIGGAAHYTFN IGQFTDQLHPALGPTTLWGYNPQNALGVTGVPAQKHLGGIIVANKGVPIQLTFTNNLPNKHILPVDKSANFPDAAQHVND ASVHLHGGFVPWISDGGPMAYFGPPTIANPNGVYGPSVSDGVNPNLFQQVLNSNLDPGQAEYYYPNQQSARMMWYHDHTH DCTRLNAYAGLASVYLIRDTFEGNLRNLGLPDYIENGGFEIPLVIQDKIFVGSNIGLYDPTWPGPRTPGSLWYPHIYEKN RWHKVYSPLRMPAPSAVPEMFGDTMLVNGTVFPEATVEARPYRLRILNVCNARFMNLQLYVDDGSLNGVTLNPVTGNPPP SAAFVDGTQNQPAVLQLGTEGGFLPTPVLVPTNVPFGFDPVTGAPTGSILMGPAERVDLIVDFKNYIGKNVILYSDAPAP FPLGDPRNDYFPQWNTAGNPANALTKNGFGPNTRVLMRFKVKAATSSVAAVSINTATDLSAGNDPLPLPGGAPIIGGALQ LPPGVPVRPLTLNEVFDSYGRLLQLLGTNVPTANAFGLGYMDNATEVVNLVNGEKVEIWQIANLTGDTHPIHFHLVNAQL LGRQPFDVVHYNGTPTYIGPARGPDPNETGFKETIRMNPGEVTTVIMRFKFPTVPFTVPNSLNPNLGISGKEYVWHCHIL DHEEHDMMRPLVVI >Mature_734_residues MNKISRRKFLQISGFAAGATMLPLPMKWLGRRDVFAFYQTPANQLGLFKTKLRGVGPAGIPLATPDGSAGIGGAAHYTFN IGQFTDQLHPALGPTTLWGYNPQNALGVTGVPAQKHLGGIIVANKGVPIQLTFTNNLPNKHILPVDKSANFPDAAQHVND ASVHLHGGFVPWISDGGPMAYFGPPTIANPNGVYGPSVSDGVNPNLFQQVLNSNLDPGQAEYYYPNQQSARMMWYHDHTH DCTRLNAYAGLASVYLIRDTFEGNLRNLGLPDYIENGGFEIPLVIQDKIFVGSNIGLYDPTWPGPRTPGSLWYPHIYEKN RWHKVYSPLRMPAPSAVPEMFGDTMLVNGTVFPEATVEARPYRLRILNVCNARFMNLQLYVDDGSLNGVTLNPVTGNPPP SAAFVDGTQNQPAVLQLGTEGGFLPTPVLVPTNVPFGFDPVTGAPTGSILMGPAERVDLIVDFKNYIGKNVILYSDAPAP FPLGDPRNDYFPQWNTAGNPANALTKNGFGPNTRVLMRFKVKAATSSVAAVSINTATDLSAGNDPLPLPGGAPIIGGALQ LPPGVPVRPLTLNEVFDSYGRLLQLLGTNVPTANAFGLGYMDNATEVVNLVNGEKVEIWQIANLTGDTHPIHFHLVNAQL LGRQPFDVVHYNGTPTYIGPARGPDPNETGFKETIRMNPGEVTTVIMRFKFPTVPFTVPNSLNPNLGISGKEYVWHCHIL DHEEHDMMRPLVVI
Specific function: Involved in brown pigmentation during sporogenesis [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.antibioticus phenoxazinone synthase (phsA) [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR008972 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 79590; Mature: 79590
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKISRRKFLQISGFAAGATMLPLPMKWLGRRDVFAFYQTPANQLGLFKTKLRGVGPAGI CCCCCCCEEEEEECCCCCCEECCCCHHHCCCCCEEEEECCCCHHHCHHHHHHCCCCCCCC PLATPDGSAGIGGAAHYTFNIGQFTDQLHPALGPTTLWGYNPQNALGVTGVPAQKHLGGI EEECCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHCCEE IVANKGVPIQLTFTNNLPNKHILPVDKSANFPDAAQHVNDASVHLHGGFVPWISDGGPMA EEECCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCEEEEECCCCCEE YFGPPTIANPNGVYGPSVSDGVNPNLFQQVLNSNLDPGQAEYYYPNQQSARMMWYHDHTH EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEEECCCC DCTRLNAYAGLASVYLIRDTFEGNLRNLGLPDYIENGGFEIPLVIQDKIFVGSNIGLYDP CCHHHHHHHCCEEEEEEEECCCCCCCCCCCCHHHHCCCEEEEEEEECEEEECCCCCCCCC TWPGPRTPGSLWYPHIYEKNRWHKVYSPLRMPAPSAVPEMFGDTMLVNGTVFPEATVEAR CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCEEEEECEECCCCCCCCC PYRLRILNVCNARFMNLQLYVDDGSLNGVTLNPVTGNPPPSAAFVDGTQNQPAVLQLGTE CEEEEEEEECCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCEEECCCCCCCEEEEECCC GGFLPTPVLVPTNVPFGFDPVTGAPTGSILMGPAERVDLIVDFKNYIGKNVILYSDAPAP CCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCHHHEEEEEEEHHHHCCEEEEECCCCCC FPLGDPRNDYFPQWNTAGNPANALTKNGFGPNTRVLMRFKVKAATSSVAAVSINTATDLS CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCC AGNDPLPLPGGAPIIGGALQLPPGVPVRPLTLNEVFDSYGRLLQLLGTNVPTANAFGLGY CCCCCCCCCCCCCEECCEEECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEECCCC MDNATEVVNLVNGEKVEIWQIANLTGDTHPIHFHLVNAQLLGRQPFDVVHYNGTPTYIGP CCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECHHHHCCCCCEEEEECCCCCEECC ARGPDPNETGFKETIRMNPGEVTTVIMRFKFPTVPFTVPNSLNPNLGISGKEYVWHCHIL CCCCCCCCCCCHHEEECCCCCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEEEEE DHEEHDMMRPLVVI CCCCHHHCCCEEEC >Mature Secondary Structure MNKISRRKFLQISGFAAGATMLPLPMKWLGRRDVFAFYQTPANQLGLFKTKLRGVGPAGI CCCCCCCEEEEEECCCCCCEECCCCHHHCCCCCEEEEECCCCHHHCHHHHHHCCCCCCCC PLATPDGSAGIGGAAHYTFNIGQFTDQLHPALGPTTLWGYNPQNALGVTGVPAQKHLGGI EEECCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHCCEE IVANKGVPIQLTFTNNLPNKHILPVDKSANFPDAAQHVNDASVHLHGGFVPWISDGGPMA EEECCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCEEEEECCCCCEE YFGPPTIANPNGVYGPSVSDGVNPNLFQQVLNSNLDPGQAEYYYPNQQSARMMWYHDHTH EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEEECCCC DCTRLNAYAGLASVYLIRDTFEGNLRNLGLPDYIENGGFEIPLVIQDKIFVGSNIGLYDP CCHHHHHHHCCEEEEEEEECCCCCCCCCCCCHHHHCCCEEEEEEEECEEEECCCCCCCCC TWPGPRTPGSLWYPHIYEKNRWHKVYSPLRMPAPSAVPEMFGDTMLVNGTVFPEATVEAR CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCEEEEECEECCCCCCCCC PYRLRILNVCNARFMNLQLYVDDGSLNGVTLNPVTGNPPPSAAFVDGTQNQPAVLQLGTE CEEEEEEEECCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCEEECCCCCCCEEEEECCC GGFLPTPVLVPTNVPFGFDPVTGAPTGSILMGPAERVDLIVDFKNYIGKNVILYSDAPAP CCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCHHHEEEEEEEHHHHCCEEEEECCCCCC FPLGDPRNDYFPQWNTAGNPANALTKNGFGPNTRVLMRFKVKAATSSVAAVSINTATDLS CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCC AGNDPLPLPGGAPIIGGALQLPPGVPVRPLTLNEVFDSYGRLLQLLGTNVPTANAFGLGY CCCCCCCCCCCCCEECCEEECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEECCCC MDNATEVVNLVNGEKVEIWQIANLTGDTHPIHFHLVNAQLLGRQPFDVVHYNGTPTYIGP CCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECHHHHCCCCCEEEEECCCCCEECC ARGPDPNETGFKETIRMNPGEVTTVIMRFKFPTVPFTVPNSLNPNLGISGKEYVWHCHIL CCCCCCCCCCCHHEEECCCCCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEEEEE DHEEHDMMRPLVVI CCCCHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969499; 9455482; 9384377; 2821284; 3135411 [H]