| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223771
Identifier: 78223771
GI number: 78223771
Start: 2923198
End: 2923938
Strand: Direct
Name: 78223771
Synonym: Gmet_2574
Alternate gene names: NA
Gene position: 2923198-2923938 (Clockwise)
Preceding gene: 78223769
Following gene: 78223773
Centisome position: 73.13
GC content: 62.08
Gene sequence:
>741_bases ATGAACGGCAGAACCTACAAGCTCGTTACCGGCATCATCTCTCTTTTCATCGCCCTCTTCCTGGCATGGCGGATCGGCCT CTGGCTGGAGCCCGAACCGAAGCAGAAAAACCCGGCGCCGGTGGTGCCGTCCCCCGCCGCCAAGGAGCCCCCCTTTGTGA CGGGAACAGTGCGGAAAGATCTCAACTTCGAGGTGCGGAACGTCAGGTTCGGCAACAGGGGGAAAACCGTGGAGGGAATC GGAATCGTCACCTTCGACAGCGATCGGTCGGACCTGAAGGCAGCGGCGGTGGCGATGCTGAAGAAGCTGAAGGAGAAAGT CCCGGCAGCGGAGAGAATCGTCCTGACCCTGAAACCCTCGGTGGACTGCCCCGTTTGTGCCATGGCCGAGGTTACCTGGG ACCGGGGGAAGGTGGATATGCGCTACGGCATCCCCTCCCTGGAGCAGATGGAGGAGGCCAACACCCTCATCGGCACCAAG GATAAAAAGGGTGAAACGGTGGACCGCCCCCGCCTCTACCTCCCCGACAGGGAGACCTTCGCCGCGGGGCTTGCCATCAC CCAGGCCATCGATGCAGCCCGGAAGAAAAACCCCTCACTCGGTGACGACCAGCTCCTGGAGCAGGCGGCCGCGGCCACGG GGCTCAACTACGCAGTTGCCCGGCGCAGCAGAGATTTCATGGCCGCCTACTACACAGCCACCGAATATGGAGAAGAGACC TTCACCCTCTCTCTTCCGTAG
Upstream 100 bases:
>100_bases ATTATGCCGCACATCCCCCTCTACGTTTGCATTTCCAGTCAATCACTGTACCCTTGGAATCAGTACCGCGGCCATCAACT CCCCTGGCAGGTGAATCCCC
Downstream 100 bases:
>100_bases GGGCTGCGACTTTTACGCCATCTCGCCGCCGTCCTGGGATTAACGTGATTTCCCGTCAGAGGCCGGTCAACTCCTCCACC TTCAACTCCAAGTCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNGRTYKLVTGIISLFIALFLAWRIGLWLEPEPKQKNPAPVVPSPAAKEPPFVTGTVRKDLNFEVRNVRFGNRGKTVEGI GIVTFDSDRSDLKAAAVAMLKKLKEKVPAAERIVLTLKPSVDCPVCAMAEVTWDRGKVDMRYGIPSLEQMEEANTLIGTK DKKGETVDRPRLYLPDRETFAAGLAITQAIDAARKKNPSLGDDQLLEQAAAATGLNYAVARRSRDFMAAYYTATEYGEET FTLSLP
Sequences:
>Translated_246_residues MNGRTYKLVTGIISLFIALFLAWRIGLWLEPEPKQKNPAPVVPSPAAKEPPFVTGTVRKDLNFEVRNVRFGNRGKTVEGI GIVTFDSDRSDLKAAAVAMLKKLKEKVPAAERIVLTLKPSVDCPVCAMAEVTWDRGKVDMRYGIPSLEQMEEANTLIGTK DKKGETVDRPRLYLPDRETFAAGLAITQAIDAARKKNPSLGDDQLLEQAAAATGLNYAVARRSRDFMAAYYTATEYGEET FTLSLP >Mature_246_residues MNGRTYKLVTGIISLFIALFLAWRIGLWLEPEPKQKNPAPVVPSPAAKEPPFVTGTVRKDLNFEVRNVRFGNRGKTVEGI GIVTFDSDRSDLKAAAVAMLKKLKEKVPAAERIVLTLKPSVDCPVCAMAEVTWDRGKVDMRYGIPSLEQMEEANTLIGTK DKKGETVDRPRLYLPDRETFAAGLAITQAIDAARKKNPSLGDDQLLEQAAAATGLNYAVARRSRDFMAAYYTATEYGEET FTLSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27123; Mature: 27123
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRTYKLVTGIISLFIALFLAWRIGLWLEPEPKQKNPAPVVPSPAAKEPPFVTGTVRKD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC LNFEVRNVRFGNRGKTVEGIGIVTFDSDRSDLKAAAVAMLKKLKEKVPAAERIVLTLKPS CCEEEEEEEECCCCCEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC VDCPVCAMAEVTWDRGKVDMRYGIPSLEQMEEANTLIGTKDKKGETVDRPRLYLPDRETF CCCCHHHHEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHH AAGLAITQAIDAARKKNPSLGDDQLLEQAAAATGLNYAVARRSRDFMAAYYTATEYGEET HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHEEEHHHHCCCEE FTLSLP EEEECC >Mature Secondary Structure MNGRTYKLVTGIISLFIALFLAWRIGLWLEPEPKQKNPAPVVPSPAAKEPPFVTGTVRKD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC LNFEVRNVRFGNRGKTVEGIGIVTFDSDRSDLKAAAVAMLKKLKEKVPAAERIVLTLKPS CCEEEEEEEECCCCCEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC VDCPVCAMAEVTWDRGKVDMRYGIPSLEQMEEANTLIGTKDKKGETVDRPRLYLPDRETF CCCCHHHHEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHH AAGLAITQAIDAARKKNPSLGDDQLLEQAAAATGLNYAVARRSRDFMAAYYTATEYGEET HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHEEEHHHHCCCEE FTLSLP EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA