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The map label for this gene is yrbE [C]

Identifier: 78223740

GI number: 78223740

Start: 2884957

End: 2885718

Strand: Reverse

Name: yrbE [C]

Synonym: Gmet_2543

Alternate gene names: 78223740

Gene position: 2885718-2884957 (Counterclockwise)

Preceding gene: 78223741

Following gene: 78223739

Centisome position: 72.19

GC content: 61.94

Gene sequence:

>762_bases
ATGAACCCAGAGCGCACGGTCAAATGGTTTCTCCAGGAATTGCAGGCGTTCTTCGTCCTTTCGGCCAGGGCCGTCGTACG
GATTTTCCGCAGGCCCTGGTACTATCGGGAGTTCATCACCCAACTGGACAAGATGGGGGTCGGCTCCCTTTTTATCGTCT
GCCTCACGGGGCTCTTCACCGGCATGGTCATGGCGCTCCAGGCCCTCATCCAGCTGAAGCCCTTCGCCGCCACCAGCTAC
GTGGGGGGGATGGTGGCGGTCACCATGGTGAAGGAGTTGGGGCCGGTCCTCTCCTCCCTCATGGTGGCAGGGCGGGTCGG
CTCGTCCATTACTGCCGAGCTGGGCACCATGGTCGTCACCGAGCAGGTGGACGCCATGCGGGTGGAGGGGACCGACATCA
TCACACGGCTCGTCACCTCGCGGCTCAAGGCAATGCTCGTGGCCATGCCGCTTCTGGCCGTCGTTACCGACGCCCTGGCG
CTCCTGGGGGGATACGTCATCGCCTCCGGCTACGACATCAACCTGCTCATGTACTGGAAATCCCTCTCCCAGTTCATGGT
CTTCCAGGATCTCGTCGAAGGGGTGGCGAAACCCTTTGTCTTCGGCTTTCTCATCGCCATGATCGGCTCGTACGCGGGGC
TCACCACCAGCGGCGGGGCCGAGGGGGTGGGGGCCGCGGCCAAGCGGGCGGTGGTCGTCTCGTCCATCATGGTGCTCGTC
TGCGATTTCTTTATGACGAAGATTTTCATAGTTTTCAGGTGA

Upstream 100 bases:

>100_bases
GGGAGAACCTGGAGGACATCCCCGACGACGTGAAGGGGGAGATCGCCTTCGTCTTTGTGGATGACGTGCGCGAGGCGGTT
CAGGTGGTGCTGCAACCGGT

Downstream 100 bases:

>100_bases
TCGAGTGACTGTCGAACGTGGCATACGGATGGACCAGGTTTCCTACGCGGTGGGGGGACGCACGATCCTCGACCGCTTCG
ACCTCTTTCTGGAGCCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNPERTVKWFLQELQAFFVLSARAVVRIFRRPWYYREFITQLDKMGVGSLFIVCLTGLFTGMVMALQALIQLKPFAATSY
VGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIITRLVTSRLKAMLVAMPLLAVVTDALA
LLGGYVIASGYDINLLMYWKSLSQFMVFQDLVEGVAKPFVFGFLIAMIGSYAGLTTSGGAEGVGAAAKRAVVVSSIMVLV
CDFFMTKIFIVFR

Sequences:

>Translated_253_residues
MNPERTVKWFLQELQAFFVLSARAVVRIFRRPWYYREFITQLDKMGVGSLFIVCLTGLFTGMVMALQALIQLKPFAATSY
VGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIITRLVTSRLKAMLVAMPLLAVVTDALA
LLGGYVIASGYDINLLMYWKSLSQFMVFQDLVEGVAKPFVFGFLIAMIGSYAGLTTSGGAEGVGAAAKRAVVVSSIMVLV
CDFFMTKIFIVFR
>Mature_253_residues
MNPERTVKWFLQELQAFFVLSARAVVRIFRRPWYYREFITQLDKMGVGSLFIVCLTGLFTGMVMALQALIQLKPFAATSY
VGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIITRLVTSRLKAMLVAMPLLAVVTDALA
LLGGYVIASGYDINLLMYWKSLSQFMVFQDLVEGVAKPFVFGFLIAMIGSYAGLTTSGGAEGVGAAAKRAVVVSSIMVLV
CDFFMTKIFIVFR

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=223, Percent_Identity=32.2869955156951, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27550; Mature: 27550

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA