| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223722
Identifier: 78223722
GI number: 78223722
Start: 2866861
End: 2867229
Strand: Direct
Name: 78223722
Synonym: Gmet_2523
Alternate gene names: NA
Gene position: 2866861-2867229 (Clockwise)
Preceding gene: 78223721
Following gene: 78223723
Centisome position: 71.72
GC content: 56.64
Gene sequence:
>369_bases ATGGATGTGACTGAGCAGAGGCATTTCCAGAGGGTACCATTCACCACGGAATCCACCATTGAATTTGGAGGGAAGCAGCA CGGGGCCGAGGTGGTCGACATCTGCCTCAAAGGCGCGCTGCTCAAGCTTTCCGGGCCTCCGCAATGCAGGCGTGGCGATG CCTGTACCGTCTCCTTCGTCCTCGTCAACTCGGATATCGTCGTCCACTTCGAGGCAGAGGTTGCCCACCTCCGTGACCAG TTCCTCGGTGTCAAACTTCTGAAAATTGACATTGACTCCATGATCCACCTGCGCAATATCGTGGAGCTCAACACCGCCGA TCCCGACCAGGTCCGCAAGGAACTCTCCTTTCTCTACCGCGAGGAATGA
Upstream 100 bases:
>100_bases CTCCTCCGGAGGCATCGCCTTTTTTCATCTCTTCTGTTGCAAAGGCATCAACTGTGCATTACAACCATTCATGAAATGAC ATGTTCGTAGGGGGTGAGGG
Downstream 100 bases:
>100_bases TCCGGGTTTCCGTCACCCGCTTCCCCTCCTTGACGAAATTTAAGTTGCTCCCCCGGTGCTCCCGTGCTAACAGCTTCTCC TTTCCATTTCACGCACGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MDVTEQRHFQRVPFTTESTIEFGGKQHGAEVVDICLKGALLKLSGPPQCRRGDACTVSFVLVNSDIVVHFEAEVAHLRDQ FLGVKLLKIDIDSMIHLRNIVELNTADPDQVRKELSFLYREE
Sequences:
>Translated_122_residues MDVTEQRHFQRVPFTTESTIEFGGKQHGAEVVDICLKGALLKLSGPPQCRRGDACTVSFVLVNSDIVVHFEAEVAHLRDQ FLGVKLLKIDIDSMIHLRNIVELNTADPDQVRKELSFLYREE >Mature_122_residues MDVTEQRHFQRVPFTTESTIEFGGKQHGAEVVDICLKGALLKLSGPPQCRRGDACTVSFVLVNSDIVVHFEAEVAHLRDQ FLGVKLLKIDIDSMIHLRNIVELNTADPDQVRKELSFLYREE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13821; Mature: 13821
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVTEQRHFQRVPFTTESTIEFGGKQHGAEVVDICLKGALLKLSGPPQCRRGDACTVSFV CCCCCCCCEEECCCCCCCHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEE LVNSDIVVHFEAEVAHLRDQFLGVKLLKIDIDSMIHLRNIVELNTADPDQVRKELSFLYR EECCCEEEEEHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHEECCCCCHHHHHHHHHHHHC EE CC >Mature Secondary Structure MDVTEQRHFQRVPFTTESTIEFGGKQHGAEVVDICLKGALLKLSGPPQCRRGDACTVSFV CCCCCCCCEEECCCCCCCHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEE LVNSDIVVHFEAEVAHLRDQFLGVKLLKIDIDSMIHLRNIVELNTADPDQVRKELSFLYR EECCCEEEEEHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHEECCCCCHHHHHHHHHHHHC EE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA