Click here to switch to the map view.

The map label for this gene is yjjK [H]

Identifier: 78223682

GI number: 78223682

Start: 2820909

End: 2822813

Strand: Reverse

Name: yjjK [H]

Synonym: Gmet_2479

Alternate gene names: 78223682

Gene position: 2822813-2820909 (Counterclockwise)

Preceding gene: 78223683

Following gene: 78223681

Centisome position: 70.62

GC content: 65.72

Gene sequence:

>1905_bases
ATGAATGTCATCGATGTTGTCGGGCTCGCCAAGAGTTTCGGCTCCCGCACGGTTCTCGACGGTGTCACCTTTGCCGTGGG
CGAGGAGGAGAAGGTCGGCCTCATCGGCGTCAACGGCTGCGGCAAGTCGACCCTCATGCAGATCCTTGCGGGGCTTGAGG
AGCGGGACGGCGGCACCATCATGACCCGTCGCGGCGCGTCCATCGGCTACCTCTCCCAGGAGCCGCTCCTTGACGACGGG
CTCACCATCGGCGAGGAGATTGAGCAAGGTCTCGTGGAGATCCGGCGGGTCATGACCGAGTACGAGGGGGTGACGGCACA
GCTTGCCGAGCCGTCGCCGGACCACGACCGGCTCCTGGAGCGCCAGGGAGAGCTGACCTCCTGGATAGAACACCATGGCG
GCTGGAACACCGACCACCGGGTGGCGGAGATCATGACCCACCTGGGAATCCCCGACCGGAACCGGCGTCTCGGCGAGCTC
TCCGGCGGGACGAAGCGGCGGGTGGCCCTGGGGCGCCTCCTCCTCCAGGCCCCGGACCTCCTCCTTCTGGACGAGCCCAC
CAACCACCTGGACGCCGACACGGTCCAGTGGCTTCAGGAGCACCTTATGGCCTATTCCGGCGCGGTGCTCCTCATAACCC
ACGACCGCTACTTCCTCGACCAGGTGGTGGGGAGGATGCTGGACCTGGAGCGGGGCCTGATTACTGCATACAGCGGCGGT
TACTCCAGCTACCTCATCCAGCGGGAGGAGCGGCTGGCCCGGGAGGCCCGGGGGCACGACCGGCTCCTGAATCTCCTCCG
GAACGAGACCGCCTGGATGCGGCGGGGCCCCAAGGCCCGCACCACCAAGCAGAAGGCCCGCATCGACCGGTTCCACGACC
TTGAGGCCCGTGCACAGGTGGAGACGACCCGGGAGACCACCATCGCCTTCACCCCCGGTGATGGTCTGGGTGGCACCATC
ATGGAGCTCCAGGGGGTGCGGAAGTCCCTGGGGGGACAGCTCCTGGTGGACGACCTCACCTTCCTCATGAAGCGCGGCGA
CCGGGTCGGGATCATTGGCCCCAACGGCTGCGGCAAGACCACCCTCATGCGGATGATCATGGGGGAAGAGCCGCCCGATG
GCGGGACGGTGGTAATCGGTGCCAAGACCCGCATCGCCTACTTTGACCAGAACCGGGAAATCCTCGATCCGTCACTGACC
CTCTATGATTTCCTCGGCGAGGGGGATTACGTGACGGTGGGGGGGGAGCGGCGCCACAAGATTGGCTACCTGGAGGAGTT
CCTCTTTCCGCCGTCCGACCGGATGCGGCGGATCGCCACCCTCTCCGGCGGCGAGAAGAGCCGCCTCATCCTGGCGCGCC
TCATGCTGGCGGACGCCAACCTCCTCGTCCTGGACGAGCCCACCAACGACCTCGACATCCCGACGCTGCAGCTTCTGGAC
GATGCCCTGACCCGCTTTCCCGGCTGTATCCTCATGGTGACCCACGATCGCTTTTTCCTCGATAAGGTGGCAACGGGCAT
CCTCTCCTTCGAGGGAGAGGGGAGGACCGTCTTCTACGAAGGGAACTACACCCTCTACCGGGAGCTGAGAGCGCAAAATC
TGAAAGAAGAGAATAAGGGCGGGAGTGGCAGGCCCGTTGCGGCACCTCCTGCGGTACGCGAACGGCCCCGCAAGAAGGGG
CTCACCTTTGCCGAAAGGCAGGAGCTCGAGCGGGTCGAGGCGGAGATCGCCCACCTGGAGCTCCGGACGGCGGAGGTGGA
AGCCGCCCTGGCGGATCCTGCCGCCTATGCTGGGGCGCCGGGGGGGATAGCGGCCCTTTCCACGGAATTCGCCCATATGG
GAGAGAAACTGGAGGAACTTCTCCTTCGCTGGGAAGAGCTCGAAACCAAGCGGTCGGAGGCGTAG

Upstream 100 bases:

>100_bases
CGGTGCCGGTGAGCAAGGAGAGTGTGTTTGCCGTGCCGGAGCGCTACCGTACTTCCGGTATTCTCAAGGGTGTCACCGAC
TTGCTGAAAGGTTTCCGGCA

Downstream 100 bases:

>100_bases
GCCCGGCAGCTCGGGAAACCGCGTCGGTAGCCTCTTTTCGCTTGAAAAATCAGACCTTGGCTGTTATATCAAGACCAGTT
GATTATTAAATTTTTCATGC

Product: ABC transporter-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MNVIDVVGLAKSFGSRTVLDGVTFAVGEEEKVGLIGVNGCGKSTLMQILAGLEERDGGTIMTRRGASIGYLSQEPLLDDG
LTIGEEIEQGLVEIRRVMTEYEGVTAQLAEPSPDHDRLLERQGELTSWIEHHGGWNTDHRVAEIMTHLGIPDRNRRLGEL
SGGTKRRVALGRLLLQAPDLLLLDEPTNHLDADTVQWLQEHLMAYSGAVLLITHDRYFLDQVVGRMLDLERGLITAYSGG
YSSYLIQREERLAREARGHDRLLNLLRNETAWMRRGPKARTTKQKARIDRFHDLEARAQVETTRETTIAFTPGDGLGGTI
MELQGVRKSLGGQLLVDDLTFLMKRGDRVGIIGPNGCGKTTLMRMIMGEEPPDGGTVVIGAKTRIAYFDQNREILDPSLT
LYDFLGEGDYVTVGGERRHKIGYLEEFLFPPSDRMRRIATLSGGEKSRLILARLMLADANLLVLDEPTNDLDIPTLQLLD
DALTRFPGCILMVTHDRFFLDKVATGILSFEGEGRTVFYEGNYTLYRELRAQNLKEENKGGSGRPVAAPPAVRERPRKKG
LTFAERQELERVEAEIAHLELRTAEVEAALADPAAYAGAPGGIAALSTEFAHMGEKLEELLLRWEELETKRSEA

Sequences:

>Translated_634_residues
MNVIDVVGLAKSFGSRTVLDGVTFAVGEEEKVGLIGVNGCGKSTLMQILAGLEERDGGTIMTRRGASIGYLSQEPLLDDG
LTIGEEIEQGLVEIRRVMTEYEGVTAQLAEPSPDHDRLLERQGELTSWIEHHGGWNTDHRVAEIMTHLGIPDRNRRLGEL
SGGTKRRVALGRLLLQAPDLLLLDEPTNHLDADTVQWLQEHLMAYSGAVLLITHDRYFLDQVVGRMLDLERGLITAYSGG
YSSYLIQREERLAREARGHDRLLNLLRNETAWMRRGPKARTTKQKARIDRFHDLEARAQVETTRETTIAFTPGDGLGGTI
MELQGVRKSLGGQLLVDDLTFLMKRGDRVGIIGPNGCGKTTLMRMIMGEEPPDGGTVVIGAKTRIAYFDQNREILDPSLT
LYDFLGEGDYVTVGGERRHKIGYLEEFLFPPSDRMRRIATLSGGEKSRLILARLMLADANLLVLDEPTNDLDIPTLQLLD
DALTRFPGCILMVTHDRFFLDKVATGILSFEGEGRTVFYEGNYTLYRELRAQNLKEENKGGSGRPVAAPPAVRERPRKKG
LTFAERQELERVEAEIAHLELRTAEVEAALADPAAYAGAPGGIAALSTEFAHMGEKLEELLLRWEELETKRSEA
>Mature_634_residues
MNVIDVVGLAKSFGSRTVLDGVTFAVGEEEKVGLIGVNGCGKSTLMQILAGLEERDGGTIMTRRGASIGYLSQEPLLDDG
LTIGEEIEQGLVEIRRVMTEYEGVTAQLAEPSPDHDRLLERQGELTSWIEHHGGWNTDHRVAEIMTHLGIPDRNRRLGEL
SGGTKRRVALGRLLLQAPDLLLLDEPTNHLDADTVQWLQEHLMAYSGAVLLITHDRYFLDQVVGRMLDLERGLITAYSGG
YSSYLIQREERLAREARGHDRLLNLLRNETAWMRRGPKARTTKQKARIDRFHDLEARAQVETTRETTIAFTPGDGLGGTI
MELQGVRKSLGGQLLVDDLTFLMKRGDRVGIIGPNGCGKTTLMRMIMGEEPPDGGTVVIGAKTRIAYFDQNREILDPSLT
LYDFLGEGDYVTVGGERRHKIGYLEEFLFPPSDRMRRIATLSGGEKSRLILARLMLADANLLVLDEPTNDLDIPTLQLLD
DALTRFPGCILMVTHDRFFLDKVATGILSFEGEGRTVFYEGNYTLYRELRAQNLKEENKGGSGRPVAAPPAVRERPRKKG
LTFAERQELERVEAEIAHLELRTAEVEAALADPAAYAGAPGGIAALSTEFAHMGEKLEELLLRWEELETKRSEA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=533, Percent_Identity=28.3302063789869, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI10947137, Length=548, Percent_Identity=27.3722627737226, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI27881506, Length=547, Percent_Identity=27.2394881170018, Blast_Score=178, Evalue=2e-44,
Organism=Homo sapiens, GI10947135, Length=490, Percent_Identity=27.7551020408163, Blast_Score=149, Evalue=9e-36,
Organism=Homo sapiens, GI69354671, Length=490, Percent_Identity=27.7551020408163, Blast_Score=149, Evalue=9e-36,
Organism=Homo sapiens, GI255708477, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI157502203, Length=247, Percent_Identity=27.1255060728745, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI157502201, Length=245, Percent_Identity=27.3469387755102, Blast_Score=70, Evalue=7e-12,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=42.6103646833013, Blast_Score=435, Evalue=1e-123,
Organism=Escherichia coli, GI1787182, Length=647, Percent_Identity=34.7758887171561, Blast_Score=368, Evalue=1e-103,
Organism=Escherichia coli, GI1787041, Length=525, Percent_Identity=31.2380952380952, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1789751, Length=644, Percent_Identity=29.6583850931677, Blast_Score=251, Evalue=1e-67,
Organism=Escherichia coli, GI1788506, Length=531, Percent_Identity=23.728813559322, Blast_Score=94, Evalue=4e-20,
Organism=Escherichia coli, GI87081782, Length=495, Percent_Identity=26.4646464646465, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1788165, Length=189, Percent_Identity=34.9206349206349, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788225, Length=248, Percent_Identity=26.2096774193548, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=26.9430051813472, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1789672, Length=253, Percent_Identity=26.0869565217391, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081791, Length=221, Percent_Identity=27.1493212669683, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=144, Percent_Identity=28.4722222222222, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790467, Length=162, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1787370, Length=192, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1788761, Length=166, Percent_Identity=30.7228915662651, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787712, Length=192, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=28.9473684210526, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787029, Length=244, Percent_Identity=27.4590163934426, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787164, Length=194, Percent_Identity=30.4123711340206, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87082267, Length=208, Percent_Identity=27.8846153846154, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=531, Percent_Identity=25.9887005649718, Blast_Score=178, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI17553372, Length=508, Percent_Identity=29.3307086614173, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17555318, Length=547, Percent_Identity=26.1425959780622, Blast_Score=168, Evalue=9e-42,
Organism=Caenorhabditis elegans, GI193202349, Length=237, Percent_Identity=27.4261603375527, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=563, Percent_Identity=28.2415630550622, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6320874, Length=522, Percent_Identity=29.3103448275862, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=27.5064267352185, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=387, Percent_Identity=25.5813953488372, Blast_Score=114, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=382, Percent_Identity=25.130890052356, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24666836, Length=510, Percent_Identity=29.2156862745098, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24642252, Length=558, Percent_Identity=26.1648745519713, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI18859989, Length=558, Percent_Identity=26.1648745519713, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24641342, Length=501, Percent_Identity=26.1477045908184, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24582014, Length=153, Percent_Identity=33.9869281045752, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24582012, Length=153, Percent_Identity=33.9869281045752, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70448; Mature: 70448

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIDVVGLAKSFGSRTVLDGVTFAVGEEEKVGLIGVNGCGKSTLMQILAGLEERDGGTI
CCHHHHHHHHHHCCCCCHHCCEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEE
MTRRGASIGYLSQEPLLDDGLTIGEEIEQGLVEIRRVMTEYEGVTAQLAEPSPDHDRLLE
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
RQGELTSWIEHHGGWNTDHRVAEIMTHLGIPDRNRRLGELSGGTKRRVALGRLLLQAPDL
HCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE
LLLDEPTNHLDADTVQWLQEHLMAYSGAVLLITHDRYFLDQVVGRMLDLERGLITAYSGG
EEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCC
YSSYLIQREERLAREARGHDRLLNLLRNETAWMRRGPKARTTKQKARIDRFHDLEARAQV
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHH
ETTRETTIAFTPGDGLGGTIMELQGVRKSLGGQLLVDDLTFLMKRGDRVGIIGPNGCGKT
EECCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCEEEEECCCCCCHH
TLMRMIMGEEPPDGGTVVIGAKTRIAYFDQNREILDPSLTLYDFLGEGDYVTVGGERRHK
HHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCCCHH
IGYLEEFLFPPSDRMRRIATLSGGEKSRLILARLMLADANLLVLDEPTNDLDIPTLQLLD
HHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH
DALTRFPGCILMVTHDRFFLDKVATGILSFEGEGRTVFYEGNYTLYRELRAQNLKEENKG
HHHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHCHHHCCC
GSGRPVAAPPAVRERPRKKGLTFAERQELERVEAEIAHLELRTAEVEAALADPAAYAGAP
CCCCCCCCCCHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHCCCC
GGIAALSTEFAHMGEKLEELLLRWEELETKRSEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVIDVVGLAKSFGSRTVLDGVTFAVGEEEKVGLIGVNGCGKSTLMQILAGLEERDGGTI
CCHHHHHHHHHHCCCCCHHCCEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEE
MTRRGASIGYLSQEPLLDDGLTIGEEIEQGLVEIRRVMTEYEGVTAQLAEPSPDHDRLLE
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
RQGELTSWIEHHGGWNTDHRVAEIMTHLGIPDRNRRLGELSGGTKRRVALGRLLLQAPDL
HCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE
LLLDEPTNHLDADTVQWLQEHLMAYSGAVLLITHDRYFLDQVVGRMLDLERGLITAYSGG
EEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCC
YSSYLIQREERLAREARGHDRLLNLLRNETAWMRRGPKARTTKQKARIDRFHDLEARAQV
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHH
ETTRETTIAFTPGDGLGGTIMELQGVRKSLGGQLLVDDLTFLMKRGDRVGIIGPNGCGKT
EECCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCEEEEECCCCCCHH
TLMRMIMGEEPPDGGTVVIGAKTRIAYFDQNREILDPSLTLYDFLGEGDYVTVGGERRHK
HHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCCCHH
IGYLEEFLFPPSDRMRRIATLSGGEKSRLILARLMLADANLLVLDEPTNDLDIPTLQLLD
HHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH
DALTRFPGCILMVTHDRFFLDKVATGILSFEGEGRTVFYEGNYTLYRELRAQNLKEENKG
HHHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHCHHHCCC
GSGRPVAAPPAVRERPRKKGLTFAERQELERVEAEIAHLELRTAEVEAALADPAAYAGAP
CCCCCCCCCCHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHCCCC
GGIAALSTEFAHMGEKLEELLLRWEELETKRSEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]