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The map label for this gene is ynhG [H]

Identifier: 78223666

GI number: 78223666

Start: 2787216

End: 2788097

Strand: Reverse

Name: ynhG [H]

Synonym: Gmet_2463

Alternate gene names: 78223666

Gene position: 2788097-2787216 (Counterclockwise)

Preceding gene: 78223671

Following gene: 78223665

Centisome position: 69.75

GC content: 56.24

Gene sequence:

>882_bases
ATGCGCTCCGTGGAGAGGGGGGAACCGGCCGAAGCGACCGAAACCGCCAGACCACGGTCTTCTGTGATCATCGGCAAGAG
ATTCTCCTACACTGTTGGCAAGGGTGAAAGCCTGCGCTATATCGGCGCTAAATTCGGGGTCAGCTGGCGGCGGCTGGCGC
AGCTCAACCGGATCGACCCCCAGAAACCCCTCAGGGCCGGACAGGTGCTGCGTGTCGACACCCGCCGGATTGTCCCCCGC
CAGATCGACGACGGCATTGTCATAAACATCCCTGATCGCACTCTCTACTATTTCCGTAACGGAGAGGTTGACCGGGTGCT
TTCTGTCGCCGTGGGAAAACCGAAACCGGTAAATGATCCCGAAAAGCGCGACTGGCATACGCCGACCGGCAATTTTCGGA
TCATCGGAAAGGTGAAGGATCCCACCTGGCGTGTCCCCCCCTCCATCCGGAAGGAGATGAAGGAGCGGGGGAAGGAGGTG
AAAACCATTGTCCCGCCGGGGAAGAAAAACCCTCTCGGGAAATACGCCCTGAAAACGTCGATACCAGGAATTCTTATCCA
CAGCACTAACGCGCCCGAATCGGTCTACAGTTTCAGCAGCCATGGCTGCATCAGGGTTTTTCCCGAATTCATGGAGGATT
TCTTCAATTCCGTGACAGAGGAGACCACCGGAGAGATTATTTACGAGCCGGTAAAGATGACGGTTGCCGAGGGACAGGTG
TTCCTTGAAGTGCACCGGGACATTTACAACCGCTACGAGAATCTCGATGAACAGGTGAAGAGCATCGCGCAGGAGCAGCA
CGTCGAGGAGAGAATAGACTGGAACAAGGTCCAACAGGTTCTGAAGAGGATGAACGGGGTACCCGAAAGGGTTTCGTTCT
GA

Upstream 100 bases:

>100_bases
CCCTGCTCCTGCAAGCCCGGCTATGGCCCCTCCCACCGAGCATCTCCATCCCCAATCGGCGCCTGCGCCTGTTGAGCCGG
CCGAACCGCAGCCCGGTGAA

Downstream 100 bases:

>100_bases
TTTCCGCAGGGGCGTCATCGTTGCCGGCTGTTTTTGTCCATGCGGCGTATCCTTTTTATATGCACCAGGTACCGATGGGT
AATATTCTGTAATATCAGTA

Product: peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRSVERGEPAEATETARPRSSVIIGKRFSYTVGKGESLRYIGAKFGVSWRRLAQLNRIDPQKPLRAGQVLRVDTRRIVPR
QIDDGIVINIPDRTLYYFRNGEVDRVLSVAVGKPKPVNDPEKRDWHTPTGNFRIIGKVKDPTWRVPPSIRKEMKERGKEV
KTIVPPGKKNPLGKYALKTSIPGILIHSTNAPESVYSFSSHGCIRVFPEFMEDFFNSVTEETTGEIIYEPVKMTVAEGQV
FLEVHRDIYNRYENLDEQVKSIAQEQHVEERIDWNKVQQVLKRMNGVPERVSF

Sequences:

>Translated_293_residues
MRSVERGEPAEATETARPRSSVIIGKRFSYTVGKGESLRYIGAKFGVSWRRLAQLNRIDPQKPLRAGQVLRVDTRRIVPR
QIDDGIVINIPDRTLYYFRNGEVDRVLSVAVGKPKPVNDPEKRDWHTPTGNFRIIGKVKDPTWRVPPSIRKEMKERGKEV
KTIVPPGKKNPLGKYALKTSIPGILIHSTNAPESVYSFSSHGCIRVFPEFMEDFFNSVTEETTGEIIYEPVKMTVAEGQV
FLEVHRDIYNRYENLDEQVKSIAQEQHVEERIDWNKVQQVLKRMNGVPERVSF
>Mature_293_residues
MRSVERGEPAEATETARPRSSVIIGKRFSYTVGKGESLRYIGAKFGVSWRRLAQLNRIDPQKPLRAGQVLRVDTRRIVPR
QIDDGIVINIPDRTLYYFRNGEVDRVLSVAVGKPKPVNDPEKRDWHTPTGNFRIIGKVKDPTWRVPPSIRKEMKERGKEV
KTIVPPGKKNPLGKYALKTSIPGILIHSTNAPESVYSFSSHGCIRVFPEFMEDFFNSVTEETTGEIIYEPVKMTVAEGQV
FLEVHRDIYNRYENLDEQVKSIAQEQHVEERIDWNKVQQVLKRMNGVPERVSF

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=284, Percent_Identity=28.8732394366197, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1787356, Length=284, Percent_Identity=30.2816901408451, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788299, Length=287, Percent_Identity=27.5261324041812, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1787040, Length=289, Percent_Identity=28.719723183391, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 33629; Mature: 33629

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00974 MANNITOL_DHGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVERGEPAEATETARPRSSVIIGKRFSYTVGKGESLRYIGAKFGVSWRRLAQLNRIDP
CCCCCCCCCCCHHHCCCCCCCEEEECCEEEECCCCCCEEEEHHHHCCHHHHHHHHHCCCC
QKPLRAGQVLRVDTRRIVPRQIDDGIVINIPDRTLYYFRNGEVDRVLSVAVGKPKPVNDP
CCCCCCCCEEEEHHHHCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHCCCCCCCCCC
EKRDWHTPTGNFRIIGKVKDPTWRVPPSIRKEMKERGKEVKTIVPPGKKNPLGKYALKTS
CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHC
IPGILIHSTNAPESVYSFSSHGCIRVFPEFMEDFFNSVTEETTGEIIYEPVKMTVAEGQV
CCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHEEEECCCHH
FLEVHRDIYNRYENLDEQVKSIAQEQHVEERIDWNKVQQVLKRMNGVPERVSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MRSVERGEPAEATETARPRSSVIIGKRFSYTVGKGESLRYIGAKFGVSWRRLAQLNRIDP
CCCCCCCCCCCHHHCCCCCCCEEEECCEEEECCCCCCEEEEHHHHCCHHHHHHHHHCCCC
QKPLRAGQVLRVDTRRIVPRQIDDGIVINIPDRTLYYFRNGEVDRVLSVAVGKPKPVNDP
CCCCCCCCEEEEHHHHCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHCCCCCCCCCC
EKRDWHTPTGNFRIIGKVKDPTWRVPPSIRKEMKERGKEVKTIVPPGKKNPLGKYALKTS
CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHC
IPGILIHSTNAPESVYSFSSHGCIRVFPEFMEDFFNSVTEETTGEIIYEPVKMTVAEGQV
CCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHEEEECCCHH
FLEVHRDIYNRYENLDEQVKSIAQEQHVEERIDWNKVQQVLKRMNGVPERVSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]