| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223651
Identifier: 78223651
GI number: 78223651
Start: 2772278
End: 2773450
Strand: Reverse
Name: 78223651
Synonym: Gmet_2448
Alternate gene names: NA
Gene position: 2773450-2772278 (Counterclockwise)
Preceding gene: 78223652
Following gene: 78223650
Centisome position: 69.38
GC content: 59.76
Gene sequence:
>1173_bases ATGCCAAAACAGACCGGAAACGCAAGGAATCCCTTTGTCCTTCTAGCGCTCTTCATCCTGGTGTGCAGCGGCGGCTGCGC GACATACCCCATCAGTCACGATAAGGCCGTGCCGGTGGCGCGAGGGGCGCTGTTCGAGTACCCGTATTTTCACGATCAGG TAACGGGGATCGCGGTTTCCGGCCAAGGGAGGATTTTTGTGAATTTCCCCCGATGGGACAAGGATCCTCTCTATTCCGTG GCCGAGGTGCTCCCCGACGGGTCGCTCCGCCCCTATCCCGATCATGGCTGGAACCGGTGGGGGGCCGATGAAACGGCCCA TCCGGAGGCGCACTTCATCTGCGTGCAGAGCGTTTTTGTTGATCACAGCGACTTTCTCTGGATTCTCGACCCCGCATCCC CTGCCTTCAATGGGGTGGTACCGGGCGGAGCGAAGCTTGTGAAGGTCAACCTGAAGACCGACCAGGTCGAGCGGGTAATC CCCTTCGCCCCTTCGGCGGCACCCCATGAAAGCTACCTGAACGACGTGCGGATCGACCCTGAGGGCAACTTCGCCTTTAT CACCGATTCGGGGAAAGGCGCCATCGTCGTGGTCGACCTGGAGAGCGGCAAGGCCCGAAGGCTCCTCTCCGGTCACCCTT CAACCAAGGCGGAGCCAGGTTACGTGCCCGTGATCGAAGGGAAGGAGTTGCGGAACGAAGATGGCACGGTGCCCAAGATC CACGCCGACGGAATCGCCCTCGACAGCCGGGGGGAGTACCTCTACTACCACGCTCTGGTTGGCCGTACCCTCTATCGCAT CAGGACTTCCTTCCTGAAAGACCCGTCGCTGCCTGAGAAGGATCTGGAGAACCACGTGGAGCGGATAGCGGAAACGGGAG CCGCGGACGGGATGCTCATGGATGCCCAGGACAACCTCTACCTGACCGCCCTGGAAGAGAACGCCGTCAAGCGGTACCGG CCGTCGGAACCGACCCTGAATACCATTATCCAGGGTGGCTTGCACTGGCCGGACTCCCTGGCCATCTCTCCCGATAACTA CCTCTACGTTACCGATTCACAGATAAACCTGGCGCCCCGCTTCAATCACGGAAAGGATCTGCGGATCATCCCCTACAAGT TTTTTAAGACGTGGCTTATGCCGTTTTCACATGATGGGTTGCTTCCCCCGTGA
Upstream 100 bases:
>100_bases CGATGAGGGATCATTTGACTTGCCTGAAATCAGGGCTATACATTGAATTGCGCTGTTCATGCTGCTCCAGCAAGTCTGGA TGGTAAAAGAGGGAGAAACC
Downstream 100 bases:
>100_bases TACGGGAGGTGTGGCAGTACCTTTGTGCCGGGGAAAATCATCAGGTATGTCTGAATGGGGTTGATTGATGTCCCTTCAAG AGCCCTCAAAGGAAGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Gluconolactonase; Royal Jelly-Like Protein; Glyoxalase/Bleomycin Resistance Protein/Dioxygenase; Royal Jelly-Like Exported Protein; SMP-30/Gluconolactonase/LRE Family Protein; Yellow-Related Protein
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MPKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVSGQGRIFVNFPRWDKDPLYSV AEVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFVDHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVI PFAPSAAPHESYLNDVRIDPEGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKI HADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLMDAQDNLYLTALEENAVKRYR PSEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPRFNHGKDLRIIPYKFFKTWLMPFSHDGLLPP
Sequences:
>Translated_390_residues MPKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVSGQGRIFVNFPRWDKDPLYSV AEVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFVDHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVI PFAPSAAPHESYLNDVRIDPEGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKI HADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLMDAQDNLYLTALEENAVKRYR PSEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPRFNHGKDLRIIPYKFFKTWLMPFSHDGLLPP >Mature_389_residues PKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVSGQGRIFVNFPRWDKDPLYSVA EVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFVDHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVIP FAPSAAPHESYLNDVRIDPEGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKIH ADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLMDAQDNLYLTALEENAVKRYRP SEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPRFNHGKDLRIIPYKFFKTWLMPFSHDGLLPP
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43270; Mature: 43139
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVS CCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCCCEECCCCCCCCEEEEEEC GQGRIFVNFPRWDKDPLYSVAEVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFV CCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHEEE DHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVIPFAPSAAPHESYLNDVRIDP CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHCEEECC EGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKI CCCEEEEEECCCCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCCEE HADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLM ECCCEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEE DAQDNLYLTALEENAVKRYRPSEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPR ECCCCEEEEEECCCHHHHCCCCCCCHHHHHHCCCCCCCCEEECCCCEEEEECCEEEEEEC FNHGKDLRIIPYKFFKTWLMPFSHDGLLPP CCCCCCEEEEHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVS CCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCCCEECCCCCCCCEEEEEEC GQGRIFVNFPRWDKDPLYSVAEVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFV CCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHEEE DHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVIPFAPSAAPHESYLNDVRIDP CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHCEEECC EGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKI CCCEEEEEECCCCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCCEE HADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLM ECCCEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEE DAQDNLYLTALEENAVKRYRPSEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPR ECCCCEEEEEECCCHHHHCCCCCCCHHHHHHCCCCCCCCEEECCCCEEEEECCEEEEEEC FNHGKDLRIIPYKFFKTWLMPFSHDGLLPP CCCCCCEEEEHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA