Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78223651

Identifier: 78223651

GI number: 78223651

Start: 2772278

End: 2773450

Strand: Reverse

Name: 78223651

Synonym: Gmet_2448

Alternate gene names: NA

Gene position: 2773450-2772278 (Counterclockwise)

Preceding gene: 78223652

Following gene: 78223650

Centisome position: 69.38

GC content: 59.76

Gene sequence:

>1173_bases
ATGCCAAAACAGACCGGAAACGCAAGGAATCCCTTTGTCCTTCTAGCGCTCTTCATCCTGGTGTGCAGCGGCGGCTGCGC
GACATACCCCATCAGTCACGATAAGGCCGTGCCGGTGGCGCGAGGGGCGCTGTTCGAGTACCCGTATTTTCACGATCAGG
TAACGGGGATCGCGGTTTCCGGCCAAGGGAGGATTTTTGTGAATTTCCCCCGATGGGACAAGGATCCTCTCTATTCCGTG
GCCGAGGTGCTCCCCGACGGGTCGCTCCGCCCCTATCCCGATCATGGCTGGAACCGGTGGGGGGCCGATGAAACGGCCCA
TCCGGAGGCGCACTTCATCTGCGTGCAGAGCGTTTTTGTTGATCACAGCGACTTTCTCTGGATTCTCGACCCCGCATCCC
CTGCCTTCAATGGGGTGGTACCGGGCGGAGCGAAGCTTGTGAAGGTCAACCTGAAGACCGACCAGGTCGAGCGGGTAATC
CCCTTCGCCCCTTCGGCGGCACCCCATGAAAGCTACCTGAACGACGTGCGGATCGACCCTGAGGGCAACTTCGCCTTTAT
CACCGATTCGGGGAAAGGCGCCATCGTCGTGGTCGACCTGGAGAGCGGCAAGGCCCGAAGGCTCCTCTCCGGTCACCCTT
CAACCAAGGCGGAGCCAGGTTACGTGCCCGTGATCGAAGGGAAGGAGTTGCGGAACGAAGATGGCACGGTGCCCAAGATC
CACGCCGACGGAATCGCCCTCGACAGCCGGGGGGAGTACCTCTACTACCACGCTCTGGTTGGCCGTACCCTCTATCGCAT
CAGGACTTCCTTCCTGAAAGACCCGTCGCTGCCTGAGAAGGATCTGGAGAACCACGTGGAGCGGATAGCGGAAACGGGAG
CCGCGGACGGGATGCTCATGGATGCCCAGGACAACCTCTACCTGACCGCCCTGGAAGAGAACGCCGTCAAGCGGTACCGG
CCGTCGGAACCGACCCTGAATACCATTATCCAGGGTGGCTTGCACTGGCCGGACTCCCTGGCCATCTCTCCCGATAACTA
CCTCTACGTTACCGATTCACAGATAAACCTGGCGCCCCGCTTCAATCACGGAAAGGATCTGCGGATCATCCCCTACAAGT
TTTTTAAGACGTGGCTTATGCCGTTTTCACATGATGGGTTGCTTCCCCCGTGA

Upstream 100 bases:

>100_bases
CGATGAGGGATCATTTGACTTGCCTGAAATCAGGGCTATACATTGAATTGCGCTGTTCATGCTGCTCCAGCAAGTCTGGA
TGGTAAAAGAGGGAGAAACC

Downstream 100 bases:

>100_bases
TACGGGAGGTGTGGCAGTACCTTTGTGCCGGGGAAAATCATCAGGTATGTCTGAATGGGGTTGATTGATGTCCCTTCAAG
AGCCCTCAAAGGAAGCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Gluconolactonase; Royal Jelly-Like Protein; Glyoxalase/Bleomycin Resistance Protein/Dioxygenase; Royal Jelly-Like Exported Protein; SMP-30/Gluconolactonase/LRE Family Protein; Yellow-Related Protein

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MPKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVSGQGRIFVNFPRWDKDPLYSV
AEVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFVDHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVI
PFAPSAAPHESYLNDVRIDPEGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKI
HADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLMDAQDNLYLTALEENAVKRYR
PSEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPRFNHGKDLRIIPYKFFKTWLMPFSHDGLLPP

Sequences:

>Translated_390_residues
MPKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVSGQGRIFVNFPRWDKDPLYSV
AEVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFVDHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVI
PFAPSAAPHESYLNDVRIDPEGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKI
HADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLMDAQDNLYLTALEENAVKRYR
PSEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPRFNHGKDLRIIPYKFFKTWLMPFSHDGLLPP
>Mature_389_residues
PKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVSGQGRIFVNFPRWDKDPLYSVA
EVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFVDHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVIP
FAPSAAPHESYLNDVRIDPEGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKIH
ADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLMDAQDNLYLTALEENAVKRYRP
SEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPRFNHGKDLRIIPYKFFKTWLMPFSHDGLLPP

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43270; Mature: 43139

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVS
CCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCCCEECCCCCCCCEEEEEEC
GQGRIFVNFPRWDKDPLYSVAEVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFV
CCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHEEE
DHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVIPFAPSAAPHESYLNDVRIDP
CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHCEEECC
EGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKI
CCCEEEEEECCCCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCCEE
HADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLM
ECCCEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEE
DAQDNLYLTALEENAVKRYRPSEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPR
ECCCCEEEEEECCCHHHHCCCCCCCHHHHHHCCCCCCCCEEECCCCEEEEECCEEEEEEC
FNHGKDLRIIPYKFFKTWLMPFSHDGLLPP
CCCCCCEEEEHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PKQTGNARNPFVLLALFILVCSGGCATYPISHDKAVPVARGALFEYPYFHDQVTGIAVS
CCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCCCEECCCCCCCCEEEEEEC
GQGRIFVNFPRWDKDPLYSVAEVLPDGSLRPYPDHGWNRWGADETAHPEAHFICVQSVFV
CCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHEEE
DHSDFLWILDPASPAFNGVVPGGAKLVKVNLKTDQVERVIPFAPSAAPHESYLNDVRIDP
CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHCEEECC
EGNFAFITDSGKGAIVVVDLESGKARRLLSGHPSTKAEPGYVPVIEGKELRNEDGTVPKI
CCCEEEEEECCCCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCCEE
HADGIALDSRGEYLYYHALVGRTLYRIRTSFLKDPSLPEKDLENHVERIAETGAADGMLM
ECCCEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEE
DAQDNLYLTALEENAVKRYRPSEPTLNTIIQGGLHWPDSLAISPDNYLYVTDSQINLAPR
ECCCCEEEEEECCCHHHHCCCCCCCHHHHHHCCCCCCCCEEECCCCEEEEECCEEEEEEC
FNHGKDLRIIPYKFFKTWLMPFSHDGLLPP
CCCCCCEEEEHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA