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The map label for this gene is 78223643

Identifier: 78223643

GI number: 78223643

Start: 2764085

End: 2764897

Strand: Reverse

Name: 78223643

Synonym: Gmet_2440

Alternate gene names: NA

Gene position: 2764897-2764085 (Counterclockwise)

Preceding gene: 78223644

Following gene: 78223642

Centisome position: 69.17

GC content: 65.07

Gene sequence:

>813_bases
ATGGCACGCATTGAAACAGCACTCCGCGACCTGAACCGTATCGACCTCCTGGCCGGCGGCGATTCGTCCATCCACCGGCT
CGACCCCCGGGCCAAGGTTCTCGTCACCCTCGTGTATATCATTACGGTGGTTTCCTTCAGCCGTTACGAGATTTCGGGCC
TCATCCCCTTTGCGATCTTTCCGCTGGCGATGGTTGCCGTCAGCGGGCTCCCTCCGGAGATCGTGACTCGGAAGCTCCTG
CTGGTCCTCCCCTTTGCCGCCCTGGTGGGTCTCTTCAATCCCCTGTTCGACCGGGAACCGTTGCTGGCCCTCGGTTCCCT
GGCGGTGTCCGGGGGATGGGTGTCGTTTCTGTCGATCATCCTTCGCGCCGCGCTCACCGTGGGGGCCGCCCTGGTGCTGG
TGGCCGTGACCGGCTTTACCGGGGTCTGCCTGGCGCTCCAGCGGTTCGGAGTGCCCCGGGCCTTCGTGGTGCAGCTTCTC
TTCCTCTACCGCTATATCTTCGTCCTGGGGGACGAGGGGATACGGATGTCCCGGGCCAGGGAGCTGCGTTCCTTCGCCGG
GCGGGGGATGGGTCTCAAGGCCTACGGCTCCCTGGTGGGGAGCCTCCTTCTCCGCACCTGGGACCGGGCCGAGCGGATCC
ACATGGCCATGCTTTCCCGGGGGTTCCGGGGGGAATTCCACGTGCGGCGCGAGTGCTCTTTCGGACGGCGCGAGCTAGCC
TTCACGGCAGGGTGGTGTCTCCTCTTCATGCTTCTGCGCTTCGTCAACGTGCCGCACCTGATCGGCGTGCTGGTAACGGG
AGTCTTCCCATGA

Upstream 100 bases:

>100_bases
CGGTCTGACCCTGGTGATGGCCTTTGCGGTCGGCTTCTTGTTGCGCCGTCGCGCCGCATCGTGATTCCACCGCGGCTCCG
TCCGGCCCCCTTTCTCTCCC

Downstream 100 bases:

>100_bases
GTCATCATATCGTCGAGGTCAAGGATCTCCGCCATTCATACCCCGACGGCACCGAGGCCCTTCGGGGGGTTTCCTTCACC
ATCCACCACGGGGAATCGGT

Product: cobalt ABC transporter CbiQ, permease subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MARIETALRDLNRIDLLAGGDSSIHRLDPRAKVLVTLVYIITVVSFSRYEISGLIPFAIFPLAMVAVSGLPPEIVTRKLL
LVLPFAALVGLFNPLFDREPLLALGSLAVSGGWVSFLSIILRAALTVGAALVLVAVTGFTGVCLALQRFGVPRAFVVQLL
FLYRYIFVLGDEGIRMSRARELRSFAGRGMGLKAYGSLVGSLLLRTWDRAERIHMAMLSRGFRGEFHVRRECSFGRRELA
FTAGWCLLFMLLRFVNVPHLIGVLVTGVFP

Sequences:

>Translated_270_residues
MARIETALRDLNRIDLLAGGDSSIHRLDPRAKVLVTLVYIITVVSFSRYEISGLIPFAIFPLAMVAVSGLPPEIVTRKLL
LVLPFAALVGLFNPLFDREPLLALGSLAVSGGWVSFLSIILRAALTVGAALVLVAVTGFTGVCLALQRFGVPRAFVVQLL
FLYRYIFVLGDEGIRMSRARELRSFAGRGMGLKAYGSLVGSLLLRTWDRAERIHMAMLSRGFRGEFHVRRECSFGRRELA
FTAGWCLLFMLLRFVNVPHLIGVLVTGVFP
>Mature_269_residues
ARIETALRDLNRIDLLAGGDSSIHRLDPRAKVLVTLVYIITVVSFSRYEISGLIPFAIFPLAMVAVSGLPPEIVTRKLLL
VLPFAALVGLFNPLFDREPLLALGSLAVSGGWVSFLSIILRAALTVGAALVLVAVTGFTGVCLALQRFGVPRAFVVQLLF
LYRYIFVLGDEGIRMSRARELRSFAGRGMGLKAYGSLVGSLLLRTWDRAERIHMAMLSRGFRGEFHVRRECSFGRRELAF
TAGWCLLFMLLRFVNVPHLIGVLVTGVFP

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339
- InterPro:   IPR012809 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 29764; Mature: 29633

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIETALRDLNRIDLLAGGDSSIHRLDPRAKVLVTLVYIITVVSFSRYEISGLIPFAIF
CCHHHHHHHHHHHHEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
PLAMVAVSGLPPEIVTRKLLLVLPFAALVGLFNPLFDREPLLALGSLAVSGGWVSFLSII
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH
LRAALTVGAALVLVAVTGFTGVCLALQRFGVPRAFVVQLLFLYRYIFVLGDEGIRMSRAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ELRSFAGRGMGLKAYGSLVGSLLLRTWDRAERIHMAMLSRGFRGEFHVRRECSFGRRELA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCHHHHH
FTAGWCLLFMLLRFVNVPHLIGVLVTGVFP
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ARIETALRDLNRIDLLAGGDSSIHRLDPRAKVLVTLVYIITVVSFSRYEISGLIPFAIF
CHHHHHHHHHHHHEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
PLAMVAVSGLPPEIVTRKLLLVLPFAALVGLFNPLFDREPLLALGSLAVSGGWVSFLSII
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH
LRAALTVGAALVLVAVTGFTGVCLALQRFGVPRAFVVQLLFLYRYIFVLGDEGIRMSRAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ELRSFAGRGMGLKAYGSLVGSLLLRTWDRAERIHMAMLSRGFRGEFHVRRECSFGRRELA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCHHHHH
FTAGWCLLFMLLRFVNVPHLIGVLVTGVFP
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]