| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is kdpC
Identifier: 78223638
GI number: 78223638
Start: 2757704
End: 2758273
Strand: Direct
Name: kdpC
Synonym: Gmet_2435
Alternate gene names: 78223638
Gene position: 2757704-2758273 (Clockwise)
Preceding gene: 78223637
Following gene: 78223639
Centisome position: 68.99
GC content: 59.47
Gene sequence:
>570_bases ATGAACGACATAAAACCGGCTATTATGATGGTACTCGTCTTTACCATCATCTGCGGCGGTATCTATCCGGCGGTGGTTAC CGGGATTGCCCAGGCCGTATTTCCAAAAGAGGCCACAGGGAGCTTCATCACCGACCGGAGTGGCCGCGAGATCGGATCGG CACTCATCGGCCAGCCCTTCTCCGATTCGAAGTATTTCTGGCCCCGCCCGTCGGCAACCACTGACTTCGGCTACAACCCG GCCGCTTCCGGCGGCTCCAACTCCGGTCCGACCAATCCTGACTACCTGAAGACAGTGGCCAACCGGGTCAAGGCACTCAA AGATACGGGCGTCTCCACCGGAATCCCGACCGACTTGGTTCAGGCCTCGGCCAGCGGCCTCGATCCCCATATCTCGCCGG AAGCGGCAAGCGTGCAGATTCCCCGGGTCGCCAAGGCGCGGGGCATGATGGAGGACAAGGTGAGGAGGCTCGTATCCGGC CACACCGAAGATCGTCAATTCGGAATTATTGGAAGTCCGCGGGTGAATGTGCTGGCACTGAATCTGGCATTGGATAGGTT GGCCCCATGA
Upstream 100 bases:
>100_bases ACCTCCTCATCTACGGGGCCGGAGGGATCATCGCGCCGTTCGTGGGGATCAAGGGGATCGACCTGGTGATCGGGATGTTT GCATAAGGAAAGGGGAAACC
Downstream 100 bases:
>100_bases CCGATATCAACGACGAAAGACGCCCCTCGCCGGAGGCGCTTTTGAGGCTCGCCCAGAAGGAAGAGGCTCAAGCGGAACAG GGAAGGCTGAAGATCTTTCT
Product: K+ transporting ATPase subunit KdpC
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] C chain; Potassium-binding and translocating subunit C; Potassium-translocating ATPase C chain
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNDIKPAIMMVLVFTIICGGIYPAVVTGIAQAVFPKEATGSFITDRSGREIGSALIGQPFSDSKYFWPRPSATTDFGYNP AASGGSNSGPTNPDYLKTVANRVKALKDTGVSTGIPTDLVQASASGLDPHISPEAASVQIPRVAKARGMMEDKVRRLVSG HTEDRQFGIIGSPRVNVLALNLALDRLAP
Sequences:
>Translated_189_residues MNDIKPAIMMVLVFTIICGGIYPAVVTGIAQAVFPKEATGSFITDRSGREIGSALIGQPFSDSKYFWPRPSATTDFGYNP AASGGSNSGPTNPDYLKTVANRVKALKDTGVSTGIPTDLVQASASGLDPHISPEAASVQIPRVAKARGMMEDKVRRLVSG HTEDRQFGIIGSPRVNVLALNLALDRLAP >Mature_189_residues MNDIKPAIMMVLVFTIICGGIYPAVVTGIAQAVFPKEATGSFITDRSGREIGSALIGQPFSDSKYFWPRPSATTDFGYNP AASGGSNSGPTNPDYLKTVANRVKALKDTGVSTGIPTDLVQASASGLDPHISPEAASVQIPRVAKARGMMEDKVRRLVSG HTEDRQFGIIGSPRVNVLALNLALDRLAP
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex
COG id: COG2156
COG function: function code P; K+-transporting ATPase, c chain
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpC family
Homologues:
Organism=Escherichia coli, GI1786913, Length=190, Percent_Identity=43.6842105263158, Blast_Score=150, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATKC_GEOMG (Q39SW4)
Other databases:
- EMBL: CP000148 - RefSeq: YP_385385.1 - STRING: Q39SW4 - GeneID: 3738450 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_2435 - NMPDR: fig|269799.3.peg.2876 - eggNOG: COG2156 - HOGENOM: HBG724180 - OMA: RYFWGRP - PhylomeDB: Q39SW4 - ProtClustDB: CLSK828854 - BioCyc: GMET269799:GMET_2435-MONOMER - HAMAP: MF_00276 - InterPro: IPR003820 - PIRSF: PIRSF001296 - TIGRFAMs: TIGR00681
Pfam domain/function: PF02669 KdpC
EC number: =3.6.3.12
Molecular weight: Translated: 19956; Mature: 19956
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xec0de98)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIKPAIMMVLVFTIICGGIYPAVVTGIAQAVFPKEATGSFITDRSGREIGSALIGQPF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC SDSKYFWPRPSATTDFGYNPAASGGSNSGPTNPDYLKTVANRVKALKDTGVSTGIPTDLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH QASASGLDPHISPEAASVQIPRVAKARGMMEDKVRRLVSGHTEDRQFGIIGSPRVNVLAL HHHHCCCCCCCCCCCCCEECCHHHHHHCHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEH NLALDRLAP HHHHHHHCH >Mature Secondary Structure MNDIKPAIMMVLVFTIICGGIYPAVVTGIAQAVFPKEATGSFITDRSGREIGSALIGQPF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC SDSKYFWPRPSATTDFGYNPAASGGSNSGPTNPDYLKTVANRVKALKDTGVSTGIPTDLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH QASASGLDPHISPEAASVQIPRVAKARGMMEDKVRRLVSGHTEDRQFGIIGSPRVNVLAL HHHHCCCCCCCCCCCCCEECCHHHHHHCHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEH NLALDRLAP HHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA