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The map label for this gene is 78223600

Identifier: 78223600

GI number: 78223600

Start: 2708729

End: 2709391

Strand: Reverse

Name: 78223600

Synonym: Gmet_2397

Alternate gene names: NA

Gene position: 2709391-2708729 (Counterclockwise)

Preceding gene: 78223603

Following gene: 78223599

Centisome position: 67.78

GC content: 51.58

Gene sequence:

>663_bases
ATGCAACTGTTCACAAGTACTGTTGGAAGAAAAGTTCTGATGGCGATCACCGGCCAGTTTCTGGTGCTGTTTATTATCGT
CCATCTGCTTGGTAACTCCTCCATCTTCATTCCGGGCGGCATCAACGCATATGCCGAGCACCTCCACGCACTTCCCCCCC
TGGTCTGGGGTTTTCGCCTTGTTATACTCTGTGTGGCGATCATCCATATTTTCTTCGGCGTCCAGTTGAGCCTTGAAAAC
CGTGCCGCCAACCCCGACACATACGCGGTCAAGAATCTCAAGGAGGCTACCCTGTCGAGCACAAGTATGCTCTACACCGG
GCTTCTTCTGTTGGCATTCATTCTTTACCATCTCCTCCAATTCACTGTACGTGCTACTCCCGATATAAAGGTTGGAGTAG
ACGCTCTCGGTCGTGTCGATGTCTTTGGCATGGTGACCAACAGCTTCTCCCACGGCATCATCGCAGTTCTCTATATCGCC
GCGATGGTGGTGCTGTTCCTTCATCTCTCCCACGGCATCCAGAGCTTCTTCCAGACGATGGGATGGAACAATCACAAATC
TCGCCCGGTTTTCTCCACGATTGGTAAGGTCGCTGCGGTTGTGTTTCTCCTCGGCTATGCGTCCATTCCTTTTGTCATCG
TTACCGGCATTCTGAAAGGTTAG

Upstream 100 bases:

>100_bases
GTTTTCTCCGTAAGGCCGCTTGAGTCTTTCGTTAAAGTTGAGATTTCAGGTGGCGATGTTTCGAATTCTAAACAACGAAT
ACGCGCAAAGGGAAATCATT

Downstream 100 bases:

>100_bases
GGGGTTCAAGTGATACTCGACGGAAAATGTCCGACTGGACCAATTGAGAAAACATGGGACAAGCACCGCTTCGACATGAA
GCTGGTTAACCCCTCCAACA

Product: succinate dehydrogenase subunit C

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Subunit C; Cytochrome B Subunit; Succinate Dehydrogenase Subunit; Fumarate Reductase Cytochrome B Subunit; Fumarate Reductase Transmembrane Cytochrome B Subunit; Succinate Dehydrogenase Cytochrome Subunit; SuccinateQuinone Oxidoreductase-Like Protein; Succinate Dehydrogenase/Fumarate Reductase Cytochrome; Succinate Dehydrogenase Cytochrome Subunit B; Succinate Dehydrogenease Cytochrome B Subunit; Succinate Dehydrogenase Cytochrome B Subunit SdhC; Succinate Dehydrogenase Cytochrome; Succinate Dehydrogenase Subunit C/Fumarate Reductase

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MQLFTSTVGRKVLMAITGQFLVLFIIVHLLGNSSIFIPGGINAYAEHLHALPPLVWGFRLVILCVAIIHIFFGVQLSLEN
RAANPDTYAVKNLKEATLSSTSMLYTGLLLLAFILYHLLQFTVRATPDIKVGVDALGRVDVFGMVTNSFSHGIIAVLYIA
AMVVLFLHLSHGIQSFFQTMGWNNHKSRPVFSTIGKVAAVVFLLGYASIPFVIVTGILKG

Sequences:

>Translated_220_residues
MQLFTSTVGRKVLMAITGQFLVLFIIVHLLGNSSIFIPGGINAYAEHLHALPPLVWGFRLVILCVAIIHIFFGVQLSLEN
RAANPDTYAVKNLKEATLSSTSMLYTGLLLLAFILYHLLQFTVRATPDIKVGVDALGRVDVFGMVTNSFSHGIIAVLYIA
AMVVLFLHLSHGIQSFFQTMGWNNHKSRPVFSTIGKVAAVVFLLGYASIPFVIVTGILKG
>Mature_220_residues
MQLFTSTVGRKVLMAITGQFLVLFIIVHLLGNSSIFIPGGINAYAEHLHALPPLVWGFRLVILCVAIIHIFFGVQLSLEN
RAANPDTYAVKNLKEATLSSTSMLYTGLLLLAFILYHLLQFTVRATPDIKVGVDALGRVDVFGMVTNSFSHGIIAVLYIA
AMVVLFLHLSHGIQSFFQTMGWNNHKSRPVFSTIGKVAAVVFLLGYASIPFVIVTGILKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 24030; Mature: 24030

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFTSTVGRKVLMAITGQFLVLFIIVHLLGNSSIFIPGGINAYAEHLHALPPLVWGFRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCHHHHHHHH
VILCVAIIHIFFGVQLSLENRAANPDTYAVKNLKEATLSSTSMLYTGLLLLAFILYHLLQ
HHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTVRATPDIKVGVDALGRVDVFGMVTNSFSHGIIAVLYIAAMVVLFLHLSHGIQSFFQTM
HHHHCCCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWNNHKSRPVFSTIGKVAAVVFLLGYASIPFVIVTGILKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLFTSTVGRKVLMAITGQFLVLFIIVHLLGNSSIFIPGGINAYAEHLHALPPLVWGFRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCHHHHHHHH
VILCVAIIHIFFGVQLSLENRAANPDTYAVKNLKEATLSSTSMLYTGLLLLAFILYHLLQ
HHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTVRATPDIKVGVDALGRVDVFGMVTNSFSHGIIAVLYIAAMVVLFLHLSHGIQSFFQTM
HHHHCCCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWNNHKSRPVFSTIGKVAAVVFLLGYASIPFVIVTGILKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA