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The map label for this gene is yisS [H]

Identifier: 78223555

GI number: 78223555

Start: 2659917

End: 2660849

Strand: Reverse

Name: yisS [H]

Synonym: Gmet_2352

Alternate gene names: 78223555

Gene position: 2660849-2659917 (Counterclockwise)

Preceding gene: 78223556

Following gene: 78223554

Centisome position: 66.56

GC content: 60.66

Gene sequence:

>933_bases
ATGACGGAAAAGATTCGGACCGCGGTGATCGGCGTTGGCTATCTGGGCCTCTTCCACGCGGAGAAATTCGCCCAGCTCCC
TGAGTCGGATCTGATCGGGGTGGTTGATACCAGCAGGCCCCGGGCGGAGGAGGTGGCCGCCAAGGTGGGGACGGCCCCCT
ACACCGATTACCGGGAGCTGCTCGACAAGGTCGACGCCGTCAGCATCGTGGTGCCGACCCAGTTCCACTTCGAGGTGGCG
CGGGCGTTTCTGGAACGGGGCGTTCACGTCCTCCTGGAGAAACCGGTTACGACCACGGTCGAAGAGGCCGACGAACTCAT
CCGGCTTGCCGAAGATAACGGTGTGGTCTTCCAGGTGGGGCACCTTGAGCGGTTCAACCCGGTGATCGTGGGCCTCAAGG
GACTTCTGACCGGGCCCCGCTTCATTGAGTCGATCCGGATCGCTCCCTTCAAGCCCCGGGGAACCGATGTGAACGTGGTT
CTTGATCTGATGATCCATGACATCGACATCATCCAGACCATTGTCGGCTCGCCGGTGAAGCAGATCAGCTCCATTGGCGC
CCCGGTCTTCACCGACGAGGAGGATATCGCCAACGCCCGCATCCAGTTCGAGAACGGTTGCGTGGCCAACGTCACGGCCA
GCCGCATCAGCCTCAAGAGCGAGCGGAAGATGCGGATATTCCAGGCCGACTCCTACATCTCCGTCGACTTCCAGAACAAG
AAGCTGGCGGTGTTCCGCAAGGGGAGCGGAGAAATGCTTCCCGGTGTTCCCAAGGTTGACATGGAGGAAAAGTCGTTTGA
TCAGGGAGATGCCCTGAAGTCCGAAATAGCCTCGTTCCTGGAGTGCGTCCGGACGGGCGCAAAGCCGGTGGTATCGGGCC
AGGACGGCAAGCGGGCGCTGGAAACGGCGATAAAGATCAGCAAAAAACTGTGA

Upstream 100 bases:

>100_bases
TCGACGAGGCCATTGCCCGCATCCGGGAAGAGGTCCCCATGTCTCCCGAGATCGTTCACTTCATCGAGTTCGCACAAAAA
TCGGAAAGGGGTATCTGCCG

Downstream 100 bases:

>100_bases
GGGAAACCATGAATATTCCGATGGTGGATTTGAAGGTGCAGTATCATGCAATAAAGGAGGAGATCGACAGGGGCATTCTG
GAAGCCCTTGAAAAGACCCA

Product: oxidoreductase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTEKIRTAVIGVGYLGLFHAEKFAQLPESDLIGVVDTSRPRAEEVAAKVGTAPYTDYRELLDKVDAVSIVVPTQFHFEVA
RAFLERGVHVLLEKPVTTTVEEADELIRLAEDNGVVFQVGHLERFNPVIVGLKGLLTGPRFIESIRIAPFKPRGTDVNVV
LDLMIHDIDIIQTIVGSPVKQISSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYISVDFQNK
KLAVFRKGSGEMLPGVPKVDMEEKSFDQGDALKSEIASFLECVRTGAKPVVSGQDGKRALETAIKISKKL

Sequences:

>Translated_310_residues
MTEKIRTAVIGVGYLGLFHAEKFAQLPESDLIGVVDTSRPRAEEVAAKVGTAPYTDYRELLDKVDAVSIVVPTQFHFEVA
RAFLERGVHVLLEKPVTTTVEEADELIRLAEDNGVVFQVGHLERFNPVIVGLKGLLTGPRFIESIRIAPFKPRGTDVNVV
LDLMIHDIDIIQTIVGSPVKQISSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYISVDFQNK
KLAVFRKGSGEMLPGVPKVDMEEKSFDQGDALKSEIASFLECVRTGAKPVVSGQDGKRALETAIKISKKL
>Mature_309_residues
TEKIRTAVIGVGYLGLFHAEKFAQLPESDLIGVVDTSRPRAEEVAAKVGTAPYTDYRELLDKVDAVSIVVPTQFHFEVAR
AFLERGVHVLLEKPVTTTVEEADELIRLAEDNGVVFQVGHLERFNPVIVGLKGLLTGPRFIESIRIAPFKPRGTDVNVVL
DLMIHDIDIIQTIVGSPVKQISSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYISVDFQNKK
LAVFRKGSGEMLPGVPKVDMEEKSFDQGDALKSEIASFLECVRTGAKPVVSGQDGKRALETAIKISKKL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=196, Percent_Identity=31.1224489795918, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787574, Length=125, Percent_Identity=33.6, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34050; Mature: 33918

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKIRTAVIGVGYLGLFHAEKFAQLPESDLIGVVDTSRPRAEEVAAKVGTAPYTDYREL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHH
LDKVDAVSIVVPTQFHFEVARAFLERGVHVLLEKPVTTTVEEADELIRLAEDNGVVFQVG
HHHCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEC
HLERFNPVIVGLKGLLTGPRFIESIRIAPFKPRGTDVNVVLDLMIHDIDIIQTIVGSPVK
CCCCCCHHEEEHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
QISSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYISVDFQNK
HHHHCCCCCCCCCHHHCCCEEEECCCEEEECHHHHHHHCCCCCEEEEECCCEEEEEECCC
KLAVFRKGSGEMLPGVPKVDMEEKSFDQGDALKSEIASFLECVRTGAKPVVSGQDGKRAL
EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH
ETAIKISKKL
HHHHHHHCCC
>Mature Secondary Structure 
TEKIRTAVIGVGYLGLFHAEKFAQLPESDLIGVVDTSRPRAEEVAAKVGTAPYTDYREL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHH
LDKVDAVSIVVPTQFHFEVARAFLERGVHVLLEKPVTTTVEEADELIRLAEDNGVVFQVG
HHHCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEC
HLERFNPVIVGLKGLLTGPRFIESIRIAPFKPRGTDVNVVLDLMIHDIDIIQTIVGSPVK
CCCCCCHHEEEHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
QISSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYISVDFQNK
HHHHCCCCCCCCCHHHCCCEEEECCCEEEECHHHHHHHCCCCCEEEEECCCEEEEEECCC
KLAVFRKGSGEMLPGVPKVDMEEKSFDQGDALKSEIASFLECVRTGAKPVVSGQDGKRAL
EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH
ETAIKISKKL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]