Click here to switch to the map view.

The map label for this gene is wcaA [H]

Identifier: 78223539

GI number: 78223539

Start: 2643150

End: 2644007

Strand: Reverse

Name: wcaA [H]

Synonym: Gmet_2336

Alternate gene names: 78223539

Gene position: 2644007-2643150 (Counterclockwise)

Preceding gene: 78223540

Following gene: 78223538

Centisome position: 66.14

GC content: 50.23

Gene sequence:

>858_bases
ATGATTGATGATTTGCTTAATTTTTTTAACAGCTTCAATGTGGTGAAAAATTATAAGCTGATAAATCAGCTCAAAAATGA
AGTTGACACGCTCAAGTCGAGGCTGGACATTCCCCGGGAATTGCTTGACGGTTTTTATGCTGACAGAAATTCCCGCGAAT
ACCGTGAGGTCTATGAGAAAGATGCGCCCCTTGTGACGGTGTGCATCGGCACGTACAATCGCGGCAAGTTACTGGTGGAG
CGTTCTGTTCGGTCTGTTCTCGAACAGTCTTACGGCAACATAGAACTGATTGTGGTCGGTGATTGCTGTACCGACGACAC
ACCCCGGCTTGTACAGGGAATAACGGATCCCCGTTTTCGTTTCATCAACCTGCCGGAACGGGGGAACTATCCGGAGAATC
CCCTCCACCGATGGTGTGTTGCCGGCACGGTCCCGTTCAACTACGCACTTTCGCAGGCACGGGGCGACTTTATTACCCAC
CTCGACGACGATGACGAATTCGTCCCCGACCGGATTGAAAAGCTGGTCAAATTCATCCAGCGGGAGAAGGCCGATCTGGT
TTGGCACCCCTTCTGGTATGAGCGCTCAAACGGGCGCTGGGCAATGAGAAAAGCCCAGGAATTTTCAGGAGGGAAGGTCA
CCACATCGTCTATTTTTTACCACCGGTGGTTTACCGCCGTCCCGTGGGATATTGAGGCCTACAGATATCAGGAACCTGGT
GACTGGAACAGGCTCCGTAAGATCAAGTATCTCGGGGCGAGAGTCGCACGGTATCCGGAGCCGTTACTGAGGCATTATTG
TGAACGGAATCAGGAATCTCTTTCATCAAGAACTATTCAAACTCGTAATACTAAATGA

Upstream 100 bases:

>100_bases
AAAGGACGTTTTTTACGCTGACGACACCCATTGGAACTGGAAGGCGTCCGAGGCGATATTCTCCAGGCAGTTGTTCCGAT
GAGTTTGTGGAAGGTGCGCA

Downstream 100 bases:

>100_bases
AAAAAGGAGTACGGTATGCATGTAAGAACAATTGTAAATAGAATTATTAGTCGTTATGGCTATGAAATAACAAAAATTGA
TAAATTTAAACAATACCTAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MIDDLLNFFNSFNVVKNYKLINQLKNEVDTLKSRLDIPRELLDGFYADRNSREYREVYEKDAPLVTVCIGTYNRGKLLVE
RSVRSVLEQSYGNIELIVVGDCCTDDTPRLVQGITDPRFRFINLPERGNYPENPLHRWCVAGTVPFNYALSQARGDFITH
LDDDDEFVPDRIEKLVKFIQREKADLVWHPFWYERSNGRWAMRKAQEFSGGKVTTSSIFYHRWFTAVPWDIEAYRYQEPG
DWNRLRKIKYLGARVARYPEPLLRHYCERNQESLSSRTIQTRNTK

Sequences:

>Translated_285_residues
MIDDLLNFFNSFNVVKNYKLINQLKNEVDTLKSRLDIPRELLDGFYADRNSREYREVYEKDAPLVTVCIGTYNRGKLLVE
RSVRSVLEQSYGNIELIVVGDCCTDDTPRLVQGITDPRFRFINLPERGNYPENPLHRWCVAGTVPFNYALSQARGDFITH
LDDDDEFVPDRIEKLVKFIQREKADLVWHPFWYERSNGRWAMRKAQEFSGGKVTTSSIFYHRWFTAVPWDIEAYRYQEPG
DWNRLRKIKYLGARVARYPEPLLRHYCERNQESLSSRTIQTRNTK
>Mature_285_residues
MIDDLLNFFNSFNVVKNYKLINQLKNEVDTLKSRLDIPRELLDGFYADRNSREYREVYEKDAPLVTVCIGTYNRGKLLVE
RSVRSVLEQSYGNIELIVVGDCCTDDTPRLVQGITDPRFRFINLPERGNYPENPLHRWCVAGTVPFNYALSQARGDFITH
LDDDDEFVPDRIEKLVKFIQREKADLVWHPFWYERSNGRWAMRKAQEFSGGKVTTSSIFYHRWFTAVPWDIEAYRYQEPG
DWNRLRKIKYLGARVARYPEPLLRHYCERNQESLSSRTIQTRNTK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoO [H]

Homologues:

Organism=Escherichia coli, GI1788372, Length=136, Percent_Identity=33.8235294117647, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 33750; Mature: 33750

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDDLLNFFNSFNVVKNYKLINQLKNEVDTLKSRLDIPRELLDGFYADRNSREYREVYEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHC
DAPLVTVCIGTYNRGKLLVERSVRSVLEQSYGNIELIVVGDCCTDDTPRLVQGITDPRFR
CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCCCCCCEE
FINLPERGNYPENPLHRWCVAGTVPFNYALSQARGDFITHLDDDDEFVPDRIEKLVKFIQ
EEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHH
REKADLVWHPFWYERSNGRWAMRKAQEFSGGKVTTSSIFYHRWFTAVPWDIEAYRYQEPG
HHCCCEEECCCEEECCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCHHEEECCCC
DWNRLRKIKYLGARVARYPEPLLRHYCERNQESLSSRTIQTRNTK
CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIDDLLNFFNSFNVVKNYKLINQLKNEVDTLKSRLDIPRELLDGFYADRNSREYREVYEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHC
DAPLVTVCIGTYNRGKLLVERSVRSVLEQSYGNIELIVVGDCCTDDTPRLVQGITDPRFR
CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCCCCCCEE
FINLPERGNYPENPLHRWCVAGTVPFNYALSQARGDFITHLDDDDEFVPDRIEKLVKFIQ
EEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHH
REKADLVWHPFWYERSNGRWAMRKAQEFSGGKVTTSSIFYHRWFTAVPWDIEAYRYQEPG
HHCCCEEECCCEEECCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCHHEEECCCC
DWNRLRKIKYLGARVARYPEPLLRHYCERNQESLSSRTIQTRNTK
CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]